KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:05 2014 Check: 00 .. Name: ENSTTRP00000015056/1-810 Len: 810 Check: 2764 Weight: 1.00 Name: ENSP00000464893/1-810 Len: 810 Check: 3564 Weight: 1.00 Name: ENSBTAP00000021663/1-809 Len: 810 Check: 5998 Weight: 1.00 Name: bmy_13804T0/1-642 Len: 810 Check: 4993 Weight: 1.00 Name: BACU011523/1-810 Len: 810 Check: 7675 Weight: 1.00 // 1 50 ENSTTRP00000015056/1-810 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ ENSP00000464893/1-810 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ ENSBTAP00000021663/1-809 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ bmy_13804T0/1-642 ---------- ---------- ---------- ---------- ---------- BACU011523/1-810 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ 51 100 ENSTTRP00000015056/1-810 HKCTQHRPYT CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC ENSP00000464893/1-810 HKCTQHRPYT CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC ENSBTAP00000021663/1-809 HKCTQHRPYT CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC bmy_13804T0/1-642 ---------- ---------- ---------- ---------- ---------- BACU011523/1-810 HKCTQHRPYT CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC 101 150 ENSTTRP00000015056/1-810 PEGDECPFLH RTTGDTERRY HLRYYKTGIC IHETDSKGNC TKNGLHCAFA ENSP00000464893/1-810 PEGDECPFLH RTTGDTERRY HLRYYKTGIC IHETDSKGNC TKNGLHCAFA ENSBTAP00000021663/1-809 PEGDECPFLH RTTGDTERRY HLRYYKTGIC IHETDAKGNC TKNGLHCAFA bmy_13804T0/1-642 ---------- ---------- ---------- ---------- ---------- BACU011523/1-810 PEGDECPFLH RTTGDTERRY HLRYYKTGIC IHETDSKGNC TKNGLHCAFA 151 200 ENSTTRP00000015056/1-810 HGPHDLRSPV YDIRELQAME ALQNGQTTVE GSIEGQSAGA ASHAMIEKIL ENSP00000464893/1-810 HGPHDLRSPV YDIRELQAME ALQNGQTTVE GSIEGQSAGA ASHAMIEKIL ENSBTAP00000021663/1-809 HGPHDLRSPV YDIRELQAME ALQNGQTTVE GSMEGQSAGA ASHAMIEKIL bmy_13804T0/1-642 ---------- --------ME ALQNGQTTVE GSIEGQSAGA ASHAMIEKIL BACU011523/1-810 HGPHDLRSPV YDIRELQAME ALQNGQTTVE GSIEGQSAGA ASHAMIEKIL 201 250 ENSTTRP00000015056/1-810 SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH ENSP00000464893/1-810 SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH ENSBTAP00000021663/1-809 SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH bmy_13804T0/1-642 SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH BACU011523/1-810 SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH 251 300 ENSTTRP00000015056/1-810 KYRSSPCPNV KHGDEWGDPG KCENGDSCQY CHTRTEQQFH PEIYKSTKCN ENSP00000464893/1-810 KYRSSPCPNV KHGDEWGDPG KCENGDACQY CHTRTEQQFH PEIYKSTKCN ENSBTAP00000021663/1-809 KYRSSPCPNV KHGDEWGDPG KCENGDSCQY CHTRTEQQFH PEIYKSTKCN bmy_13804T0/1-642 KYRSSPCPNV KHGDEWGDPG KCENGDSCQY CHTRTEQQFH PEIYKSTKCN BACU011523/1-810 KYRSSPCPNV KHGDEWGDPG KCENGDSCQY CHTRTEQQFH PEIYKSTKCN 301 350 ENSTTRP00000015056/1-810 DMQQSGSCPR GPFCAFAHVD QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA ENSP00000464893/1-810 DMQQSGSCPR GPFCAFAHVE QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA ENSBTAP00000021663/1-809 DMQQSGSCPR GPFCAFAHVE QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA bmy_13804T0/1-642 DMQQSGSCPR GPFCAFAHVD QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA BACU011523/1-810 DMQQSGSCPR GPFCAFAHVD QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA 351 400 ENSTTRP00000015056/1-810 GDSVPVSPXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000464893/1-810 GDSVPVSPSS PHAPDLSALL CRNSSLGSPS NLCGSPPGSI RKPPNLEGIV ENSBTAP00000021663/1-809 GDSVPVSPSS PHAPDLSALL CRNSSLGSPS NLCGSPPGSI RKPSNLEGIV bmy_13804T0/1-642 GDSVPVSPSS PHAPDLSALL CRNSSLGSPS NLCGSPPGSI RKPPNLEGIV BACU011523/1-810 GDSVPVSPSS PHAPDLSALL CRNSSLSSPS NLCGSPPGSI RKPPSLEGIV 401 450 ENSTTRP00000015056/1-810 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXAKLKP HSLEPRSQEQ ENSP00000464893/1-810 FPGESGLAPG SYKKAPGFER EDQVGAEYLK NFKCQAKLKP HSLEPRSQEQ ENSBTAP00000021663/1-809 FPGESGLAPG SYKKAPGFER EDQVGAEYL- NLKCQAKLKP HSLEPRSQEQ bmy_13804T0/1-642 FPGESGLAPG SYKKAPGFER EDQVGAEYLK TLKCQAKLKP HSLEPRSQEQ BACU011523/1-810 FPGESGLAPG SYKKAPGFER EDQVGAEYLK TLKCQAKLKP HSLEPRSQEQ 451 500 ENSTTRP00000015056/1-810 PLLQPKQDML GILPVGSPLT SSISSSITSS LAATPPSPAG TSSVPGMNAN ENSP00000464893/1-810 PLLQPKQDML GILPAGSPLT SSISSSITSS LAATPPSPVG TSSVPGMNAN ENSBTAP00000021663/1-809 PLLQPKQDML GILPVGSPLT SSISSSITSS LAATPPSPAG TSSVPGMNAN bmy_13804T0/1-642 PLLQPKQDML GILPVGSPLT SSISSSITSS LAATPPSPAG TSSVPGMNAN BACU011523/1-810 PLLQPKQDVL GILPVGSPLT SSISSSITSS LAATPPSPAG TSSVPGMNAN 501 550 ENSTTRP00000015056/1-810 ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST VPHPGSITIG ENSP00000464893/1-810 ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST VPHPGSITIG ENSBTAP00000021663/1-809 ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST VSHPGSITMG bmy_13804T0/1-642 ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST VPHPGSITIG BACU011523/1-810 ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDTST VPHPGSITIG 551 600 ENSTTRP00000015056/1-810 GSLLQSSAPV NIPGSLSSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN ENSP00000464893/1-810 GSLLQSSAPV NIPGSLGSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN ENSBTAP00000021663/1-809 GSLLQSSAPV NIPGSLGSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN bmy_13804T0/1-642 GSLLQSSAPV NIPGSLSSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN BACU011523/1-810 GSLLQSSAPV NIPGSLSSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN 601 650 ENSTTRP00000015056/1-810 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL ENSP00000464893/1-810 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL ENSBTAP00000021663/1-809 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL bmy_13804T0/1-642 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL BACU011523/1-810 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL 651 700 ENSTTRP00000015056/1-810 RQELDEANGT IKQWEESWKQ ARQACDAWKK EAEEAGERAS AAGAECELAR ENSP00000464893/1-810 RQELDEANST IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR ENSBTAP00000021663/1-809 RQELDEANGT IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR bmy_13804T0/1-642 RQELDEANGT IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR BACU011523/1-810 RQELDDANGT IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR 701 750 ENSTTRP00000015056/1-810 EQRDALEVQV KKLQEELERL HSAPDPQALP TFPDLEALSL STLYSLQKQL ENSP00000464893/1-810 EQRDALEVQV KKLQEELERL HAGPEPQALP AFSDLEALSL STLYSLQKQL ENSBTAP00000021663/1-809 EQRDALEVQV KKLQEELERL HSGPDPQALP AFPGLEALSL STLHSLQKRL bmy_13804T0/1-642 GQRDALEVQV KKLQEELERL HSGPDPQALP TFPDLEALSL STLYSLQKQL BACU011523/1-810 EQRDALEVQV KKLQEELERL HSGPDPQALP TFPDLEALSL STLYSLQKQL 751 800 ENSTTRP00000015056/1-810 RAHLEQVDKA VFHMQSVKCL KCQEQNRAVL PCQHAVLCEL CAEGSECPVC ENSP00000464893/1-810 RAHLEQVDKA VFHMQSVKCL KCQEQKRAVL PCQHAALCEL CAEGSECPIC ENSBTAP00000021663/1-809 RAHLEQVDKA VFHMQSVKCL KCQEQNRAVL PCQHAVLCEL CAEGSECPVC bmy_13804T0/1-642 RAHLEQVDKA VFHMQSVKCL KCQEQNRAVL PCQHAVLCEL CAEGSECPVC BACU011523/1-810 RAHLEQVDKA VFHMQSVKCL KCQEQNRAVL PCQHAVLCEL CAEGSECPVC 801 850 ENSTTRP00000015056/1-810 QPGRAHALQS ENSP00000464893/1-810 QPGRAHTLQS ENSBTAP00000021663/1-809 QPGRAHSLQS bmy_13804T0/1-642 QPGRAHALQS BACU011523/1-810 QPGRAHALQS