KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:07 2014 Check: 00 .. Name: ENSP00000474003/1-450 Len: 484 Check: 7356 Weight: 1.00 Name: ENSBTAP00000021676/1-450 Len: 484 Check: 2492 Weight: 1.00 Name: bmy_11649T0/1-473 Len: 484 Check: 2033 Weight: 1.00 Name: ENSTTRP00000013487/1-285 Len: 484 Check: 455 Weight: 1.00 // 1 50 ENSP00000474003/1-450 MASAITQCST SELTCSICTD YLTDPVTICC GHRFCSPCLC LLWEDTLTPN ENSBTAP00000021676/1-450 MASASAQCLP TEIICSICKD TFTDPATIRC GHRFCTPCLC LLWEDAPTVT bmy_11649T0/1-473 MESAFTQCFP SEFICFICKD NFTDPVTISC GHRFCTPCLC LLWEDAQTAT ENSTTRP00000013487/1-285 --SAFTQCFP SEFICSICKD NFTDPVTISC GHRFCTPCLC LLWEDVQTAP 51 100 ENSP00000474003/1-450 CCPVCREISQ QMYFKRIIFA EKQVIPTRES VPCQLSSSAM LICRRHQEIK ENSBTAP00000021676/1-450 CCPVCKAASP KMDLKSTILA KKHIRSTGNS VICQLPGSAK QMCRTHQVIK bmy_11649T0/1-473 CCPVCKAISP KMDFKSTLLA KEHILPTRES VVCQLPSSAK QMCRIHQVIK ENSTTRP00000013487/1-285 CCPVCKAVSP KMDFKSTIFA KEHVLPTRGS VVCQLPSSAK QMCRIHQVIK 101 150 ENSP00000474003/1-450 NLICETDRSL LCFLCSQSPR HATHKHYMTR EADEYYRKKL LIQMKSIWKK ENSBTAP00000021676/1-450 LYFCEADKSL LCLFCSRSTG HATHEHYSVV QVAEHYREHL LMQMKSIWKK bmy_11649T0/1-473 LYFCQTDKSL LCLFCSHSPE HAAHEHYPVK QVAEHYRENL LMQMKSIWKK ENSTTRP00000013487/1-285 LYFCQTDKSL LCLFCSHSPE HATHEHYPVK QVAEHYRE-- --------KE 151 200 ENSP00000474003/1-450 KQKNQRNLNR ETNIIGTWE- ---------- ---------- --VFIN---- ENSBTAP00000021676/1-450 KQENQRNIKK VTNTFRAWE- ---------- ---------- --GFIN---- bmy_11649T0/1-473 KKENQSNIKK VTNIFRVWEN SVTSKEDIST GYSREYVIKQ KSGFVN---- ENSTTRP00000013487/1-285 KRKSEKYKKS DQHIQSMGD- ---------- ---------- --GFPNKPLI 201 250 ENSP00000474003/1-450 -------LRS MMISAEYPKV CQYLREEEQK HVESLAREGR IIFQQLKRSQ ENSBTAP00000021676/1-450 -------LRL VMIRAEYPKV CQYLQEEKQK HLEMLAIEGT VIFQRLNRNV bmy_11649T0/1-473 -------LRM VMIGAEYPKV YQYLQEEKQK HLEMLAIEGK IVFQRLRRNV ENSTTRP00000013487/1-285 HEQRKQDLRM VMIGAEYPKV YQYLQEEKQK HLEMLAIEGK IVFQRLRRNV 251 300 ENSP00000474003/1-450 TRMAKMGILL REMYEKLKEM SCKADVNLPQ DLGDVMKRNE FLRLAMPQPV ENSBTAP00000021676/1-450 ARMIHMGKLL RKTYEELKEM CLKADVDMLQ GVEDTMKRSQ LMQLYIPQPL bmy_11649T0/1-473 ARMVHMGKLL RRIYEELKEL CLKADVDMLQ GVXDTMKRSH LMQLYIPQPM ENSTTRP00000013487/1-285 ARMVHMGKLL RRIYEELKEL CLKADVDMLQ DVGDTMKRSQ LMQLYIPQPM 301 350 ENSP00000474003/1-450 NPQLSAWTIT GVSERLNFFR VYITLDRKIC SNHKLLFEDL RHLQCSLDDT ENSBTAP00000021676/1-450 DPQLSTWTIT GMLERLNSFR VYITLDGKIR NGCVPLIEAL RRLQCGPVDR bmy_11649T0/1-473 DPQLSTWAIT GMLERLNSFR VYVTLDHKIR NCHVALTEDL RRLQCSPDHQ ENSTTRP00000013487/1-285 DPQLSTWAIT GMLERLNSFR ---------- ---------- ---------- 351 400 ENSP00000474003/1-450 DMSCNPTSTQ YTSSWGAQIL SSGKHYWEVD VKDSCNWVIG LCREAWTKRN ENSBTAP00000021676/1-450 DVPWDAACPE NTPTWGAQTF TAGKHYWEVD VGNSGDWVIG LCKESWTSRN bmy_11649T0/1-473 DVPHNPASSE NTPSWGAQTF TTGKHYWEVN VGNSRNWIIG LCKESWTSRN ENSTTRP00000013487/1-285 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000474003/1-450 DMRLDSEGIF LLLCLKVDDH FSLFSTSPLL PHYIPRPQGW LGVFLDYECG ENSBTAP00000021676/1-450 DMLLNSEDIF LLLCVSKDGH FSLFSTFPFL PHYIQRPQGY IGVFLDYECG bmy_11649T0/1-473 DMLLNSEDIF LLLCVSVEDH FSLFSTFPLL PHYIQRPQGW IGVFLDYECG ENSTTRP00000013487/1-285 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000474003/1-450 IVSFVNVAQS SLICSFLSRI FYFPLRPFIC HGSK ENSBTAP00000021676/1-450 MISFINVARG SLICNFLSRS FSFPLRPFIW CGPK bmy_11649T0/1-473 IISFINVARS SLICNFLSRS FSFPLRPFIW CGPK ENSTTRP00000013487/1-285 ---------- ---------- ---------- ----