KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:15:01 2014 Check: 00 ..
Name: ENSP00000321070/1-584 Len: 635 Check: 4158 Weight: 1.00
Name: ENSBTAP00000021641/1-584 Len: 635 Check: 8902 Weight: 1.00
Name: ENSTTRP00000011471/1-584 Len: 635 Check: 1406 Weight: 1.00
Name: bmy_19755T0/1-582 Len: 635 Check: 2379 Weight: 1.00
Name: BACU017669/1-584 Len: 635 Check: 9762 Weight: 1.00
//
1 50
ENSP00000321070/1-584 MLSRLRVVST TCTLACRHLH IKEKGKPLML NPRTNKGMAF TLQERQMLGL
ENSBTAP00000021641/1-584 MLSRFKIVAT PCTLACRHLH TKEKGKPLML NPRTNKGMAF TLQERQMLGL
ENSTTRP00000011471/1-584 MLSRFKIVAT PCTLACRHLH IKEKGKPLML NPRTNKGMAF TLQERQMLGL
bmy_19755T0/1-582 MLSRFKIVAA PCTLACRHLH IKEKGKPLML NPRTNKGMAF TLQERQMLGL
BACU017669/1-584 MLSRFKIVAA PCTLACRHLH IKEKGKPLML NPRTNKGMAF TLQERQMLGL
51 100
ENSP00000321070/1-584 QGLLPPKIET QDIQALRFHR NLKKMTSPLE KYIYIMGIQE RNEKLFYRIL
ENSBTAP00000021641/1-584 QGLLPPKIET QDIQALRFHR NLKKLNGPLE KYIYIMGIQE RNEKLFYRIL
ENSTTRP00000011471/1-584 QGLLPPKIET QDIQALRFHR NVKKLNGPLE KYIYIMGIQE RNEKLFYRIL
bmy_19755T0/1-582 QGLLPPKIET QDIQALRFHR NVKKLNGPLE KYIYIMGIQE RNEKLFYRIL
BACU017669/1-584 QGLLPPKIET QDIQALRFHR NVKKLNGPLE KYIYIMGIQE RNEKLFYRIL
101 150
ENSP00000321070/1-584 QDDIESLMPI VYTPTVGLAC SQYGHIFRRP KGLFISISDR GHVRSIVDNW
ENSBTAP00000021641/1-584 QDDIETLMPI VYTPTVGLAC SQYGHIFRRP KGLFISISDR GHVRSIVDNW
ENSTTRP00000011471/1-584 QDDIESLMPI VYTPTVGLAC SQYGXXXXXX XGLFISISDR GHVRSIVDNW
bmy_19755T0/1-582 QDDIESLLPI VYTPTVGLAC SQYGHIFRRP RGLFISISDR GHVRSIVDNW
BACU017669/1-584 QDDIESLLPI VYTPTVGLAC SQYGHIFRRP RGLFISISDR GHVRSIVDNW
151 200
ENSP00000321070/1-584 PENHVK---- ---------- ---------- ---------- ----------
ENSBTAP00000021641/1-584 PENHVK---- ---------- ---------- ---------- ----------
ENSTTRP00000011471/1-584 PENHVK---- ---------- ---------- ---------- ----------
bmy_19755T0/1-582 PENHVKCSEE IMIVIIKWVT GIEFALEKQL DLVRVNLYQK FPSPLFSHCE
BACU017669/1-584 PENHVK---- ---------- ---------- ---------- ----------
201 250
ENSP00000321070/1-584 -------AVV VTDGERILGL GDLGVYGMGI PVGKLCLYTA CAGIRPDRCL
ENSBTAP00000021641/1-584 -------AVV VTDGERILGL GDLGVYGMGI PVGKLCLYTA CAGIRPDRCL
ENSTTRP00000011471/1-584 -------AVV VTDGERILGL GDLGVYGMGI PVGKLCLYTA CAGIRPDRCL
bmy_19755T0/1-582 HIQVDPLAVV VTDGERILGL GDLGVYGMGI PVGKLCLYTA CAGIRPDRCL
BACU017669/1-584 -------AVV VTDGERILGL GDLGVYGMGI PVGKLCLYTA CAGIRPDRCL
251 300
ENSP00000321070/1-584 PVCIDVGTDN IALLKDPFYM GLYQKRDRTQ QYDDLIDEFM KAITDRYGRN
ENSBTAP00000021641/1-584 PVCIDVGTDN PALLKDPFYM GLYQKRDRSQ RYDDLIDEFM KAITDRYGQN
ENSTTRP00000011471/1-584 PVCIDVGTDN PALLKDPFYM GLYQKRDRSQ RYDDLIDEFM KAITDRYGQN
bmy_19755T0/1-582 PVCIDVGTDN PALLKDPFYM GLYQKRDRSQ RYDDLIDEFM KAITDRYGQN
BACU017669/1-584 PVCIDVGTDN PALLKDPFYM GLYQKRDRSQ RYDDLIDEFM KAITDRYGQN
301 350
ENSP00000321070/1-584 TLIQFEDFGN HNAFRFLRKY REKYCTFNDD IQGTAAVALA GLLAAQKVIS
ENSBTAP00000021641/1-584 TLIQFEDFGN HNAFRFLRKY REKYCTFNDD IQGTAAVALA GLLAAQKVIG
ENSTTRP00000011471/1-584 TLIQFEDFGN HNAFRFLRKY REKYCTFNDD IQGTAAVALA GLLAAQKVIG
bmy_19755T0/1-582 TLIQFEDFGN HNAFRFLRKY REKYCTFNDD IQGTAAVALA GLLAAQKVIG
BACU017669/1-584 TLIQFEDFGN HNAFRFLRKY REKYCTFNDD IQGTAAVALA GLLAAQKVID
351 400
ENSP00000321070/1-584 KPISEHKILF LGAGEAALGI ANLIVMSMVE NGLSEQEAQK KIWMFDKYGL
ENSBTAP00000021641/1-584 KPISDHRILF LGAGEAALGI ANLIVMAMVE NGLSEEEARK KIWMVDKFGL
ENSTTRP00000011471/1-584 KPISEHRILF LGAGEAALGI ANLIVMAMVE NGLSEEEAQK KIWMVDKFGL
bmy_19755T0/1-582 KPISEHRILF LGAGEAALGI ANLIVMAMVE NGLSEEEARK KIWMVDKFGL
BACU017669/1-584 KPISEHRILF LGAGEAALGI ANLIVMAMVE NGLSEEEARK KIWMVDKFGL
401 450
ENSP00000321070/1-584 LVKGRKAKID SYQEPFTHSA PESIPDTFED AVNILKPSTI IGVAGAGRLF
ENSBTAP00000021641/1-584 LFKGRKAKIE SHQEAFAHSA PESLPDTFEE AVNILKPSAI IGVAGAGRLF
ENSTTRP00000011471/1-584 LFKGRKATID SHQEPFAHLA PESVPDTFED AVNILKPSAI IGVAGAGRLF
bmy_19755T0/1-582 LFKGRKATID SHQEPFAHLA PESVPDTFED AVNTLKPSAI IGVAGAGRLF
BACU017669/1-584 LFKGRKATID SHQEPFAHLA PESVPDTFED AVNILKPSAI IGVAGAGRLF
451 500
ENSP00000321070/1-584 TPDVIRAMAS INERPVIFAL SNPTAQAECT AEEAYTLTEG RCLFASGSPF
ENSBTAP00000021641/1-584 TPGVIKAMAE INERPIIFAL SNPTAQAECT AEEAYTLTEG RCLFASGSPF
ENSTTRP00000011471/1-584 TPGVIKAMAD INERPVIFAL SNPPAQAECP AEEAYTLTEG RCLFASGSPF
bmy_19755T0/1-582 TPGVIKAMAD INERPIIFAL S--------- ---------- ----------
BACU017669/1-584 TPGVIKAMAD INERPIIFAL SNPTAQAECT AEEAYTLTEG RCLFASGSPF
501 550
ENSP00000321070/1-584 GPVKLTDGRV FTPGQGNNVY IFPGVALAVI LCNTRHISDS VFLEAAKALT
ENSBTAP00000021641/1-584 EPVKLSDGQV FTPGQGNNVY IFPGVALAVI LCNTRHISDH VFLEAAKALT
ENSTTRP00000011471/1-584 EPVKLSDGQV FIPGQGNNVY IFPGVALAVI LCNTRHISDH VFLEAAKALT
bmy_19755T0/1-582 ---------- ---------- ----VALAVI LCNTRHISDH VFLEAAKALT
BACU017669/1-584 EPVKLSDGQV FTPGQGNNVY IFPGVALAVI LCNTRHISDH VFLEAAKALT
551 600
ENSP00000321070/1-584 SQLTDEELAQ GRLYPPLANI QEVSINIAIK VTEYLYANKM AFRYPEPEDK
ENSBTAP00000021641/1-584 SQLTDKELAQ GRLYPPLSNI QEVSINIAIK VTEYLYANKM AFRYPEPEDK
ENSTTRP00000011471/1-584 NQLTDKELAQ GRLYPPLANI QEVSINIAIK VTEYLYANKM AFRYPEPEDK
bmy_19755T0/1-582 SQLMDKELAQ GRLYPPLANI QEVSINIAIK VTEYLYANKM AFRYPEPEDK
BACU017669/1-584 SQLTDKELAQ GRLYPPLANI QEVSINIAIK VTEYLYANKM AFRYPEPEDK
601 650
ENSP00000321070/1-584 AKYVKERTWR SEYDSLLPDV YEWPESASSP PVITE
ENSBTAP00000021641/1-584 AKYIRERIWR SEYDSLLPDV YEWPEAAAHP PPITE
ENSTTRP00000011471/1-584 TRYIRERIWR SEYDSLLPDV YDWPEPASRP PPTTE
bmy_19755T0/1-582 ARYIQERIWR SEYDSLLPDV YDWPEPASCP PPTTE
BACU017669/1-584 ARYIRERIWR SEYDSLLPDV YDWPEPASRP PPTTE