KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:06 2014 Check: 00 .. Name: ENSTTRP00000007968/1-265 Len: 289 Check: 5338 Weight: 1.00 Name: ENSP00000379366/1-221 Len: 289 Check: 7785 Weight: 1.00 Name: bmy_18436T0/1-248 Len: 289 Check: 9646 Weight: 1.00 Name: ENSBTAP00000021671/1-216 Len: 289 Check: 5799 Weight: 1.00 // 1 50 ENSTTRP00000007968/1-265 AEQVAAAEQP AFPASSSSPP SPLLLAWPPT SPPPRGLATA EPAAHATADM ENSP00000379366/1-221 ---MEGATDV NESGSRSSK- -----TFKPK KNIPEGSHQY ELLKHAEATL bmy_18436T0/1-248 MSFLFLKSEV NTSGSRSSK- -----TFKPK KNIPEGSHQY ELLKHAEATL ENSBTAP00000021671/1-216 MSFLF----- ---GSRSSK- -----TFKPK KNIPEGSHQY ELLKHAEATL 51 100 ENSTTRP00000007968/1-265 SFLXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000379366/1-221 G--------- ---------- ---------- ------SGNL RMAVMLPEGE bmy_18436T0/1-248 G--------- ---------- ---------- ------SGNL RMAVMLPEGE ENSBTAP00000021671/1-216 G--------- ---------- ---------- ------SGNL RMAVMLPEGE 101 150 ENSTTRP00000007968/1-265 XXXXXXXXXX VDFFNQINML YGTITDFCTE ESCPVMSAGP KYEYHWADGT ENSP00000379366/1-221 DLNEWVAVNT VDFFNQINML YGTITDFCTE ESCPVMSAGP KYEYHWADGT bmy_18436T0/1-248 DLNEWVAVNT VDFFNQINML YGTITDFCTE ESCPVMSAGP KYEYHWADGT ENSBTAP00000021671/1-216 DLNEWVAVNT VDFFNQINML YGTITDFCTE ESCPVMSAGP KYEYHWADGT 151 200 ENSTTRP00000007968/1-265 NIKKPIKCSA PKYIDYLMTW VQDQLDDETL FPSKI----- ---------- ENSP00000379366/1-221 NIKKPIKCSA PKYIDYLMTW VQDQLDDETL FPSKI----- ---------- bmy_18436T0/1-248 NIKKPIKCSA PKYIDYLMTW VQDQLDDETL FPSKIGILNK TKHSNTLFVF ENSBTAP00000021671/1-216 NIKKPIKCSA PKYIDYLMTW VQDQLDDETL FPSKI----- ---------- 201 250 ENSTTRP00000007968/1-265 ---------G VPFPKNFMSV AKTILKRLFR VYAHIYHQHF DPVIQLQEEA ENSP00000379366/1-221 ---------G VPFPKNFMSV AKTILKRLFR VYAHIYHQHF DPVIQLQEEA bmy_18436T0/1-248 SRGLFIYLLG VPFPKNFMSV AKTILKRLFR VYAHIYHQHF DPVIQLQEEA ENSBTAP00000021671/1-216 ---------G VPFPKNFMSV AKTILKRLFR VYAHIYHQHF DPVIQLQEEA 251 300 ENSTTRP00000007968/1-265 HLNTSFKHFI FFVQEFNLID RRELAPLQEL IEKLTSKDR ENSP00000379366/1-221 HLNTSFKHFI FFVQEFNLID RRELAPLQEL IEKLTSKDR bmy_18436T0/1-248 HLNTSFKHFI FFVQEFNLID RRELAPLQEL IEKLTSKDR ENSBTAP00000021671/1-216 HLNTSFKHFI FFVQEFNLID RRELAPLQEL IEKLTSKDR