KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:01 2014 Check: 00 .. Name: ENSP00000262887/1-633 Len: 649 Check: 4600 Weight: 1.00 Name: bmy_15980T0/1-421 Len: 649 Check: 2898 Weight: 1.00 Name: ENSBTAP00000021640/1-646 Len: 649 Check: 6510 Weight: 1.00 Name: ENSTTRP00000014003/1-598 Len: 649 Check: 5936 Weight: 1.00 Name: BACU002075/1-357 Len: 649 Check: 35 Weight: 1.00 // 1 50 ENSP00000262887/1-633 ---------- ----MPEIRL RHVVSCSSQD STHCAENLLK ADTYRKWRAA bmy_15980T0/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021640/1-646 SCISWVRRSP HDVDMPEIRL RHVVSCSSQD STYCAENLLK ADTYRKWRAA ENSTTRP00000014003/1-598 ---------- ----MPEIRL RHVVSCSSQD STYCAENLLK ADTYRKWRAA BACU002075/1-357 ---------- ----MPEIRL RHVVSCSSQD STYCAENLLK ADTYRKWRAA 51 100 ENSP00000262887/1-633 KAGEKTISVV LQLEKEEQIH SVDIGNDGSA FVEVLVGSSA GGAGEQD-YE bmy_15980T0/1-421 ---------- ---------- -----MDG-- --------RR GGFELRDSHL ENSBTAP00000021640/1-646 KAGEKTISVV LQLEKEEQIH SVDIGNDGSA FVEVLVGSSA GGAGEQD-YE ENSTTRP00000014003/1-598 KAGEKTISVV LQLEKEEQIH SVDIGNDGSA FVEVLVGSSA GGAGEQD-YE BACU002075/1-357 KAGEKTISVV LQLEKEEQIH SVDIGNDGSA FVEVLVGSSA GGAGEQD-YE 101 150 ENSP00000262887/1-633 VLLVTSSFMS PSESRSGSNP NRVRMFGPDK LVRAAAEKRW DRVKIVCSQP bmy_15980T0/1-421 VLLVTSSFMS PSESRSGSNS NRVRIFGPDK LVRATAEKRW DRVKIVCSQP ENSBTAP00000021640/1-646 VLLVTSSFMS PAESRSGSNS NRVRIFGPDK LVRAAAEKRW DRVKIVCSQP ENSTTRP00000014003/1-598 VLLVTSSFMS PSESRSGSNS NRVRIFGPD- LVRAAAE-RW D-VK-VCSQ- BACU002075/1-357 VLLVTSSFMS PSESRSGSNS NRVRIFGPDK LVRAAAEKRW DRVKIVCSQP 151 200 ENSP00000262887/1-633 YSKDSPFGLS FVRFHSPPDK DEAEAPSQKV TVTKLGQFRV KEEDESANSL bmy_15980T0/1-421 YSK------- ---VSQPPRQ ---------- ---------- ---------- ENSBTAP00000021640/1-646 YSKDAPYGLS FVRFHSPPDK DEAEVSSQK- -VTKLGQFRV KEEDESASSL ENSTTRP00000014003/1-598 YSKDAPYGLS FVRFHSPPDK EEAEASSQK- -VTKLGQFRV KEEDESASSL BACU002075/1-357 YSKDAPYGLS FVRFHSPPDK EEAEVSSQK- -VTKLGQFRV KEEDESASSL 201 250 ENSP00000262887/1-633 RPGALFFSRI NKTSPVTASD PAGPSYAAAT LQASSAASSA SPVSRAIGST bmy_15980T0/1-421 RGGRGLIS-- -----VAASD PAGPSYAAAT LQASSAASSA SPASKTVGST ENSBTAP00000021640/1-646 KPGALFFSRI NKTPPVAASD PAGPSYAAAT LQASSAASSA SPASKAAGSA ENSTTRP00000014003/1-598 RPGALFFSRI NKTPPVAASD PAGPSYAAAT LQASSAASSA SPASKTVGST BACU002075/1-357 RPGALFFSRI NKTPPVAASD PAGPSYAAAT LQASSAASSA SPASKTVGST 251 300 ENSP00000262887/1-633 SKPQESPKGK RKLDLNQEEK KTPSKPPAQL SPSVPKRPKL PAPTRTPATA bmy_15980T0/1-421 SK-------- ---------- ---------- ---------- ---------V ENSBTAP00000021640/1-646 FKPQESPKGK RKLDLNQEEK KTPSKPSAQP PLPALKRPKL PAPARTSATP ENSTTRP00000014003/1-598 SKPQESPRGK RKLDLSHEEK KTPSKPSAQP SPPALKRTKL SAPTPTPATA BACU002075/1-357 SK--ESPRGK RRLDLSHEEK KTPSKPSAQP SPPALKRPKL PAPTHTPATA 301 350 ENSP00000262887/1-633 PVPARAQGAV TGKPRGEGTE PRRPRAGPEE LGKILQGVVV VLSGFQNPFR bmy_15980T0/1-421 RSSDPARGAA PGKPRGEGAE PRAPRAGPQE LGKILQGVVV VLSGFQNPFR ENSBTAP00000021640/1-646 RTPAPARGAA PGKPRGEGAE PKAPRAGPQE LGKILQGVVV VLSGFQNPFR ENSTTRP00000014003/1-598 PVPAAARGAA PGKPRGEGAE PRAPRAGPQE LGKILQGVVV VLSGFQNPFR BACU002075/1-357 QVPAAARGAV PGKPRGEGAE PRAPRAGPQE LGKILQGVVV VLSGFQNPFR 351 400 ENSP00000262887/1-633 SELRDKALEL GAKYRPDWTR DSTHLICAFA NTPKYSQVLG LGGRIVRKEW bmy_15980T0/1-421 SELRDKALEL GAKYRPDWTP DSTHLICAFA NTPKYSQVLG LGGRIVRKEW ENSBTAP00000021640/1-646 SELRDKALEL GAKYRPDWTP DSTHLICAFA NTPKYSQVLG LGGRIVRKEW ENSTTRP00000014003/1-598 SELRDKALEL GAKYRPDWTP DSTHLICAFA NTPKYSQVLG LGGRIVRKEW BACU002075/1-357 SELRDKALEL GAKYRPDWTP DSTHLM---- ---------- ---------- 401 450 ENSP00000262887/1-633 VLDCHRMRRR LPSQRYLMAG PGSSSEEDEA SHSGGSGDEA PKLPQKQPQT bmy_15980T0/1-421 VLDCHRMRRR LPSRRYLMAG PDSSSEDEGG SHGGSSGDEA PKPPRK---- ENSBTAP00000021640/1-646 VLDCHRMRRR LPSRRYLMAG SGSSSEDEGG SHSGGSGNEA PKAPRKRPQT ENSTTRP00000014003/1-598 VLDCHRMRRR LPSRRYLMAG PDSSSEDEGG SHGGSSGDEA PKPPRKRLQT BACU002075/1-357 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000262887/1-633 KTKPTQAAGP SSPQKPPTPE ETKAASPVLQ EDI-DIEGVQ SEGQDNGAED bmy_15980T0/1-421 ---------- ---------- ---------- ---------- ----DNGTED ENSBTAP00000021640/1-646 KAKPPQAAGP SSPQRPPTPE ETKPASPGAQ EDNDDTEAEQ SEGQDNGAED ENSTTRP00000014003/1-598 KAKPSQAAGP SSPQRPPTPE ETKPPSPGPQ EDT-DTKGEQ SEGQDNGAED BACU002075/1-357 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000262887/1-633 SGDTEDELRR VAEQKEHRLP PGQEENGEDP YAGSTDENTD SEEHQEPPDL bmy_15980T0/1-421 SGDTEDELRR VAEQKGQRPP SG-EENGKDP YAGSTDENTD DEGPPESPNL ENSBTAP00000021640/1-646 SGDTEDELRR VAEQKEERQP PGQEENGEDP YAGSTDENTD HEGPPESPDL ENSTTRP00000014003/1-598 SGDTEDELRR VAEQKEQRPP SG-EENGKDP YAGSTDENTD NEGPPESPNL BACU002075/1-357 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000262887/1-633 PVPELPDFFQ GKHFFLYGEF PGDERRKLIR YVTAFNGELE DNMSDRVQFV bmy_15980T0/1-421 PIPELPDFFQ GKHFFLYGEF PGDERRTLSR YVTAFNGELE DYMSDRVQFV ENSBTAP00000021640/1-646 PVPELPDFFQ GKRFFLYGEF PGDERRTLSR YVTAFNGELE DYMSERVQFV ENSTTRP00000014003/1-598 PIPELPDFFQ GKHFFLYGEF PGDERRTLSR YVTAFNGELE DYMSDRVQFV BACU002075/1-357 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000262887/1-633 ITAQEWDPSF EEALMDNPSL AFVRPRWIYS CNEKQKLLPH QLYGVVPQA bmy_15980T0/1-421 ITAQEWDPSF EEALMDNPSL VFVRPRWIYS CNEKQKLLPH QLYGVVPQA ENSBTAP00000021640/1-646 ITAQEWDPSF EEALTDNPSL VFVRPRWIYS CNEKQKLLPH QLYGVVPQA ENSTTRP00000014003/1-598 ITAQEWDPSF EEALMDNPSL VF-------- ---------- --------- BACU002075/1-357 ---------- ---------- ---------- ---------- ---------