KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:14:59 2014 Check: 00 .. Name: ENSP00000336940/1-716 Len: 753 Check: 4768 Weight: 1.00 Name: ENSBTAP00000021628/1-715 Len: 753 Check: 6582 Weight: 1.00 Name: bmy_12603T0/1-413 Len: 753 Check: 2491 Weight: 1.00 Name: BACU007333/1-738 Len: 753 Check: 5870 Weight: 1.00 Name: ENSTTRP00000008810/1-738 Len: 753 Check: 6154 Weight: 1.00 // 1 50 ENSP00000336940/1-716 MEDCLHTSSE NLSKLVSWAH SHGTICSLIP NLKHLLSEGS HGNLTAMWGC ENSBTAP00000021628/1-715 MEDCLHTSSE NLSKLVSWAH SHGTICSLIP NLKHLLSEGS HGNLTAMWGC bmy_12603T0/1-413 MEDCLHTSSE NLSKLVSWAH SHGTICSLIP NLKHLLSEGS HGNLTAMWGC BACU007333/1-738 MEDCLHTSSE NLSKLVSWAH SHGTICSLIP NLKHLLSEGS HGNLTAMWGC ENSTTRP00000008810/1-738 MEDCLHTSSE NLSKLVSWAH SHGTICSLIP NLKHLLSEGS HGNLTAMWGC 51 100 ENSP00000336940/1-716 SAGHAYHWPL TATCRAGSQE RVCFQDNRSF NSDSPSIIGV PSETQTSPVE ENSBTAP00000021628/1-715 SAGHAYHWPL TATCRAGSQE RVCFQDNRSF NSDSPSIIGV PSETQTSPVE bmy_12603T0/1-413 SAGHAYHWPL TATCRAGSQE RVCFQDNRSF NSDSPSIIGV PSETQTSPVE BACU007333/1-738 SAGHAYHWPL TATCRAGSQE RVCFQDNRSF NSDSPSIIGV PSETQTSPVE ENSTTRP00000008810/1-738 SAGHAYHWPL TATCRAGSQE RVCFQDNRSF NSDSPSIIGV PSETQTSPVE 101 150 ENSP00000336940/1-716 RYPGRPVKAK LDCNRTRDSC DFSYCSEPSE LDETVEEYED ENTLFDMVCE ENSBTAP00000021628/1-715 RYPGRPVKTK LDCNRTRDSC DFSYCSEPSE LDEAVEEYED ENTLFDMVCE bmy_12603T0/1-413 RYPGRPVKAK LDCNRTRDSC DFSYCSEPSE LDEAVEEYED ENTLFDMVCE BACU007333/1-738 RYPGRPVKAK LDCNRTRDSC DFSYCSEPSE LDEAVEEYED ENTLFDMVCE ENSTTRP00000008810/1-738 RYPGRPVKAK LDCNRTRDSC DFSYCSEPSE LDEAVEEYED ENTLFDMVCE 151 200 ENSP00000336940/1-716 SSVTDEDSDF EPQTQRPQSI ARKRPGVVPS SLHSSSQTQM VDECSNDVII ENSBTAP00000021628/1-715 SSVTDEDSDF EPQPQRPQSI ARKRPGIVPS SLHSSSQTQM IDECSSDVII bmy_12603T0/1-413 SSVTDEDSDF EPQTQRPQSI ARKRPGIVPS SLHSSSQAQM IDECSSDVII BACU007333/1-738 SSVTDEDSDF EPQTQRPQSI ARKRPGIVPS SLHSSSQAQM IDECSSDVII ENSTTRP00000008810/1-738 SSVTDEDSDF EPQTQRPQSI ARKRPGIVPS SLHSSSQAQM IDECSSDVII 201 250 ENSP00000336940/1-716 KKIKQEIPED YYIVANAELT GGVDGPALSL TQMAKPKPQT HAGPSCVGSA ENSBTAP00000021628/1-715 KKIKQEIPED YYIVANAELT GGVDGPALSL TQMAKPKSQT HAGPS-LGSA bmy_12603T0/1-413 KKIKQEIPED YYIVANAELT GGVDGPALSL TQMAKPKPQT HAGPSCIGSA BACU007333/1-738 KKIKQEIPED YYIVANAELT GGVDGPALSL TQMAKPKPQT HAGPSCIGSA ENSTTRP00000008810/1-738 KKIKQEIPED YYIVANAELT GGVDGPALSL TQMAKPKPQT HAGPSCIGSA 251 300 ENSP00000336940/1-716 KLIPHVTSAI STELDPHGMS ASPSVISRPI VQKTARVSLA SPNRGPPGTH ENSBTAP00000021628/1-715 KLISHVTSAI SSELDPHGVS ASPSVMSRPV VQKTTRVSLA SPNRGPPSSH bmy_12603T0/1-413 KLIPHVTSAI STELDPHGVS ASPSVMSRPI VQKNARVSLA SPNRGPTGAH BACU007333/1-738 KLIPHVTSAI STELDPHGVS ASPSVMSRPI VQKTARVSLA SPNRGPTGAH ENSTTRP00000008810/1-738 KLIPHVTSAI STELDPHGMS ASPSVMSRPV VQKTGRVSLA SPNRGPTSAH 301 350 ENSP00000336940/1-716 GTNQQVAMQM PVSTSHPNKQ ISIPLSALQL PGQDEQVASE EFLSHLPSQV ENSBTAP00000021628/1-715 GTSQHVAMQM PVSTSHPNKQ ISIPLSALQL PGQDEQVASE EFLSHLPSQV bmy_12603T0/1-413 GTNQQVAIQM PVSTSHPNKQ ISIPLSALQL PGQDEQVASE EFLSHLPSQV BACU007333/1-738 GTNQQVAIQM PVSTSHPNKQ ISIPLSALQL PGQDEQVASE EFLSHLPSQV ENSTTRP00000008810/1-738 GTSQQVAIQM PVSTSHPNKQ ISIPLSALQL PGQDEQVASE EFLSHLPSQV 351 400 ENSP00000336940/1-716 SSCEVALSPS VNTEPEVSSS QQQPPVAPAI TTEATAQCIP AYSTKLNKFP ENSBTAP00000021628/1-715 SSCEVALSPS VNTEPEVSSS QQQPPVAPTI TTEATAQCIP AYSTKLNKFP bmy_12603T0/1-413 SSCEVALSPS VNTEPEVSSS QQQPPVAPTI TTEATAQCIP ---------- BACU007333/1-738 SSCEVALSPS VNTEPEVSSS QQQPPVAPTI TTEATAQCIP DQDERAAEL- ENSTTRP00000008810/1-738 SSCEVALSPS VNTEPEVSSS QQQPPVAPTI TTEATAQCIP DQDERAAEL- 401 450 ENSP00000336940/1-716 VFNINDDLND LCTSAVSPNT TKATRYALNV WRYWCMTNGL KDHTDITKIP ENSBTAP00000021628/1-715 VFNINDDLND LCTSAVSPNT TKATRYALNV WRYWCMTNGL KDHTDITKIP bmy_12603T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU007333/1-738 ---------- --SREQNEKT IRSTQTALRN FREFLISKYP SETREIYVIP ENSTTRP00000008810/1-738 ---------- --SREQNEKT IRSTQTALRN FREFLISKYP SETREIYVIP 451 500 ENSP00000336940/1-716 AVKLNELLEN FYVTVKKSDG SDFLATSLHA IRRGLDRILK NAGVGFSIT- ENSBTAP00000021628/1-715 AVKLNELLEN FYVTVKKSDG SDFLATSLHA IRRGLDRILK NAGVGFSIT- bmy_12603T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU007333/1-738 CKELDAYLAS FFVDARQKDG SEYEPNSLAN YQCGLERYLK EHRYGYSITR ENSTTRP00000008810/1-738 CKELDAYLAS FFVDARQKDG SEYEPNSLAN YQCGLERYLK EHRYGYSITR 501 550 ENSP00000336940/1-716 SSTFSSSTKK LKEKLWVLSK AGMSGARSRN IVYFSLSDEE EMWQAGCLGD ENSBTAP00000021628/1-715 SSTFSSSTKK LKEKLWVLSK AGMSGARSRN IVYFSVSDEE EMWQTGCLGD bmy_12603T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU007333/1-738 DKEFKRSQEA LKQKQIELRC KG-KGNKPHK SMKLTFADEL ILRKRGLLSR ENSTTRP00000008810/1-738 DKEFKRSQEA LKQKQIELRC KG-KGNKPHK SMKLTFADEL ILRKRGLLSR 551 600 ENSP00000336940/1-716 DSPITLLSTV VKYNSQYLNM RTLQEHADLM YGDIELLKDP QNQPYFARTD ENSBTAP00000021628/1-715 DSPITLLSTV VKYNSQYLNM RTLQEHADLM YGDIELLTDP QNHSYFARTD bmy_12603T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU007333/1-738 YNPEGLLNLV WLNNTKAFGH CTGFHGSTLK WGDIRLRVTE TGLEYLEWMG ENSTTRP00000008810/1-738 YNPEGLLNLV WLNNTKAFGH CTGFHGSTLK WGDIRLRVTE TGLEYLEWMG 601 650 ENSP00000336940/1-716 SVKRESRSGS TRVCHGKIYH EHSRGHKQCP YCLLYKYMYI HRPPTQMEAK ENSBTAP00000021628/1-715 SVKRESRSAS TRVCHGKIYH EHSRGHKQCP YCLLYKYMYV HRPPTQMEAK bmy_12603T0/1-413 --------GM AREVTESLIH VHQR------ ---------- ---------- BACU007333/1-738 QDTGDLNAKT KRGGTDSRVY ATQHAPQTCP -VQDYKEYAQ RRPPAMRYED ENSTTRP00000008810/1-738 QDTGDLNAKT KRGGTDSRVY ATQHAPQTCP -IQDYKEYAQ RRPPAMRYED 651 700 ENSP00000336940/1-716 SPFYLTARKE ATDMGSVWYE EQRMGLRSLR GIVPNLAKKV KL-------- ENSBTAP00000021628/1-715 SPFYLTARKE AADMGRVWYE EQRMGLRSLR GVVPNLAKKV KL-------- bmy_12603T0/1-413 ---------- ---------- ---------- ---------- ---------- BACU007333/1-738 APFYLSIKPV VNLAALHWYN CQALGKNKLA KMVKTMCEKG NIPGRKTNFS ENSTTRP00000008810/1-738 APFYLSIKPV VNLAALHWYN CQALGKNKLA KMVKTMCEKG NIPGRKTNFS 701 750 ENSP00000336940/1-716 --ENCENFTF VSFTQ----- ---------- ---------- -VSRRLGSHS ENSBTAP00000021628/1-715 --ENCENFTF VSFTQ----- ---------- ---------- -VSRRLSSHS bmy_12603T0/1-413 ---------- ---------- ---------- ---------- -ILRRQHS-- BACU007333/1-738 VYQSCSTLSE AQSNQLVLIC NNLSQQAAQS VAGHSNSGNF IVSASYDSSS ENSTTRP00000008810/1-738 VYQSCSTLSE AQSNQLVLIC NNLSQQAAQS VAGHSNSGNF IVSASYDSSS 751 800 ENSP00000336940/1-716 CCQ ENSBTAP00000021628/1-715 CCQ bmy_12603T0/1-413 --- BACU007333/1-738 DTA ENSTTRP00000008810/1-738 DTA