KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:04 2014 Check: 00 .. Name: ENSP00000332806/1-766 Len: 766 Check: 8452 Weight: 1.00 Name: ENSBTAP00000021652/1-721 Len: 766 Check: 7124 Weight: 1.00 Name: ENSTTRP00000002521/1-676 Len: 766 Check: 6218 Weight: 1.00 Name: bmy_07289T0/1-713 Len: 766 Check: 7534 Weight: 1.00 Name: BACU018652/1-665 Len: 766 Check: 2054 Weight: 1.00 // 1 50 ENSP00000332806/1-766 MGRRRLLVWL CAVAALLSGA QARGTPLLAR PAPPGASRYS LYTTGWRPRL ENSBTAP00000021652/1-721 ---------- ---------- ---------- ---------- -----WIPEI ENSTTRP00000002521/1-676 ---------- ---------- ---------- ---------- ---------- bmy_07289T0/1-713 ---------- ---------- ---------- ---------- -----MRGHP BACU018652/1-665 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000332806/1-766 RPGPHKALCA YVVHRNVTCI LQEGAESYVK AEYRQCRWGP KCPGTVTYRT ENSBTAP00000021652/1-721 RRGTDRALCA YVVHRNVTCV LQEGAESYLK AEYRQCGWGP KCPGTVTYRS ENSTTRP00000002521/1-676 ---------- ---------- ---------- ---------- NCPGTVTYRT bmy_07289T0/1-713 HPVPGPLISP LP-------- RQEGAENYIK AEYRQCGWGP KCPGTVTYRT BACU018652/1-665 ---------- ---------- ---------- ---------- -CPGTVTYRT 101 150 ENSP00000332806/1-766 VLRPKYKVGY KTVTDLAWRC CPGFTGKRCP EHLTDHGAAS PQLEPEPQIP ENSBTAP00000021652/1-721 VLRPRYKVGY KTVTDLAWRC CPGLAGEGCP EHLTDHGATP PQPEPETQSP ENSTTRP00000002521/1-676 VLRPKYKVGY KTVTDLAWRC CPGLAGEGCP EHLTDHAAAP PQPEPEPQVP bmy_07289T0/1-713 VLRPKYKVGY KTVTDLAWRC CPGLAGEGCP EHLTDHAATP LQPEPEPQVP BACU018652/1-665 VLRPKYKVGY KTVTDLAWRC CPGLAGEGCP EHLTDHAATP PQPEPEPQVP 151 200 ENSP00000332806/1-766 SGQLDPGPRP PSYSRAAPSP HGRKGPGLFG ERLERLEGDV QRLAQTYGTL ENSBTAP00000021652/1-721 SGQVGPGPRP LPSSRVAPSP HGRKGPGLFG ERLERLEGDV QRLAQAYGTL ENSTTRP00000002521/1-676 SGQVGPGPRP LPSSRAASSP HGRKGPGLFG ERLERLEGDV QRLAQAYGTL bmy_07289T0/1-713 SGQVGPGPRP LPSSRAASSP HGRKGPGLFG ERLERLEGDV QRLAQAYGTL BACU018652/1-665 SGQVGPGPRP LPSSRAASSP HGRKGPGLFG ERLERLEGDV QRLAQAYGTL 201 250 ENSP00000332806/1-766 SGLVASHEDP NRMTGGPRAP AVPVGFGVIP EGLVGPGDRA RGPLTPPLDE ENSBTAP00000021652/1-721 SGLVARRDDP SRMTGGPRAP ATPVGFGVIP EGFVSPRDRA GKPLSPPLDE ENSTTRP00000002521/1-676 SGLVASHEDP NRVTGGSNAP AAPVGFGVIP EGFVNPRDRA GGPLTPPLDE bmy_07289T0/1-713 RGLVASHEDP NRVTGGPSAP AAPVGFGVIP EGFVNPRDRA GGPLTPPLDE BACU018652/1-665 RGLVTSHEDP NRVTGGPSAP AAPVGFGVIP EGFVNPRDRA GGPLTPPLDE 251 300 ENSP00000332806/1-766 ILSKVTEVSN TLQTKVQLLD KVHGLALGHE AHLQRLREAP PSPLTSLALL ENSBTAP00000021652/1-721 ILSKVTEVSN TLRTKVQLLD KVHGLALGHE AHLQRLREAP PSPLTSLALL ENSTTRP00000002521/1-676 ILSKVTEVSN TLRTKVQLLD EVHGLALGHE AHLQRLRESP PSPLTSLALL bmy_07289T0/1-713 ILSKVTEVSS TLRTKVQLLD EVRGLALGHE AHLQRLREAP PSPLTSLALL BACU018652/1-665 ILSKVTEVSS TLRTKVQLLD EVHGLALGHE AHLQRLREAP PSPLTSLALL 301 350 ENSP00000332806/1-766 EEYVDRRLHR LWGSLLDGFE QKLQGVQSEC DLRVQEVRRQ CEEGQAASRR ENSBTAP00000021652/1-721 DEYVDRRLHR LWGSLLDGFE QKLQGVQSAC DLHVQEVRQQ CEEGQAASRR ENSTTRP00000002521/1-676 DEYVDRRLHR LWGNLLDGVE QKLQGVQNAC DLQVQEVRQQ FEEGQAASRR bmy_07289T0/1-713 DEYVDRRLHR LWGSLLDGFE QKLQGVQNAC DLRVQEVRQQ LEEGQAASRR BACU018652/1-665 DEYVDRRLHR LWGSLLDGFE QKLQGVQNAC DLRVQEVRQQ LEEGRAASQR 351 400 ENSP00000332806/1-766 LHQSLDGREL ALRQELSQLG SQLQGLSVSG RGSCCGQLAL INARMDGLER ENSBTAP00000021652/1-721 LHQSLDGREL ALRRELSQLG TRLQGLSVAG GGSCCGQLAF IRARVDSLER ENSTTRP00000002521/1-676 LHQSLDGREL ALRRELSQLG TRLQGLGVAG RGSCCGQLAL ISTRVDSLER bmy_07289T0/1-713 LHQSLDGREL ALRRELSQLG TRLQGLGVAG RGSCCGQLAL ISTRVDSLER BACU018652/1-665 LHQSLDGREL ALRRELSQLG TRLQGLGVAG RGSCCGQLAL ISTRVDSLER 401 450 ENSP00000332806/1-766 ALQAVTETQR GPGAPAGDEL TRLSAAMLEG GVDGLLEGLE TLNGTEGGAR ENSBTAP00000021652/1-721 NLQAVIEAHR GRGAPDGDDL TRLSAAMLEG GMDGLLEGVE TANGTGGGAG ENSTTRP00000002521/1-676 KLQAVTEAQR GHSPPDGNDL TRLSAAMLEG GVDGLLEGLE TVNSTEGGAR bmy_07289T0/1-713 KLQAVTEAQR GHSPPDGNDL TRLSAAMLEG GVDGLLEGLD TVNGTEGGAR BACU018652/1-665 KLQAVTEAQR GHSPPDGNDL TRLSAAMLEG GVDGLLEGLE TVNGTEGGAR 451 500 ENSP00000332806/1-766 GCCLRLDMGG WGVGGFGTML EERVQSLEER LATLAGELSH DSASPGRSAR ENSBTAP00000021652/1-721 GCCLGMEEGG WGSRGFHTTL EERVQRLEER LVTLAGELSH DRAPPGRPAR ENSTTRP00000002521/1-676 GCCLGMQEGG WGVRGFHTML EERVQRLEER LLTLAGEPSH DSAPAGRSAR bmy_07289T0/1-713 GCCLGMEEGG WGVRGFHTTL EERVQRLEER LLTLAGEPSH DSAPPGRSAR BACU018652/1-665 GCCLGMEEGG WGVRGFHTTL EERVQRLEER LLTLAGEPSH DSAPPGRSAR 501 550 ENSP00000332806/1-766 PLVQTELAVL EQRLVSLETS CTPSTTSAIL DSLVAEVKAW QSRSEALLRQ ENSBTAP00000021652/1-721 PLVQTELAVL EQRLVSLETS CTPGTTSAVL DKLGAEVKAW QSRSEALLRQ ENSTTRP00000002521/1-676 PLVQTELAVL EQRLVSLEAS CTPRTTLAIL DNLVAEVKAW QSRSEALLRQ bmy_07289T0/1-713 PLVQTELAVL EQRLVSLEAS CTPRTTSAIL DNLVAEVKAW QSRSEALLRQ BACU018652/1-665 PLVQTELAVL EQRLLSLEAS CTPRTTSAIL DNLVAEVKAW QSRSEALLRQ 551 600 ENSP00000332806/1-766 VASHAALLQQ LNGTVAEVQG QLAEGTGSSL QGEITLLKVN LNSVSKSLTG ENSBTAP00000021652/1-721 VASHAVLLQQ LNGTVAEVQG QLAEATGSSL QGEITLLKVN LNSVSKSLTG ENSTTRP00000002521/1-676 VASHAALLQK LNGTVAEVQG QLAEAAGNSL QGEITLLKVN LNSVSKSLTG bmy_07289T0/1-713 VASHAALLQQ LNGTVAEVQG QLAEATGGSL QGEITLLKVN LNSVSKSLTG BACU018652/1-665 VASHAALLQQ LNGTVAEVQG QLAEATGGSL QGEITLLKVN LNSVSMWLTG 601 650 ENSP00000332806/1-766 LSDSVSQYSD AFLAANTSLD ERERKVEAEV QAIQEQVSSQ GSRLQAGHRQ ENSBTAP00000021652/1-721 LSDSVSQYSD AFLAANTSLD ERERKVEAEV HAIQEQVSSQ GSRLRADHRQ ENSTTRP00000002521/1-676 LSDSVSQYSD ALLAANTSLD ERERKVEAEV HAIQEQVSSQ GSWLRAGHRQ bmy_07289T0/1-713 LSDSVSQYSD ALLAANTSLD ERERKVEAEV HAIQEQVSSQ GSWLRAGHRQ BACU018652/1-665 LSDSVSQYSD ALLAANTSLD ERERKVEAEV HAIQEQVSSQ GRWLRAGHRQ 651 700 ENSP00000332806/1-766 VLNLRGELEQ LKAGVAKVAS GLSRCQDTAQ KLQHTVGHFD QRVAQVEGAC ENSBTAP00000021652/1-721 VLSLRGELEQ LRASMAEVAG GLSRCQDTAQ ELRHAVGHFD QRVARVEGAC ENSTTRP00000002521/1-676 VLSLRGQLEQ LKAGVASVAG RLSRCQDTAQ ELQLAVGHFD QRVAQVEGTC bmy_07289T0/1-713 VLSLRGQLEQ LKAGVASVAG GLSRCQDTAQ ELQLAVGHFD QRVAQVEGTC BACU018652/1-665 VLSLRGQLEQ LKAGVASVAG GLSRCQDTAQ ELQLAVGHFD QRVAQVEGTC 701 750 ENSP00000332806/1-766 RRLGLLAAGL DSLPTEPLRP REGLWSHVDQ LNRTLAQHTQ DIARLRDDLL ENSBTAP00000021652/1-721 RRLGLLAAGL DSLPAESPGP REGLWDHVDQ LNRTLGQHAK DIARLRDDLL ENSTTRP00000002521/1-676 GRLGLLAAGL DSLAAESLGP REGLWDHVDQ LNRTLAQHAK DIARLRDDLL bmy_07289T0/1-713 GRLGLLAAGL DSLAAESLGP REGLWDHVDQ LNRTLAQHAK DIARLRDDLL BACU018652/1-665 GRLGLLAAGL DSLAAESLGP REGLWDH--- -------HAK DIARLRDDLL 751 800 ENSP00000332806/1-766 DCQAQLAEQV RPGQAN ENSBTAP00000021652/1-721 DCRAQLADRA RPGQAN ENSTTRP00000002521/1-676 DCRAQLAEQV RAGQAD bmy_07289T0/1-713 DCRAQLAEQV RAGQAD BACU018652/1-665 DCRAQLAEQV RAGQAD