KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:07 2014 Check: 00 .. Name: ENSBTAP00000021685/1-314 Len: 324 Check: 7925 Weight: 1.00 Name: ENSP00000320096/1-323 Len: 324 Check: 77 Weight: 1.00 Name: bmy_16766T0/1-322 Len: 324 Check: 8882 Weight: 1.00 Name: BACU009034/1-322 Len: 324 Check: 7491 Weight: 1.00 Name: ENSTTRP00000001750/1-296 Len: 324 Check: 8721 Weight: 1.00 // 1 50 ENSBTAP00000021685/1-314 MAAARPEPPS PSSAAPEPPS SEPPDVVLVH DDGRPATPPS DLIEIQVVKV ENSP00000320096/1-323 MAAARPEAQS RSSPTPESRS QEPLDLVLVP DDCRPGTPPS DLIEIQVVKV bmy_16766T0/1-322 MAAARPEPLS PSSAAPEPRS PEPPDLVLVP DDSRPATPPS DLIEIQVVKV BACU009034/1-322 MAAARPEPPS PRSAAPEPRS PEPPDLVLVP DDSRPATPPS DLIEIQVVKV ENSTTRP00000001750/1-296 ---------- ---------- ------VLVP DDSRPATPPS DLIEIQVVKV 51 100 ENSBTAP00000021685/1-314 TDTTLVPEPP EPGSLHCALC PAAFRLVSEL LFHEHGHLAG AEGGGQGGDP ENSP00000320096/1-323 TDTTLVPEPP EPGSFHCALC PAAFRLVSEL LFHEHGHLAG AEGGGQGGDP bmy_16766T0/1-322 TDTTLVPEPP EPGSLHCALC PAVFRLVSEL LFHEHGHLAG AEGGGQGGDP BACU009034/1-322 TDTTLVPEPP EPGSLHCALC PAVFRLVSEL LFHEHGHLAG AEGGGQGGDP ENSTTRP00000001750/1-296 TDTTLVPEPP EPGSLHCALC PAVFRLVSEL LFHEHGHLAG AEGGGQGGDP 101 150 ENSBTAP00000021685/1-314 SRCHVCGHSC PGPASLRAHY SLHTGERPYR CALCPRAFKA LAPLLRHQHR ENSP00000320096/1-323 SRCHVCGHSC PGPASLRAHY SLHTGERPYR CALCPRAFKA LAPLLRHQHR bmy_16766T0/1-322 SRCHVCGHSC PGPASLRAHY SLHTGERPYR CPLCPRAFKA LAPLLRHQHR BACU009034/1-322 SRCHVCGHSC PGPASLRAHY SLHTGERPYR CPLCPRAFKA LAPLLRHQHR ENSTTRP00000001750/1-296 SRCHVCGHSC PGPASLRAHY SLHTGERPYR CPLCPRAFKA LAPLLRHQHR 151 200 ENSBTAP00000021685/1-314 HGVEPGAPRR PPEAAAATPE QRTGAPPERS EVVLAAAAAG AAVGKPFACR ENSP00000320096/1-323 HGVEPGTSRR PPDTAAVA-E QRPGVAPERA EVVMAAAAAG AAVGKPFACR bmy_16766T0/1-322 HGVEPGTSQR PPEVAAAQ-E QRPGVPQERS EVVMAAAAAG AAVGKPFACR BACU009034/1-322 HGVEPGTSQR PPEAAAAQ-E QRPGVPQERS EVVMAAAAAG AAVGKPFACR ENSTTRP00000001750/1-296 HGVEPGTSQR PPEAAAAQ-E QRPGVPQERS EVVMAAAAAG AAVGKPFACR 201 250 ENSBTAP00000021685/1-314 FCAKPFRRSS DMLDHERVHT GERPYHCGVC GKGFTQSSVL SVHARIHTGE ENSP00000320096/1-323 FCAKPFRRSS DMRDHERVHT GERPYHCGIC GKGFTQSSVL SGHARIHTGE bmy_16766T0/1-322 FCAKPFRRSS DMRDHERVHT GERPYHCGVC GKGFTQSSVL SGHARIHTGE BACU009034/1-322 FCAKPFRRSS DMRDHERVHT GERPYHCGVC GKGFTQSSVL SGHARIHTGE ENSTTRP00000001750/1-296 FCAKPFRRSS DMRDHERVHT GERPYHCGVC GKGFTQSSVL SGHARIHTGE 251 300 ENSBTAP00000021685/1-314 RPFRCSLCDR TFNNSSNFRK HQRTHVHGRG R--GTLGARW -HRGLRGRGA ENSP00000320096/1-323 RPFRCTLCDR TFNNSSNFRK HQRTHFHGPG PGLGDSGGQL GSSAAEGSGS bmy_16766T0/1-322 RPFRCALCDR TFNNSSNFRK HQRTHFHGPG PGLGDSGSQL -ASGAEGSGS BACU009034/1-322 RPFRCALCDR TFNNSSNFRK HQRTHFHGPG PGLGDSGSQL -ASGAEGSGS ENSTTRP00000001750/1-296 RPFRCTLCDR TFNNSSNFRK HQRTHFHGPG PGLGDSGSQL -ASGADGSGS 301 350 ENSBTAP00000021685/1-314 GVGQGTLLKR GVGRRPE--- ---- ENSP00000320096/1-323 GCGVGDPAEE GRGETAKVKV EADQ bmy_16766T0/1-322 GCGAGNTLEE GRGETAKVKV EINQ BACU009034/1-322 GCGAGNTLEE GRGETSKEKV EIDQ ENSTTRP00000001750/1-296 GCGAGNTLEE GRGETAKLKV EIDQ