KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:00 2014 Check: 00 .. Name: ENSBTAP00000021638/1-468 Len: 545 Check: 6977 Weight: 1.00 Name: ENSP00000278407/1-500 Len: 545 Check: 247 Weight: 1.00 Name: ENSTTRP00000001964/1-520 Len: 545 Check: 7632 Weight: 1.00 Name: bmy_17544T0/1-454 Len: 545 Check: 7828 Weight: 1.00 Name: BACU017242/1-396 Len: 545 Check: 5692 Weight: 1.00 // 1 50 ENSBTAP00000021638/1-468 ---------- ---------- ---------- -----MASRL TPLTLLLLLL ENSP00000278407/1-500 ---------- ---------- ---------- -----MASRL TLLTLLL-LL ENSTTRP00000001964/1-520 MGAGPGRGGG PLGPRLGAGT DDGGWLCRSA DVAAQMASRL TPLTLLL-LL bmy_17544T0/1-454 ---------- ---------- ---------- ---------- ---------- BACU017242/1-396 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000021638/1-468 LAGDRVTS-- DMI----VGP GNLQEGESEG DSQKGGILDG ESIQGNEDSP ENSP00000278407/1-500 LAGDRASSNP NATSSSSQDP ESLQD-RGEG KVATTVISKM LFVEPILEVS ENSTTRP00000001964/1-520 LAGDRASS-- NLIGISPVDP ESLQGGESEG DIPKGDIPNN VSIKDTEGSS bmy_17544T0/1-454 ---DRASS-- NLIGISPVDP ESLQGGESEG DIPKGDIPNN VSIQDTEGSS BACU017242/1-396 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000021638/1-468 TLPITNLT-- ----VVPATV TKPFSQPATE P--------V QST------- ENSP00000278407/1-500 SLPTTNSTTN SATKITANTT DEPTTQPTTE PTTQPTIQPT QPTTQLPTDS ENSTTRP00000001964/1-520 TLLKTNLT-- ----IETVNT TQPFNQSTTQ PFNQSTTQPI QPT------- bmy_17544T0/1-454 TLLXTNLT-- ----IVTVNT IQPFNQSTTQ P--------I QPT------- BACU017242/1-396 ---------- ---------T IQPFNQSTTQ P--------I QPT------- 151 200 ENSBTAP00000021638/1-468 -IQPTAEPFC LAPVTSCSDS EIRSAEAVLG EALTDFSLRL YQDFSVLKKR ENSP00000278407/1-500 PTQPTTGSFC PGPVTLCSDL ESHSTEAVLG DALVDFSLKL YHAFSAMKKV ENSTTRP00000001964/1-520 -TQATTKSFC PAPVTSCSDL ESHSAEAVLG EALTDFSLNL YHTFSVMKKE bmy_17544T0/1-454 -TQATAKPFC PASVTSCSDL ESHSAEAVLG EALTDFSLNL YHTFSVIKKE BACU017242/1-396 -TQATAKPFC PASVTSCSDL ESHSAEAVLG EALTDFSLNL YHTFSVIKKE 201 250 ENSBTAP00000021638/1-468 ETNFIFSPFS IASLLTQILL GAGGETRVSL EHLLSYPQNF SCVHHALRAF ENSP00000278407/1-500 ETNMAFSPFS IASLLTQVLL GAGENTKTNL ESILSYPKDF TCVHQALKGF ENSTTRP00000001964/1-520 ETNIVFSPFS IASLLTQVLL GARGETKESL ERLLSYPEDF TCVHQALKAS bmy_17544T0/1-454 ETNIVFSPFS IASLLTQVLL GARGETKESL ERLLSYPKDF TCVHQALKAS BACU017242/1-396 ETNIVFSPFS IASLLTQVLL GARGETKESL ERLLSYPKDF TCVHQALKAS 251 300 ENSBTAP00000021638/1-468 MSEGFTSFSQ IFHSSDLTIK DTFAEASQRL YGSSPRPLGN DSTASLELIN ENSP00000278407/1-500 TTKGVTSVSQ IFHSPDLAIR DTFVNASRTL YSSSPRVLSN NSDANLELIN ENSTTRP00000001964/1-520 RSKGFTTVSQ IFHSPDLAIR DTFANASRSL YGNSPKALAN DSKVNLELIN bmy_17544T0/1-454 TSKGFTTVSQ IFHSPDLAIR DTFANASQSL YGNSPEALAN DSKVNLEFIN BACU017242/1-396 TSKGFTTVSQ IFHSPDLAIR DTFANASQSL YGNSPKALAN DGKGNLEFIN 301 350 ENSBTAP00000021638/1-468 DWVAKKTNLR IRRLLDSLPE DTRLILLNAV ALS------- -AKWKIAFDK ENSP00000278407/1-500 TWVAKNTNNK ISRLLDSLPS DTRLVLLNAI YLS------- -AKWKTTFDP ENSTTRP00000001964/1-520 AWVAEETNHK IRQLLDSLPD DFRLVLLNAI YLSEPFPLFP LAKWKTTFNH bmy_17544T0/1-454 AWVAKKTNNK IKQLLDSLPS DFRLVLLNAI YLS------- -AKWKTTFNH BACU017242/1-396 AWVAKKTNHK IRQLLDSLPS DSRLVLLNAI YLS------- -AKWKTTFNH 351 400 ENSBTAP00000021638/1-468 GRTSTKPFHL KSSAIKVPMM NSKKYPVASF TDRTLNARGG RLQLSHNLSF ENSP00000278407/1-500 KKTRMEPFHF KNSVIKVPMM NSKKYPVAHF IDQTLKAKVG QLQLSHNLSL ENSTTRP00000001964/1-520 SRTN-EGFYS RSS-VKVPMM NSKNYPVAHF TDPTLKAKVG RLQLSHNLSF bmy_17544T0/1-454 SRTNMKAFYS GSSVIKVPMM NSKKYPVAHF TDPTLKAKVA RLQLSHNLSF BACU017242/1-396 SRTNMKAFYS GSSVIKVPMM NSKKYPVAHF TDPTLKAKVA RLQLSHNLSF 401 450 ENSBTAP00000021638/1-468 VILVPQTVKH HLQDLEQALS TAVFKAVIKK LEMTKFHPTH LTMPRIKVQS ENSP00000278407/1-500 VILVPQNLKH RLEDMEQALS PSVFKAIMEK LEMSKFQPTL LTLPRIKVTT ENSTTRP00000001964/1-520 VILVPQTLKH RLEDMEQALS PPVFKAIMRK LESAKFHPTH LMMPRIKVKS bmy_17544T0/1-454 VILVPQTLKH RLEDLEQALS PPVFKAVMRK LESAKFHPTH LMMPRIKVKS BACU017242/1-396 VILVPQTLKH RLEDLEQALS PPVFKAVMRK LESAKFHPTH LMMPRIKVKS 451 500 ENSBTAP00000021638/1-468 SQDM------ LDYFDFIYDV NLCGLTEDPD VQVSGIRHQA TLELTESGVE ENSP00000278407/1-500 SQDMLSIMEK LEFFDFSYDL NLCGLTEDPD LQVSAMQHQT VLELTETGVE ENSTTRP00000001964/1-520 NQDL------ LEFFDFTYNL NLCGLTEDPD LQLSAMQHQS VLELTESGVE bmy_17544T0/1-454 NQDM------ LEFFDFTYDI NLCGLTEDPD LQLSAMQHQS ILELTESGVE BACU017242/1-396 NQDM------ LEFFDFTYDI NLCGLTEDPD LQLSAMQHQS ILELTESGVE 501 550 ENSBTAP00000021638/1-468 ATAASVVSVA RNLLLFEVQQ PFLFLLWDQQ HKFPVFMGRV YDPKG ENSP00000278407/1-500 AAAASAISVA RTLLVFEVQQ PFLFVLWDQQ HKFPVFMGRV YDPRA ENSTTRP00000001964/1-520 AAAASAISVA RSLLVFEVQQ PFLFVLWDQQ HKFPVFMGRI YDPRT bmy_17544T0/1-454 AAAASAVSVA RSLLVFEVQQ PFLFVLWDQQ HKFPVFMGRI YDPST BACU017242/1-396 AAAASAVSVA RSLLVFEVQQ PFLFVLWDQQ HKFPVFMGRI YDPST