KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:04 2014 Check: 00 .. Name: ENSP00000298351/1-806 Len: 810 Check: 663 Weight: 1.00 Name: ENSBTAP00000021660/1-806 Len: 810 Check: 1005 Weight: 1.00 Name: bmy_03493T0/1-665 Len: 810 Check: 3989 Weight: 1.00 Name: BACU010839/1-805 Len: 810 Check: 1503 Weight: 1.00 Name: ENSTTRP00000011521/1-809 Len: 810 Check: 4714 Weight: 1.00 // 1 50 ENSP00000298351/1-806 ----MSASPD DLSTGGRLQN MTVDECFQSR NTVLQGQPFG GVPTVLCLNI ENSBTAP00000021660/1-806 ----MTVLPS SLNMVGKSRN FTVDDCFSSR NTVLKGQPFG GIPTVLFLNI bmy_03493T0/1-665 ---------- ---------- ---------- ---------- ---------- BACU010839/1-805 ----MTVSPG NLNMVEKSRN FSADDCFHSR STVLQGQPFG GIPTVLFLNV ENSTTRP00000011521/1-809 EPPRMTVSPG NLNMVEKSRN FSADDCFHSR STVLQGQPFG GIPTVLFLNV 51 100 ENSP00000298351/1-806 ALWVLVLVVY SFLRKAAWDY GRLALLIHND SLTSLIYGEQ SEKTSPSETS ENSBTAP00000021660/1-806 ILWVVIVLVY SFLRKAAWDY GRLALLIHND SLTSLVYGEQ SEKTSPSDIS bmy_03493T0/1-665 ---------- ---------- ---------- ---------- ---------- BACU010839/1-805 ILWVVIVLVY SFLRKAAWDY GRLALLIHND SLTSLIYGEQ SEKTSPSDIS ENSTTRP00000011521/1-809 ILWVVIVLVY SFLRKAAWDY GRLALLIHND SLTSLIYGEQ SEKTSPSDIS 101 150 ENSP00000298351/1-806 LEMERRDKGF CSWFFNSITM KDEDLINKCG DDARIYIVFQ YHLIIFVLII ENSBTAP00000021660/1-806 LEMEHRDKGF YSWFFNTITM KNEDLISRCG DDARIYIMFQ YHLIIFILIL bmy_03493T0/1-665 ---------- ---------- ------MEAG DDTSFWYKFG ---------- BACU010839/1-805 LEMEHRDKGF YSWFFNTITM KNEDLISKCG DDARIYIMFQ YHLIVFVLIL ENSTTRP00000011521/1-809 LEMEHRDKGF YSWFFNTITM KNEDLISKCG DDARIYIMFQ YHLIILVLIL 151 200 ENSP00000298351/1-806 CIPSLGIILP INYTGSVLDW SSHFARTTIV NVSTESKLLW LHSLLSFFYF ENSBTAP00000021660/1-806 CIPSLGIILP INYTGDVLDR DSHFGRTTIV NVSTESKFLW LHSIFAFLYF bmy_03493T0/1-665 --PGPGT--- ---QKADSNW NSHFGRTTIV NVSTESKFLW LHSFFAFLYF BACU010839/1-805 CIPSLGIILP INYTGNVLDW NSHFGRTTIV NVSTESKFLW LHSFFAFLYF ENSTTRP00000011521/1-809 CIPSLGIILP INYTGNVLDW NSHFGRTTIV NVSTESKFLW LHSFFAFLYF 201 250 ENSP00000298351/1-806 ITNFMFMAHH CLGFAPRNSQ KVTRTLMITY VPKDIEDPEL IIKHFHEAYP ENSBTAP00000021660/1-806 ITNLLFMTHH CLGFVHRKSY AVTRTLMITY VPTDIQDPEI IIKHFHEAYP bmy_03493T0/1-665 VTNFLFMTHH CLGFVPKKSY KVTRTLMITY VPTDIQDPEI IIKHFHEAYP BACU010839/1-805 VTNFLFMTHH CLGFVPKKSY KVTRTLMITY VPTDIQDPEI IIKHFHEAYP ENSTTRP00000011521/1-809 VTNFLFMTHH CLGFVPKKSY KVTRTLMITY VPTDIQDPEI IIKHFHEAYP 251 300 ENSP00000298351/1-806 GSVVTRVHFC YDVRNLIDLD DQRRHAMRGR LFYTAKAKKT GKVMIRIHPC ENSBTAP00000021660/1-806 GCVVTRVHFC YDVRTLIDLD DQRRHAMRGR LYYTAKAKKK GKVMIKVHPC bmy_03493T0/1-665 GCVVTRVHFC YDVRTLIDLD DQRRHAMRGR LYYTAKAKKK GKVMIKVHPC BACU010839/1-805 GCVVTRVHFC YDVRTLIDLD DQRRHAMRGR LYYTAKAKKK GKVMIKIHPC ENSTTRP00000011521/1-809 GCVVTRVHFC YDVRTLIDLD DQRRHAMRGR LYYTAKAKKK GKVMIKVHPC 301 350 ENSP00000298351/1-806 ARLCFCKCWT CFKEVDAEQY YSELEEQLTD EFNAELNRVP LKRLDLIFVT ENSBTAP00000021660/1-806 SRLCFCRCWA CFKEVDAEQY YSELEEQLTD EFNAELNRAR LKRLDLIFVT bmy_03493T0/1-665 SRLCFCKCWV CFKEVDAEQY YSELEEQLTD EFNAELNRVR LKRLDLIFVT BACU010839/1-805 SRLCFCKCWV CFKEVDAEQY YSELEEQLTD EFNAELNRVR LKRLDLIFVT ENSTTRP00000011521/1-809 SRLCFCKCWV CFKEVDAEQY YSELEEQLTD EFNAELNRVR LKRLDLIFVT 351 400 ENSP00000298351/1-806 FQDSRMAKRV RKDYKYVQCG VQPQQSSVTT IVKSYYWRVT MAPHPKDIIW ENSBTAP00000021660/1-806 FQDSRMTKHI LQDYKFIHCG MSPKESSVTT IVKSYRWRVV RAPHPKDIIW bmy_03493T0/1-665 FQDSRMTKHI LEDYKFIQCG VSAQQSSVTT IVKSDHWRVV RAPHPKDIIW BACU010839/1-805 FQDSRMTKHI LEDYKFIQCG VSAQQSSVTT IVKSDHWRVV LAPHPKDIIW ENSTTRP00000011521/1-809 FQDSRMTKHI LEDYKFIQCG VSAQQSSVTT VVKSDRWRVV LAPHPKDIIW 401 450 ENSP00000298351/1-806 KHLSVRRFFW WARFIAINTF LFFLFFFLTT PAIIMNTIDM YNVTRPIEKL ENSBTAP00000021660/1-806 KHLSVRRFHW WARFIAINTF LFFLFFFLTT PAIIINTIDL YNVTRPIENL bmy_03493T0/1-665 KHLSVRRFHW WARFIAINTF LFFLFFFLTT PAIIINTIDM YNVTRPIEKL BACU010839/1-805 KHLSVRRFHW WARFIAINTF LFFLFFFLTT PAIIINTIDM YNVTRPIEKL ENSTTRP00000011521/1-809 KHLSVRRFHW WARFIAINTF LFLLFFFLTT PAIIINTIDM YNVTRPMEKL 451 500 ENSP00000298351/1-806 QNPIVTQFFP SVMLWGFTVI LPLIVYFSAF LEAHWTRSSQ NLVMVHKCYI ENSBTAP00000021660/1-806 QSPIVTQFFP SVLLWAFTVT LPLIVYLSAF LEAHWTRTSQ NLIIAHKCYV bmy_03493T0/1-665 KSPIVTQFFP SLLLWAFTVI MPLIVYLSAF LEAHWTRSAQ NLIIVHKCYI BACU010839/1-805 KSPIVTQFFP SLLLWAFTVI MPLIVYLSAF LEAHWTRSTQ NLIIVHKCYI ENSTTRP00000011521/1-809 KSPIVTQFFP SLLLWAFTVI LPLIVYLSAF LEAHWTRSAQ NLIIVHKCYI 501 550 ENSP00000298351/1-806 FLVFMVVILP SMGLTSLDVF LRWLFDIYYL EQASIRFQCV FLPDNGAFFV ENSBTAP00000021660/1-806 FLVFMVVILP SMGLTSLDVF LHWLFDIYYL EQASVRFQCV FLPDNGAFFV bmy_03493T0/1-665 FLVFMVVILP SMGLTSLDVF LRWLFDIYYL EQASIRFQCV FLPDNGAFFV BACU010839/1-805 FLVFMVVILP SMGLTSLDVF LRWLFDIYYL EQASIRFQCV FLPDNGAFFV ENSTTRP00000011521/1-809 FLVFMVVILP SMGLTSLDVF FRWLFDIYYL EQASIRFQCV FLPDNGAFFV 551 600 ENSP00000298351/1-806 NYVITAALLG TGMELLRLGS LFCYSTRLFF SRSEPERVNI RKNQAIDFQF ENSBTAP00000021660/1-806 NYVITAAFIG TGMELMRLGS LFLYTIRLVF SRSEPERVNI RMNQAMDFQY bmy_03493T0/1-665 NYVITSALIG TGMELLRLGS LFLYTTRLVF SRSEPERVHI RMNQAMDFQY BACU010839/1-805 NYVITSALIG TGMELLRLGS LFLYTTRLFF SRSEPERVHI RMNQAMDFQY ENSTTRP00000011521/1-809 NYVITSALIG TGMELLRLGS LFLYTTRLFF SRSEPERVHI RMNQAMDFQY 601 650 ENSP00000298351/1-806 GREYAWMMNV FSVVMAYSIT CPIIVPFGLL YLCMKHLTDR YNMYYSFAPT ENSBTAP00000021660/1-806 GREYAWMMNV FSVVMAYSIT CPIIAPFGLL YLCMKHVTDR YNMYYSYAPT bmy_03493T0/1-665 GREYAWMLNV FSVVMAYSIT CPIIVPFGLL YLCMKHVTDR YNMYYSYAPT BACU010839/1-805 GREYAWMLNV FSVVMAYSIT CPIVVPFGLL YLCMKHVTDR YNMYYSYAPT ENSTTRP00000011521/1-809 GREYAWTLNV FSVVMAYSIT CPIIVPFGLL YLCMKHVTDR YNMYYSYAPT 651 700 ENSP00000298351/1-806 KLNEQIHMAA VSQAIFAPLL GLFWMLFFSI LRLGSLHAIT IFSLSTLLIA ENSBTAP00000021660/1-806 KLNEQIHMAA IHQAIFAPLL GLVWMLFFSI LRLGSQHAIT IFSLTTLIVS bmy_03493T0/1-665 KLNEQIHMAA VHQAIFAPLL GLFWMLFFSI LRLGPLHAIT FFSLSTLIVS BACU010839/1-805 KLNEQIHMAA VHQAVFAPLL GLFWMLFFSI LRLGPLHAIT FFSLSTLIVS ENSTTRP00000011521/1-809 KLNEQIHMAA VHQAVFAPLL GLLWMLFFSV LRLGTLHAIT FFSLSTLIVS 701 750 ENSP00000298351/1-806 MVIAFVGIFL GKLRMVADYE PEEEEIQTVF DMEPSSTSST PTSLLYVATV ENSBTAP00000021660/1-806 IIMACVATFL GKMSKRTNYE PQPEEMETVF DLEPSSTSST PTSLLYVATV bmy_03493T0/1-665 MILACIGTFL GKLRKASDYE PE-EEMETVF DLEPSSTSST PTSLLYVATV BACU010839/1-805 MILACVGTFL GKLRKASDYE PE-EEMETVF DLEPSSTSST PTSLLYVATV ENSTTRP00000011521/1-809 MILACVGTFL GKLRKASDYE PE-EEMETVF DLEPSSTSST PTSLLYVATV 751 800 ENSP00000298351/1-806 LQEPELNLTP ASSPARHTYG TMNNQPEEGE EESGLRGFAR ELDSAQFQEG ENSBTAP00000021660/1-806 LQEPEMNLTP ASSPAQPTYG TMSRQPEEGE EESGVRAFSR ELDSARFQEG bmy_03493T0/1-665 LQEPEMNLTP ASSPARHTYG TMNGQSEEGE EESGVRGFAR ELDSAQFQEG BACU010839/1-805 LQEPEMNLTP ASSPARHTYG TMNGQPEEGE EESGVRGFAR ELDSAQFQEG ENSTTRP00000011521/1-809 LQEPEMNLTP ASSPARHTYG TMNGQPEEGE EESGVRGFAR ELDSAQFQEG 801 850 ENSP00000298351/1-806 LELEGQNQYH ENSBTAP00000021660/1-806 LELGDQSQYH bmy_03493T0/1-665 LELEGQSQYH BACU010839/1-805 LELEGQSQYH ENSTTRP00000011521/1-809 LELEGQSQYH