KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:07 2014 Check: 00 .. Name: bmy_11835T0/1-476 Len: 591 Check: 2163 Weight: 1.00 Name: ENSTTRP00000015124/1-581 Len: 591 Check: 4912 Weight: 1.00 Name: ENSP00000360184/1-589 Len: 591 Check: 7043 Weight: 1.00 Name: ENSBTAP00000021686/1-587 Len: 591 Check: 3724 Weight: 1.00 // 1 50 bmy_11835T0/1-476 MRPLPGAPGV AAAAAL-LLL LLLPRARADE HEHTCTD--- ---------- ENSTTRP00000015124/1-581 MRPLLGAPGV AAAAAL-LML LLLPRARADE HDHTYQDEEE VVLWMNTVGP ENSP00000360184/1-589 MRPLPGALGV AAAAALWLLL LLLPRTRADE HEHTYQDKEE VVLWMNTVGP ENSBTAP00000021686/1-587 MRPLPGAPGV AAAAA--LLL LLLPRARADE HEHTYQDKEE VVLWMNTVGP 51 100 bmy_11835T0/1-476 ---------- ---------- ---------- --------LQ F----LFYAD ENSTTRP00000015124/1-581 YHNRQETYKY FSLPFCVGSK KSISHYHETL GEALQGVELE FSGLDIKFRD ENSP00000360184/1-589 YHNRQETYKY FSLPFCVGSK KSISHYHETL GEALQGVELE FSGLDIKFKD ENSBTAP00000021686/1-587 YHNRQETYKY FSLPFCVGSK KSISHYHETL GEALQGVELE FSGLDIKFKD 101 150 bmy_11835T0/1-476 DVMPATYCEI DLDKEKRDAF VYAIKNHYWY QMYIDDLPIW GIVGEADENG ENSTTRP00000015124/1-581 DMMPATYCEI DLDKEKRDAF VYAIKNHYWY QMYIDDLPIW GIVGEADENG ENSP00000360184/1-589 DVMPATYCEI DLDKEKRDAF VYAIKNHYWY QMYIDDLPIW GIVGEADENG ENSBTAP00000021686/1-587 DVMPGTYCEI DLDKEKRDAF VYAIKNHYWY QMYIDDLPIW GIVGEADENG 151 200 bmy_11835T0/1-476 EDYYLWTYKK LEIGFNGNRI VDVNLTSEGK VKLVPNTKIQ MSYSVKWKKS ENSTTRP00000015124/1-581 EDYYLWTYKK LEIGFNGNRI VDVNLTSEGK VKLVPNTKIQ MSYSVKWKKS ENSP00000360184/1-589 EDYYLWTYKK LEIGFNGNRI VDVNLTSEGK VKLVPNTKIQ MSYSVKWKKS ENSBTAP00000021686/1-587 EDYYLWTYKK LEIGFNGNRI VDVNLTSEGK VKLVPNTKIQ MSYSVKWKKS 201 250 bmy_11835T0/1-476 DVKFEDRFDK YLDPSFFQHR IHWFSIFNSF MMVIFLVGLV SMILMRTLRK ENSTTRP00000015124/1-581 DVKFEDRFDK YLDPSFFQHR IHWFSIFNSF MMVIFLVGLV SMILMRTLRK ENSP00000360184/1-589 DVKFEDRFDK YLDPSFFQHR IHWFSIFNSF MMVIFLVGLV SMILMRTLRK ENSBTAP00000021686/1-587 DVKFEDRFDK YLDPSFFQHR IHWFSIFNSF MMVIFLVGLV SMILMRTLRK 251 300 bmy_11835T0/1-476 DYARYSKEEE MDDMDRDLGD EYGWKQVHGD VFRPSSHPLI FSSLIGSGCQ ENSTTRP00000015124/1-581 DYARYSKEEE MDDMDRDLGD EYGWKQVHGD VFRPSSHPLI FSSLIGSGCQ ENSP00000360184/1-589 DYARYSKEEE MDDMDRDLGD EYGWKQVHGD VFRPSSHPLI FSSLIGSGCQ ENSBTAP00000021686/1-587 DYARYSKEEE MDDMDRDLGD EYGWKQVHGD VFRPSSHPLI FSSLIGSGCQ 301 350 bmy_11835T0/1-476 IFAVSLIVII VAMIEDLYTE RGSMLSTAIF VYAATSP--V NGYFGGSLYA ENSTTRP00000015124/1-581 IFAVSLIVII VAMIEDLYTE RGSMLSTAIF VYAATSSDAI VGY------- ENSP00000360184/1-589 IFAVSLIVII VAMIEDLYTE RGSMLSTAIF VYAATSP--V NGYFGGSLYA ENSBTAP00000021686/1-587 IFAVSLIVII VAMIEDLYTE RGSMLSTAIF VYAATSP--V NGYFGGSLYA 351 400 bmy_11835T0/1-476 RQGGRRWIKQ MFIGAFLIPA MVCGTAFFIN FIAIYYHASR AIPFGTMVS- ENSTTRP00000015124/1-581 --AGRRWIKQ MFIGAFLIPA MVCGTAFFIN FIAIYYHASR AIPFGTMVAV ENSP00000360184/1-589 RQGGRRWIKQ MFIGAFLIPA MVCGTAFFIN FIAIYYHASR AIPFGTMVAV ENSBTAP00000021686/1-587 RQGGRRWIKQ MFIGAFLIPA MVCGTAFFIN FIAIYYHASR AIPFGTMVAV 401 450 bmy_11835T0/1-476 ---CLHLTFK LKEYKHSLT- ---------- ---------- ----FMEPAV ENSTTRP00000015124/1-581 CCICFFVILP LNLVGTILGR NLSGQPNFPC RVNAVPRPIP EKKWFMEPAV ENSP00000360184/1-589 CCICFFVILP LNLVGTILGR NLSGQPNFPC RVNAVPRPIP EKKWFMEPAV ENSBTAP00000021686/1-587 CCICFFVILP LNLVGTILGR NLSGQPNFPC RVNAVPRPIP EKKWFMEPAV 451 500 bmy_11835T0/1-476 IVCLGGILPF GSIFIEMYFI FTSFWAYKIY YVYGFMMLVL VILCIVTVCV ENSTTRP00000015124/1-581 IVCLGGILPF GSIFIEMYFI FTSFWAYKIY YVYGFMMLVL VILCIVTVCV ENSP00000360184/1-589 IVCLGGILPF GSIFIEMYFI FTSFWAYKIY YVYGFMMLVL VILCIVTVCV ENSBTAP00000021686/1-587 IVCLGGILPF GSIFIEMYFI FTSFWAYKIY YVYGFMMLVL VILCIVTVCV 501 550 bmy_11835T0/1-476 TIVCTYFLLN AEDYRW---- ---------- ---------- ----MYGLFQ ENSTTRP00000015124/1-581 TIVCTYFLLN AEDYRWQWTS FLSAASTAIY VYMYSFYYYF FKTKMYGLFQ ENSP00000360184/1-589 TIVCTYFLLN AEDYRWQWTS FLSAASTAIY VYMYSFYYYF FKTKMYGLFQ ENSBTAP00000021686/1-587 TIVCTYFLLN AEDYRWQWTS FLSAASTAIY VYMYSFYYYF FKTKMYGLFQ 551 600 bmy_11835T0/1-476 TSFYFGYMAV FSTALGIMCG AIGYMGTSAF VRKIYTNVKI D ENSTTRP00000015124/1-581 TSFYFGYMAV FSTALGIMCG AIGYMGTSAF VRKIYTNVKI D ENSP00000360184/1-589 TSFYFGYMAV FSTALGIMCG AIGYMGTSAF VRKIYTNVKI D ENSBTAP00000021686/1-587 TSFYFGYMAV FSTALGIMCG AIGYMGTSAF VRKIYTNVKI D