KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:15:04 2014  Check: 00 ..

 Name: ENSP00000263851/1-177     Len:    177  Check:  6603  Weight:  1.00
 Name: ENSBTAP00000021659/1-176  Len:    177  Check:  8444  Weight:  1.00
 Name: ENSTTRP00000000864/1-176  Len:    177  Check:  7556  Weight:  1.00
 Name: BACU011172/1-131          Len:    177  Check:  545  Weight:  1.00
 Name: bmy_07283T0/1-126         Len:    177  Check:  6091  Weight:  1.00

//


                          1                                                   50
ENSP00000263851/1-177     MFHVSFRYIF GLPPLILVLL PVASSDCDIE GKDGKQYESV LMVSIDQLLD 
ENSBTAP00000021659/1-176  MFHVSFRYIF GIPPLILVLL PVASSDCDIS GKDGGAYQNV LMVNIDD-LD 
ENSTTRP00000000864/1-176  MFHVSFRYIF GIPPLILVLL PVASSDCDIE GKDGGAYQNV LMVNIND-LD 
BACU011172/1-131          MFHVSFRYIF GIPPLILVLL PVASFDCDIE GKDGGAYQNV LMVNI----- 
bmy_07283T0/1-126         MIDFDSNCLN NEP------- ---------- ---------- ---------- 


                          51                                                 100
ENSP00000263851/1-177     SMKEIGSNCL NNEFNFFKRH ICDANKEGMF LFRAARKLRQ FLKMNSTGDF 
ENSBTAP00000021659/1-176  NMINFDSNCL NNEPNFFKKH SCDDNKEASF LNRASRKLRQ FLKMNISDDF 
ENSTTRP00000000864/1-176  SMIDFDSNCL NNEPNFFKKH SCDDNKEASF LYRAARKLKQ FLKMNISDDF 
BACU011172/1-131          ---------- ---------- ---NDLEASF LYRAARKLKQ FLKMNISDDF 
bmy_07283T0/1-126         ---------- ----NFFKKH SCDDNKEASF LYRAARKLKQ FLKMNISDDF 


                          101                                                150
ENSP00000263851/1-177     DLHLLKVSEG TTILLNCTGQ VKGRKPAALG EAQPTKSLEE NKSLKEQKKL 
ENSBTAP00000021659/1-176  KLHLSTVSQG TLTLLNCTSK GKGRKPPSLS EAQPTKNLEE NKSSKEQKKQ 
ENSTTRP00000000864/1-176  NLHLSTVSQG TLTLLNCTNK GKGRKSTSLG EAQPTKNLEE NKSLKEQKKQ 
BACU011172/1-131          NLHLSTVSQG TLTLLNCTSK ---------- --------EE NKSLKEQKKQ 
bmy_07283T0/1-126         NLHLSTVSQG TLTLLNCTSK GKGRKPTSLG EAQPTKNLEE NKSLKEQKKQ 


                          151                                                200
ENSP00000263851/1-177     NDLCFLKRLL QEIKTCWNKI LMGTKEH 
ENSBTAP00000021659/1-176  NDLCFLKILL QKIKTCWNKI LRGIKEH 
ENSTTRP00000000864/1-176  NDLCFLKILL QKIKTCWNKI LRGAKEH 
BACU011172/1-131          NDLCFLKILL QKIKTCWNKI LRGAKEH 
bmy_07283T0/1-126         NDLCFLKILL QKIKTCWNKI LRGAKEH