KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:08 2014 Check: 00 .. Name: ENSTTRP00000014976/1-231 Len: 305 Check: 7059 Weight: 1.00 Name: ENSBTAP00000021699/1-247 Len: 305 Check: 6231 Weight: 1.00 Name: bmy_07902T0/1-305 Len: 305 Check: 2091 Weight: 1.00 Name: BACU010748/1-247 Len: 305 Check: 6437 Weight: 1.00 // 1 50 ENSTTRP00000014976/1-231 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021699/1-247 ---------- ---------- ---------- ---------- ---------- bmy_07902T0/1-305 PPLPTGSGSE EGVAWLPLSN AGGHVTQPAD SGGASLSGWA CCSRDCPARD BACU010748/1-247 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000014976/1-231 ---------- ---------- --AQTIMRAR LKGAQTGRNL LKKKSDALTL ENSBTAP00000021699/1-247 --------MS GKDRIEIFPS RMAQTIMKAR LKGAQTGRNL LKKKSDALTL bmy_07902T0/1-305 PGRTVIVRMS GKDRIEIFPS RMAQTIMRAR LKGAQTGRNL LKKKSDALTL BACU010748/1-247 --------MS GKDRIEIFPS RMAQTIMRAR LKGAQTGRNL LKKKSDALTL 101 150 ENSTTRP00000014976/1-231 RFRQILKKII ETKMLMGEVM REAAFSLAVK --TAGDFSTT VIQNVNKAQV ENSBTAP00000021699/1-247 RFRQILKKII ETKMLMGEVM REAAFSLAEA KFTAGDFSTT VIQNVNKAQV bmy_07902T0/1-305 RFRQILKKII ETKMLMGEVM REAAFSLAEA KFTAGDFSTT VIQNVNKAQV BACU010748/1-247 RFRQILKKII ETKMLMGEVM REAAFSLAEA KFTAGDFSTT VIQNVNKAQV 151 200 ENSTTRP00000014976/1-231 KIRAKKDNVA GVTLPVFEHY HEGTDSYELT GLARGGEQLA KLKRNYAKAV ENSBTAP00000021699/1-247 KIRAKKDNVA GVTLPVFEHY HEGTDSYELT GLARGGEQLA KLKRNYAKAV bmy_07902T0/1-305 KIRAKKDNVA GVTLPVFEHY HEGTDSYELT GLARGGEQLA KLKRNYAKAV BACU010748/1-247 KIRAKKDNVA GVTLPVFEHY HEGTDSYELT GLARGGEQLA KLKRNYAKAV 201 250 ENSTTRP00000014976/1-231 ELLVELASLQ TSFVTLDEAI KITNRRVNAI EHVIIPRIER TLAYIITELD ENSBTAP00000021699/1-247 ELLVELASLQ TSFVTLDEAI KITNRRVNAI EHVIIPRIER TLAYIITELD bmy_07902T0/1-305 ELLVELASLQ TSFVTLDEAI KITNRRVNAI EHVIIPRIER TLAYIITELD BACU010748/1-247 ELLVELASLQ TSFVTLDEAI KITNRRVNAI EHVIIPRIER TLAYIITELD 251 300 ENSTTRP00000014976/1-231 EREREEFYRL KKIQEKKKIL KEKSEKDLEQ RKAAGEVMEP ANLLAEEKDE ENSBTAP00000021699/1-247 EREREEFYRL KKIQEKKKIL KEKSDKDLEQ RRAAGEVIEP ANLLAEEKDE bmy_07902T0/1-305 EREREEFYRL KKIQEKKKIL KEKSEKDLEQ RRAAGEVMEP ANLLAEEKDE BACU010748/1-247 EREREEFYRL KKIQEKKKIL KEKSEKDLEQ RRAAGEVMEP ANLLAEEKDE 301 350 ENSTTRP00000014976/1-231 DLLFE ENSBTAP00000021699/1-247 DLLFE bmy_07902T0/1-305 DLLFE BACU010748/1-247 DLLFE