KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:09 2014 Check: 00 .. Name: ENSP00000315006/1-658 Len: 664 Check: 6748 Weight: 1.00 Name: ENSTTRP00000014049/1-658 Len: 664 Check: 9014 Weight: 1.00 Name: ENSBTAP00000021720/1-659 Len: 664 Check: 6844 Weight: 1.00 Name: bmy_12674T0/1-647 Len: 664 Check: 1193 Weight: 1.00 Name: BACU002853/1-660 Len: 664 Check: 4420 Weight: 1.00 // 1 50 ENSP00000315006/1-658 MEKASGRQSI ALSTVETGTV NPGLELMEKE VEPEGSKRTD AQGHSLGDGL ENSTTRP00000014049/1-658 MEKTNGREGI ALSTVEIGIE NPGLELTEEG INPEGTRKIE ERGHSLGDGL ENSBTAP00000021720/1-659 MEKTNGKEAF ALTTVETGIQ NPGLELTEEG INPEGSKRAE EQGHSLKGGL bmy_12674T0/1-647 MEKTNGREGI ALSTVETGIG NPGLELTEEG INPEGTRKTE EQGHSLGDGL BACU002853/1-660 MEKTNGREGI ALSTVETGIE NPGLELMEEG INPEGTRKTE EQGHSLGDGL 51 100 ENSP00000315006/1-658 GPSTYQ--RR SRWPFSKARS FCKTHASLFK KILLGLLCLA YAAYLLAACI ENSTTRP00000014049/1-658 ERPTQQ--RR NLQPFTRARS FCKTHAALFK KVLLSLLCLA YAAYFLAACI ENSBTAP00000021720/1-659 EPPTRL--RR TLQPFTRARS FCKTHAGLFK KILLSLLCLA YAAYFLAACI bmy_12674T0/1-647 EPPTQQ--RR NLQPFTRARS FCKTHAGLFK KILLSLLCLA YAAYFLAACI BACU002853/1-660 EPPTQQRYRR NLQPFTRARS FCKTHAGLFK KILLSLLCLA YAAYFLAACI 101 150 ENSP00000315006/1-658 LNFQRALALF VITCLVIFVL VHSFLKKLLG KKLTRCLKPF ENSRLRLWTK ENSTTRP00000014049/1-658 LNFHRALALF VLTCLVLLVL VHRFLKRFFG EKLTRCLKPL ENSCLKLWMK ENSBTAP00000021720/1-659 LDFHRALALF VLTCLVLLVL VHRFLKRLFG EKLTRCLKPL ENSRLKFWMK bmy_12674T0/1-647 LNFHRALALF VLTCLVLLVL VHRFLKRFFG EKLTRCLKPL ENSCLKLWMK BACU002853/1-660 LNFHRALALF VLTCLVLLVL VHRFLKRFFG EKLTRCLKPL ENSCLKLWMK 151 200 ENSP00000315006/1-658 WVFAGVSLVG LILWLALDTA QRPEQLIPFA GICMFILILF ACSKHHSAVS ENSTTRP00000014049/1-658 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVS ENSBTAP00000021720/1-659 WVLAGVSLIG LILWLALDTA QRPEQLISFA GICMFIIILF ACSKHHSAVS bmy_12674T0/1-647 RVFAGVFLVG LILWLVLDTA QRPEQLISFA GICMFTLILF ACSKHHSAVS BACU002853/1-660 GVFVGVFLVG LILWLVLDTA QRPEQLISFT GICMFTLILF ACSRHHSAVS 201 250 ENSP00000315006/1-658 WRTVFSGLGL QFVFGILVIR TDLGYTVFQW LGEQVQIFLN YTVAGSSFVF ENSTTRP00000014049/1-658 WRAVLWGLGL QFVFGILVIR TDPGFNAFQW LGNQIQIFLN YTVAGSSFVF ENSBTAP00000021720/1-659 WRAVLWGLGL QFVFGILVIR TDPGFNAFQW LGEQVQIFLS YTVAGSSFVF bmy_12674T0/1-647 WRAVLWGLGL QFVFGILVIR TDPGFNAFQW LGNQIQIFLN YTVAGSSFVF BACU002853/1-660 WRTVLWGLGL QFVFGILVIR TDPGFNAFQW LGNQIQIFLN YTVAGSSFVF 251 300 ENSP00000315006/1-658 GDTLVKDVFA FQALPIIIFF GCVVSILYYL G--LVQWVVQ KVAWFLQI-T ENSTTRP00000014049/1-658 GDMLVKDIFA FQALPIILFF GCVMSILYYL G--FVQWVVQ KIAWFLQI-T ENSBTAP00000021720/1-659 GDVLVKDVFA FQALPIILFF GCVMSILYYL G--LVQWVVQ KIAWFLQI-T bmy_12674T0/1-647 GDMLVKDIFA FQVI------ -CFMSKNERL TDHPFLWMCD VHSLLPGLCA BACU002853/1-660 GDMLVKDIFA FQALPIILFF GCVMSILYYL G--FVQWVVQ KIAWFLQI-T 301 350 ENSP00000315006/1-658 MGTTATETLA VAGNIFVGMT EAPLLIRPYL GDMTLSEIHA VMTGGFATIS ENSTTRP00000014049/1-658 MGTTAPETLA VAGNIFVGMT EAPLLIRPYL ADMTLSEVHA VMTGGFATIS ENSBTAP00000021720/1-659 MGTTATETLA VAGNIFVGMT EAPLLIRPYL ADMTLSEIHA VMTGGFATIS bmy_12674T0/1-647 VGSSE----- --GESFSCTT EAPLLIRPYL ADMTLSEVHA VMTGGFATIS BACU002853/1-660 MGTTATETLA VAGNIFVGMT EAPLLIRPYL ADMTLSEVHA VMTGGFATIS 351 400 ENSP00000315006/1-658 GTVLGAFIAF GVDASSLISA SVMAAPCALA SSKLAYPEVE ESKFKSEEGV ENSTTRP00000014049/1-658 GTVLGAFISF GIDTSSLISA SVMAAPSALA LSKLVYPEVE ESKFKNKEGV ENSBTAP00000021720/1-659 GTVLGAFISF GIDASSLISA SVMAAPSALA LSKLVYPEVE ESKFKNKEGV bmy_12674T0/1-647 GTVLGAFISF GIDASSLISA SVMAAPSALA LSKLVYPEVE ESKFKNKEGV BACU002853/1-660 GTVLGAFISF GIDASSLISA SVMAAPSALA LSKLVYPEVE ESKFKNKEGV 401 450 ENSP00000315006/1-658 KLPRGKERNV LEAASNGAVD AIGLATNVAA NLIAFLAVLA FINAALSWLG ENSTTRP00000014049/1-658 KLPRGKEKNV LEAASNGATD AIGLAANVAA NLIAFLAVLA FINAALSWLG ENSBTAP00000021720/1-659 KLPRGKEKNV LEAASNGATD AVGLASNVAA NLIAFLAVLA FINAALSWLG bmy_12674T0/1-647 KLPRGKEKSV LEAASNGATD AIGLAANIAA NLIAFLAVLA FINAALSWLG BACU002853/1-660 KLPRGKEKSV LEAASNGATD AIGLAANIAA NLIAFLAVLA FINAALSWLG 451 500 ENSP00000315006/1-658 ELVDIQGLTF QVICSYLLRP MVFMMGVEWT DCPMVAEMVG IKFFINEFVA ENSTTRP00000014049/1-658 ELVDIQGLTF QVICSYILRP MVFMMGVEWA DCPMVAEMVG IKFFTNEFVA ENSBTAP00000021720/1-659 EMVDIQGLTF QVICSYVLRP MVFMMGVEWA DCPMVAEMVG MKFFTNEFVA bmy_12674T0/1-647 ELVDIQGLTF QVICSYILRP VVFMMGVEWA DCPMVAEMVG IKFFTNEFVA BACU002853/1-660 ELVDIQGLTF QVICSYILRP MVFMMGVEWA DCPMVAEMVG IKFFTNEFVA 501 550 ENSP00000315006/1-658 YQQLSQYKNK RLSGMEEWIE GEKQWISVRA EIITTFSLCG FANLSSIGIT ENSTTRP00000014049/1-658 YQQLSQYKNK RLSGVEEWIG GEKQWISVRA EIITTFSLCG FANLSSIGIT ENSBTAP00000021720/1-659 YQQLSQYKNK RLSGVEEWIE GKKQWISVRA EIITTFSLCG FANLSSIGIT bmy_12674T0/1-647 YQQLSQYKNK RLSGVEEWIG GEKQWISVRA EIITTFSLCG FANLSSIGIT BACU002853/1-660 YQQLSQYKNK RLSGVEEWIG GEKQWISVRA EIITTFSLCG FANLSSIGIT 551 600 ENSP00000315006/1-658 LGGLTSIVPH RKSDLSKVVV RALFTGACVS LISACMAGIL YVPRGAEADC ENSTTRP00000014049/1-658 LGGLTSMVPH RKSDLSKVVV SALFTGACVS LISACVAGIL YVPRGAETDC ENSBTAP00000021720/1-659 LGGLTSMVPH RKSDLSKVVV SALFTGACVS LISACVAGIL YVPRGAETDC bmy_12674T0/1-647 LGGLTSMVPH RKSDLSKVVV SALFTGACVS LISACVAGIL YVPRGAETDC BACU002853/1-660 LGGLTSMVPH RKSDLSKVVV SALFTGACVS LISACMAGIL YVPRGAETDC 601 650 ENSP00000315006/1-658 VSFPNTSFTN RTYETYMCCR GLFQSTSLNG T-NPPSFSGP WEDKEFSAMA ENSTTRP00000014049/1-658 VSFLNTSFTN RTYETYVCCR ELFRSTSLNG T-NPPSFPGP WEDKEFSAIA ENSBTAP00000021720/1-659 VSFLNTSFTN RTYETYVCCR ELFQSTSLNG TYNPPSFSGP WEDKEFSAIA bmy_12674T0/1-647 VSFLNTSFTN RTYETYVCCR ELFRSTSLNG T-NPPSFPGP WEDKGFSAIA BACU002853/1-660 LSFLNTSFTN RTYETYVCCR ELFRSTSLNG T-NPPSFPGP WEDKEFSAIA 651 700 ENSP00000315006/1-658 LTNCCGFYNN TVCA ENSTTRP00000014049/1-658 LAKCCDLYTN AVCA ENSBTAP00000021720/1-659 LYNCCDLYTS AVCV bmy_12674T0/1-647 LAKCCDLYTN AVCA BACU002853/1-660 LAKCCDLYTN AVCA