KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:54 2014 Check: 00 .. Name: ENSP00000262133/1-1139 Len: 1141 Check: 5271 Weight: 1.00 Name: ENSBTAP00000021613/1-1140 Len: 1141 Check: 2653 Weight: 1.00 Name: BACU001869/1-1026 Len: 1141 Check: 5581 Weight: 1.00 Name: bmy_02348T0/1-1117 Len: 1141 Check: 9267 Weight: 1.00 Name: ENSTTRP00000012047/1-1140 Len: 1141 Check: 7865 Weight: 1.00 // 1 50 ENSP00000262133/1-1139 MPSGGDQSPP PPPPP-PAAA ASDEEEEDDG EAEDAAPPAE SPTPQIQQRF ENSBTAP00000021613/1-1140 MPSGGDQSPP PPPPP-PAAA ASDEEEEDDG EAEDAAQPSR SPAPQTQQRF BACU001869/1-1026 MPSGGNQSPP PPPPPLPAAA ASDEEEGDDA EAEDAAQPAR SPAPQTQQRF bmy_02348T0/1-1117 MPSGGNQSPP PPPPPLPAAA ASDEEEEDDA EAEDAAQPAG SPAPQTQQRF ENSTTRP00000012047/1-1140 MQSGGNQSPP PPPPPLPAAA ASDEEEEEDA EAEDAAQSAR SPAPQTQQRF 51 100 ENSP00000262133/1-1139 DELCSRLNMD EAARAEAWDS YRSMSESYTL EGNDLHWLAC ALYVACRKSV ENSBTAP00000021613/1-1140 DELCSRLNMD EAARAEAWES YRSMSESYTL EGNDLHWLAC ALYVACRKSV BACU001869/1-1026 DELCSRLNMD EAARAEAWDS YRNMSESYTL EGNDLHWLAC ALYVACRKSV bmy_02348T0/1-1117 DELCSRLNMD EAARAEAWDS YRSMSESYTL EGNDLHWLAC ALYVACRKSV ENSTTRP00000012047/1-1140 DELCSRLNMD EAARAEAWDS YRSMSESYTL EGNDLHWLAC ALYVACRKSV 101 150 ENSP00000262133/1-1139 PTVSKGTVEG NYVSLTRILK CSEQSLIEFF NKMKKWEDMA NLPPHFRERT ENSBTAP00000021613/1-1140 PTVSKGTVEG NYVSLTRILR CSEQSLIEFF NKMKKWEDMA NLPPHFRERT BACU001869/1-1026 PTVSKGTVEG NYVSLTRILR CSEQR--TFL NILKR-SNLV N--------- bmy_02348T0/1-1117 PTVSKGTVEG NYVSLTRILR CSEQSLIEFF HKMKKWEDMA NLPTQFRERT ENSTTRP00000012047/1-1140 PTVSKGTVEG NYVSLTRILR CSEQSLIEFF HKMKKWEDMA NLPAQFRERT 151 200 ENSP00000262133/1-1139 ERLERNFTVS AVIFKKYEPI FQDIFKYPQE EQPRQQRGRK QRRQPCTVSE ENSBTAP00000021613/1-1140 ERLERNFTVS AVIFKKYEPI FQDIFKYPQE EQPRQQRGRK QRRQPCTVSE BACU001869/1-1026 ---------- ---------- --------KE EE-------- ---------- bmy_02348T0/1-1117 ERLERNFTVS AVIFKKYEPI FQDIFKYPQE EQPRQQRGRK QRRQPCTVSE ENSTTRP00000012047/1-1140 ERLERNFTVS AVIFKKYEPI FQDIFKYPQE EQPRQQRGRK QRRQPCTVSE 201 250 ENSP00000262133/1-1139 IFHFCWVLFI YAKGNFPMIS DDLVNSYHLL LCALDLVYGN ALQCSNRKEL ENSBTAP00000021613/1-1140 VFHFCWVLFI YAKGNFPMIS DDLVNSYHLL LCALDLVYGN ALQCSNRKEL BACU001869/1-1026 ---------- -NSGNFPMIS DDLVNSYHLL LCALDLVYGN ALQCSNRKEL bmy_02348T0/1-1117 VFHFCWVLFI YAKGNFPMIS DDLVNSYHLL LCALDLVYGN ALQCSNRKEL ENSTTRP00000012047/1-1140 VFHFCWVLFI YAKGNFPMIS DDLVNSYHLL LCALDLVYGN ALQCSNRKEL 251 300 ENSP00000262133/1-1139 VNPNFKGLSE DFHAKDSKPS SDPPCIIEKL CSLHDGLVLE AKGIKEHFWK ENSBTAP00000021613/1-1140 VNPNFKGLSE DFHAKDSKPS SDPPCVIEKL CSLHDGLVLE AKGIKEHFWK BACU001869/1-1026 VNPNFKGLSE DFHAKDSKPS SDPPCVIEKL CSLHDGLVLE AKGIKEHFWK bmy_02348T0/1-1117 VNPNFKGLSE DFHAKDSKPS SDPPCVIEKL CSLHDGLVLE AKGIKEHFWK ENSTTRP00000012047/1-1140 VNPNFKGLSE DFHAKDSKPS SDPPCVIEKL CSLHDGLVLE AKGIKEHFWK 301 350 ENSP00000262133/1-1139 PYIRKLYEKK LLKGKEENLT GFLEPGNFGE SFKAINKAYE EYVLSVGNLD ENSBTAP00000021613/1-1140 PYIRKLYEKK LLKGKEENLT GFLEPGNFGE SFKAINKAYE EYVLSVGNLD BACU001869/1-1026 PYIRKLFEKK LLKGKEENLT GFLEPGNFGE SFKAINKAYE EYVLSAGNLD bmy_02348T0/1-1117 PYIRKLYEKK LLKGKEENLT GFLEPGNFGE SFKAINKAYE EYVLSAGNLD ENSTTRP00000012047/1-1140 PYIRKLYEKK LLKGKEENLT GFLEPGNFGE SFKAINKAYE EYVLSVGNLD 351 400 ENSP00000262133/1-1139 ERIFLGEDAE EEIGTLSRCL NAGSGTETAE RVQMKNILQQ HFDKSKALRI ENSBTAP00000021613/1-1140 ERIFLGEDAE EEIGTLSRCL NTGSGAETAE RVQMKNILQQ HFDKSKALRV BACU001869/1-1026 ERIFLGEDAG EEIGTLARCL NTGSGTETAE RVQVKNILQQ HFDKSKALRI bmy_02348T0/1-1117 ERIFLGEDAG EEIGTLARCL NTGSGTETAE RVQVKNILQQ HFDKSKALRI ENSTTRP00000012047/1-1140 ERIFLGEDAE EEIGTLSRCL NTGSGTETAE RVQMKSILQQ HFDKSKALRI 401 450 ENSP00000262133/1-1139 STPLTGVRYI KENSPCVTPV STATHSLSRL HTMLTGLRNA PSEKLEQILR ENSBTAP00000021613/1-1140 STPLTGVRYI KDSSPCVTPV STATHSLSRL HTMLTGLRNA PSERLEQTLR BACU001869/1-1026 STPLTGVRYI KGNSPCVTPV STATHSLSRL HTMLTGLRNA PSEKLEQILR bmy_02348T0/1-1117 STPLTGVRYI KGNSPCVTPV STATHSLSRL HTMLTGLRNA PSEKLEQILR ENSTTRP00000012047/1-1140 STPLTGVRYI KGNSPCVTPV STATHSLSRL HTMLTGLRNA PSEKLEQILR 451 500 ENSP00000262133/1-1139 TCSRDPTQAI ANRLKEMFEI YSQHFQPDED FSNCAKEIAS KHFRFAEMLY ENSBTAP00000021613/1-1140 SCSRDPTQAI ANRLKEMYEI YSQHFQSEED GSNCAKDIAS KHFRFAEMLY BACU001869/1-1026 TCSRDPTQAI ANRLKEMYEI YSQHSQPDED ISNCAKEIAS KHFRFAEMLY bmy_02348T0/1-1117 TCSRDPTQAI ANRLKEMYEI YSQHSQPDED ISNCAKEIAS KHFRFAEMLY ENSTTRP00000012047/1-1140 TCSRDPTQAI ANRLKEMYEI YSQHSQPDED ISNCAKEIAS KHFRFAEMLY 501 550 ENSP00000262133/1-1139 YKVLESVIEQ EQKRLGDMDL SGILEQDAFH RSLLACCLEV VTFSYKPPGN ENSBTAP00000021613/1-1140 YKVLESVIEQ EQKRLGDMDL SGILEQDAFH RSLLACCLEV VTFSYKPPGN BACU001869/1-1026 YKVLESVIEQ EQKRLGDMDL S--------- ---------- ---------- bmy_02348T0/1-1117 YKVLESVIEQ EQKRLGDMDL SGILEQDAFH RSLLACCLEV VTFSYKPPGN ENSTTRP00000012047/1-1140 YKVLESVIEQ EQKRLGDMDL SGILEQDAFH RSLLACCLEV VTFSYKPPGN 551 600 ENSP00000262133/1-1139 FPFITEIFDV PLYHFYKVIE VFIRAEDGLC REVVKHLNQI EEQILDHLAW ENSBTAP00000021613/1-1140 FPFITEIFDV PLYHFYKVIE VFIRAEDGLC REVVKHLNQI EEQILDHLAW BACU001869/1-1026 ---------- -------VIE VFIRAEDGLC REVVKHLNQI EEQILDHLAW bmy_02348T0/1-1117 FPCITEIFDV PLYHFYKVIE VFIRAEDGLC REVVKHLNQI EEQILDHLAW ENSTTRP00000012047/1-1140 FPCITEIFDV PLYHFYKVIE VFIRAEDGLC REVVKHLNQI EEQILDHLAW 601 650 ENSP00000262133/1-1139 KPESPLWEKI RDNENRVPTC EEVMPPQNLE RADEICIAGS PLTPRRVTEV ENSBTAP00000021613/1-1140 KPESPLWDRI RDNENRVPTC EEVMPPQNLE RADEICIAGS PLTPRRVSEV BACU001869/1-1026 KPESPLWDRI RDNENRVPTC EEVMPPQNLE RADEICIAGS PLTPRRVSEV bmy_02348T0/1-1117 KPESPLWDRI RDNENRVPTC EEVMPPQNLE RADEICIAGS PLTPRRVSEV ENSTTRP00000012047/1-1140 KPESPLWDRI RDNENRVPTC EEVMPPQNLE RADEICIAGS PLTPRRVSEV 651 700 ENSP00000262133/1-1139 RADTGGLGRS ITSPTTLYDR YSSPPASTTR RRLFVENDSP SDGGTPGRMP ENSBTAP00000021613/1-1140 RADSGGLGRS ISSPTTLYDR YSSPTASSTR RRLFVENDSP TDGGTPGRTP BACU001869/1-1026 RADAGGLGRS ITSPTTLYDR YSSPTASSTR RRLFVENDSP TDGGTPGRIP bmy_02348T0/1-1117 RADAGGLGRS ITSPTTLYDR YSSPTASSTR RRLFVENDSP TDGGTPGRIP ENSTTRP00000012047/1-1140 RADAGGLGRS ITSPTTLYDR YSSPTASSTR RRLFVENDSP TDGGTPGRIP 701 750 ENSP00000262133/1-1139 PQPLVNAVPV QNVSGETVSV TPVPGQTLVT MATATVTANN GQTVTIPVQG ENSBTAP00000021613/1-1140 PQPLVNAVPV QNVAGEAVSV TPVPGQTLVT MATATVTANN GQTVTIPVQG BACU001869/1-1026 PQPLVNAVPV QNVSGEAVSV TPVPGQTLVT MATATVTANN GQTVTIPVQG bmy_02348T0/1-1117 AQPLVNAVPV QNVSGEAVSV TPVPGQTLVT MATATVTANN GQTVTIPVQG ENSTTRP00000012047/1-1140 PQPLVNAVPV QNVSGEAVSV TPVPGQTLVT MATATVTANN GQTVTIPVQG 751 800 ENSP00000262133/1-1139 IANENGGITF FPVQVNVGGQ AQAVTGSIQP LSAQALAGSL SSQQVTGTTL ENSBTAP00000021613/1-1140 IANENGGITF FPVQVNVGGQ AQAVTGSIQP LSAQALAGSL SSQQVTGTTL BACU001869/1-1026 IANENGGITF FPVQVNVGGQ AQAVTGSIQP LSAQALAGSL SSQQVTGTTL bmy_02348T0/1-1117 IANENGGITF FPVQVNVGGQ AQAVTGSIQP LSAQALAGSL SSQQVTGTTL ENSTTRP00000012047/1-1140 IANENGGITF FPVQVNVGGQ AQAVTGSIQP LSAQALAGSL SSQQVTGTTL 801 850 ENSP00000262133/1-1139 QVPGQVAIQQ ISPGGQQQKQ GQSVTSSSNR PRKTSSLSLF FRKVYHLAAV ENSBTAP00000021613/1-1140 QVPGQVAIQQ ISPGGPQQKQ GLPLTSSSIR PRKTSSLSLF FRKVYHLAGV BACU001869/1-1026 QVPGQVAIQQ ISPGGQQQKQ GLPLTSSNIR PRKTSSLSLF FRKVYHLAGV bmy_02348T0/1-1117 QVPGQVAIQQ ISPGGQQQKQ GLPLTSSNIR PRKTSSLSLF FRKVYHLAGV ENSTTRP00000012047/1-1140 QVPGQVAIQQ ISPGGQQQKQ GLPLTSSNIR PRKTSSLSLF FRKVYHLAGV 851 900 ENSP00000262133/1-1139 RLRDLCAKLD ISDELRKKIW TCFEFSIIQC PELMMDRHLD QLLMCAIYVM ENSBTAP00000021613/1-1140 RLRDLCAKLD ISDELRKKIW TCFEFSIIQC PELMMDRHLD QLLMCAIYVM BACU001869/1-1026 RLRDLCAKLD ISDELRKKIW TCFEFSIIQC PELMMDRHLD QLLMCAIYVM bmy_02348T0/1-1117 RLRDLCAKLD ISDELRKKIW TCFEFSIIQC PELMMDRHLD QLLMCAIYVM ENSTTRP00000012047/1-1140 RLRDLCAKLD ISDELRKKIW TCFEFSIIQC PELMMDRHLD QLLMCAIYVM 901 950 ENSP00000262133/1-1139 AKVTKEDKSF QNIMRCYRTQ PQARSQVYRS VLIKGKRKRR NSGSSDSRSH ENSBTAP00000021613/1-1140 AKVTKEDKSF QNIMRCYRTQ PQARSQVYRS VLIKGKRRRR NSGSSDSRSH BACU001869/1-1026 AKVTKEDKSF QNIMRCYRTQ PQARSQVYRS VLIKGKRKRR NSGSSDSRSH bmy_02348T0/1-1117 AK-------- ---------- ------VYRS VLIKGKRKRR NSGSSDSRSH ENSTTRP00000012047/1-1140 AKVTKEDKSF QNIMRCYRTQ PQARSQVYRS VLIKGKRKRR NSGSSDSRSH 951 1000 ENSP00000262133/1-1139 QNSPTELNKD RTSRDSSPVM RSSSTLPVPQ PSSAPPTPTR LTGANSDMEE ENSBTAP00000021613/1-1140 QNSPTELNKD RTSRDSSPVM RSSSTLPVPQ PSSAPPTPTR LTGANSDVEE BACU001869/1-1026 QNSPTELNKD RTSRDSSPVM RSSSTLPVPQ PSSAPPTPTR LTGANSDVEE bmy_02348T0/1-1117 QNSPTELNKD RTSRDSSPVM RSSSTLPVPQ PSSAPPTPTR LTGANSDVEE ENSTTRP00000012047/1-1140 QNSPTELNKD RTSRDSSPVM RSSSTLPVPQ PSSAPPTPTR LTGANSDVEE 1001 1050 ENSP00000262133/1-1139 EERGDLIQFY NNIYIKQIKT FAMKYSQAN- MDAPPLSPYP FVRTGSPRRI ENSBTAP00000021613/1-1140 EERGDLIQFY NNIYIRQMKT FAMKYSQANA MDAPPLSPYP FVRTGSPRRI BACU001869/1-1026 EERGDLIQFY NNIYIKQIKT FAMKYSQANA MDAPPLSPYP FVRTGSPRRI bmy_02348T0/1-1117 EERGDLIQFY NNIYIKQIKT FAMKYSQANA MDAPPLSPYP FVRTGSPRRI ENSTTRP00000012047/1-1140 EERGDLIQFY NNIYIKQIKT FAMKYSQAN- MDAPPLSPYP FVRTGSPRRI 1051 1100 ENSP00000262133/1-1139 QLSQNHPVYI SPHKNETMLS PREKIFYYFS NSPSKRLREI NSMIRTGETP ENSBTAP00000021613/1-1140 QLSQNHPVYI SPHKNEAMLS PREKIFYYFS NSPSKRLREI NSMIRTGETP BACU001869/1-1026 QLSQNHPVYI SPHKNEAMLS PREKIFYYFS NSPSKRLREI NSMIRTGETP bmy_02348T0/1-1117 QLSQNHPVYI SPHKNEAMLS PREKIFYYFS NSPSKRLREI NSMIRTGETP ENSTTRP00000012047/1-1140 QLSQNHPVYI SPHKNEAMLS PREKIFYYFS NSPSKRLREI NSMIRTGETP 1101 1150 ENSP00000262133/1-1139 TKKRGILLED GSESPAKRIC PENHSALLRR LQDVANDRGS H ENSBTAP00000021613/1-1140 TKKRGILLED GSESPAKRIC PENHSALLRR LQDVANDRGS H BACU001869/1-1026 TKKRGILLED GSESPAKRIC PENHSALLRR LQDVANDRGS H bmy_02348T0/1-1117 TKKRGILLED GSESPAKRIC PENHSALLRR LQDVANDRGS H ENSTTRP00000012047/1-1140 TKKRGILLED GSESPAKRIC PENHSALLRR LQDVANDRGS H