KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:12 2014 Check: 00 .. Name: ENSTTRP00000014170/1-916 Len: 916 Check: 3267 Weight: 1.00 Name: bmy_12657T0/1-684 Len: 916 Check: 79 Weight: 1.00 Name: BACU012379/1-916 Len: 916 Check: 9008 Weight: 1.00 Name: ENSBTAP00000021734/1-916 Len: 916 Check: 7220 Weight: 1.00 Name: ENSP00000354850/1-916 Len: 916 Check: 8938 Weight: 1.00 // 1 50 ENSTTRP00000014170/1-916 MVQKESQAAL EERESELNSN PAASAGASLE PQAAPAPGED NPAGAGGAAV bmy_12657T0/1-684 MVQKESQAAL EERESELNSN PAASAGASLE PQAAPAPGED NPTGAGGAAV BACU012379/1-916 MVQKESQAAL EERESELNSN PAASRGASLE PQAAPAPGED NPTGAGGAAV ENSBTAP00000021734/1-916 MVQKESQAAL EERESELNSN PAASAGASLE PQAAPAPGED NPTGAGGAAV ENSP00000354850/1-916 MVQKESQATL EERESELSSN PAASAGASLE PPAAPAPGED NPAGAGGAAV 51 100 ENSTTRP00000014170/1-916 AGAAGGARRF LCGVVEGFXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12657T0/1-684 AGAAGGARRF LCGVVEGFYG RPWVMEQRKE LFRRLQKWEL NTYLYAPKDD BACU012379/1-916 AGAAGGARRF LCGVVEGFYG RPWVMEQRKE LFRRLQKWEL NTYLYAPKDD ENSBTAP00000021734/1-916 AGAAGGARRF LCGVVEGFYG RPWVMEQRKE LFRRLQKWEL NTYLYAPKDD ENSP00000354850/1-916 AGAAGGARRF LCGVVEGFYG RPWVMEQRKE LFRRLQKWEL NTYLYAPKDD 101 150 ENSTTRP00000014170/1-916 XXXXXXXXXX XXXEEAEQLM TLISAAREYE IEFIYAISPG LDITFSNPKE bmy_12657T0/1-684 YKHRMFWREM YSVEEAEQLM TLISAAREYE IEFIYAISPG LDITFSNPKE BACU012379/1-916 YKHRMFWREM YSVEEAEQLM TLISAAREYE IEFIYAISPG LDITFSNPKE ENSBTAP00000021734/1-916 YKHRMFWREM YSVEEAEQLM TLISAAREYE IEFIYAISPG LDITFSNPKE ENSP00000354850/1-916 YKHRMFWREM YSVEEAEQLM TLISAAREYE IEFIYAISPG LDITFSNPKE 151 200 ENSTTRP00000014170/1-916 VSTLKRKLDQ XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12657T0/1-684 VSTLKRKLDQ VSQFGCRSFA LLFDDIDHNM CAADKEVFSS FAHAQVSITN BACU012379/1-916 VSTLKRKLDQ VSQFGCRSFA LLFDDIDHNM CAADKEVFSS FAHAQVSITN ENSBTAP00000021734/1-916 VSTLKRKLDQ VSQFGCRSFA LLFDDIDHNM CAADKEVFSS FAHAQVSITN ENSP00000354850/1-916 VSTLKRKLDQ VSQFGCRSFA LLFDDIDHNM CAADKEVFSS FAHAQVSITN 201 250 ENSTTRP00000014170/1-916 XXXXXXXXXX XXXXXXXXYC GTFCYPNVSQ SPYLRTVGEK LLPGIEVLWT bmy_12657T0/1-684 EIYQYLGEPE TFLFCPTEYC GTFCYPNVSQ SPYLRTVGEK LLPGIEVLWT BACU012379/1-916 EIYQYLGEPE TFLFCPTEYC GTFCYPNVSQ SPYLRTVGEK LLPGIEVLWT ENSBTAP00000021734/1-916 EIYQYLGEPE TFLFCPTEYC GTFCYPNVSQ SPYLRTVGEK LLPGIEVLWT ENSP00000354850/1-916 EIYQYLGEPE TFLFCPTEYC GTFCYPNVSQ SPYLRTVGEK LLPGIEVLWT 251 300 ENSTTRP00000014170/1-916 GPKVVSKEIP VESIEEVSKI IKRAPVIWDN IHANDYDQKR LFLGPYKGRS bmy_12657T0/1-684 GPKVVSKEIP VESIEEVSKI IKRAPVIWDN IHANDYDQKR LFLGPYKGRS BACU012379/1-916 GPKVVSKEIP VESIEEVSKI IKRAPVIWDN IHANDYDQKR LFLGPYKGRS ENSBTAP00000021734/1-916 GPKVVSKEIP VESIEEVSKI IKRAPVIWDN IHANDYDQKR LFLGPYKGRS ENSP00000354850/1-916 GPKVVSKEIP VESIEEVSKI IKRAPVIWDN IHANDYDQKR LFLGPYKGRS 301 350 ENSTTRP00000014170/1-916 TELIPRLKGV LTNPNCEFEA NYVAIHTLAT WYKSNMNGVR KDVVMTDSED bmy_12657T0/1-684 TELIPRLKGV LTNPNCEFEA NYVAIHTLAT WYKSNMNGVR KDVVMTDSED BACU012379/1-916 TELIPRLKGV LTNPNCEFEA NYVAIHTLAT WYKSNMNGVR KDVVMTDSED ENSBTAP00000021734/1-916 TELIPRLKGV LTNPNCEFEA NYVAIHTLAT WYKSNMNGVR KDVVMTDSED ENSP00000354850/1-916 TELIPRLKGV LTNPNCEFEA NYVAIHTLAT WYKSNMNGVR KDVVMTDSED 351 400 ENSTTRP00000014170/1-916 STVSIQIKLE NEGSDEDIET DVLYSPQMAL KLALTEWLQE FGVPHQYSSR bmy_12657T0/1-684 STVSIQIKLE NEGSDEDIET DVLYSPQMAL KLALTEWLQE FGVPHQYSSR BACU012379/1-916 STVSIQIKLE NEGSDEDIET DVLYSPQMAL KLALTEWLQE FGVPHQYSSR ENSBTAP00000021734/1-916 STVSIQIKLE NEGSDEDIET DVLYSPQMAL KLALTEWLQE FGVPHQYSSR ENSP00000354850/1-916 STVSIQIKLE NEGSDEDIET DVLYSPQMAL KLALTEWLQE FGVPHQYSSR 401 450 ENSTTRP00000014170/1-916 QVAHSGAKAN VVDGTPLVAA PSLNATTVVT TVYQEPIMSQ GAALSGEPTA bmy_12657T0/1-684 QVAHSGAKAN VVDGTPLVAA PSLNATTVVT TVYQEPIMSQ GAALSGEPTA BACU012379/1-916 QVAHSGAKAN VVDGTPLVAA PSLNATTVVT TVYQEPIMSQ GAALSGEPTA ENSBTAP00000021734/1-916 QVAHSGAKAS VVDGAPLVAA PSLNATTVVT TVYQEPIMSQ GAALSGEPTA ENSP00000354850/1-916 QVAHSGAKAS VVDGTPLVAA PSLNATTVVT TVYQEPIMSQ GAALSGEPTT 451 500 ENSTTRP00000014170/1-916 LTKEEEKKQP DEEPMDMVVE KQEETDHKND NQILTEIVEA KMAEELKPMD bmy_12657T0/1-684 LTKEEEKKQP DEEPMDMVVE KQEETDHKND NQILTEIVEA KMAEELKPMD BACU012379/1-916 MTKEEEKKQP DEEPMDMVVE KQEETDHKND NQILTEIVEA KMAEELKPMD ENSBTAP00000021734/1-916 LAKDEEKKQP DEEPMDMVVE KQEETDHKND NQILTEIVEA KMAEELKPMD ENSP00000354850/1-916 LTKEEEKKQP DEEPMDMVVE KQEETDHKND NQILSEIVEA KMAEELKPMD 501 550 ENSTTRP00000014170/1-916 TDKESIAESK SPEMSMQEDC ISDIAPMQTD EQTNKEQFVP GPNEKPLYTA bmy_12657T0/1-684 TDKESIAESK SPEMSMQEDC ISDIAPMQTD EQTNKEQFVP GPNEKPLYTA BACU012379/1-916 TDKESIAESK SPEMSMQEDC ISDIAPMQTD EQTNKEQFVP GPNEKPLYTA ENSBTAP00000021734/1-916 TDKESIAESK SPEMSMQEDC ISDIAPMQTD EQTNKEQFVP GPNEKPLYTA ENSP00000354850/1-916 TDKESIAESK SPEMSMQEDC ISDIAPMQTD EQTNKEQFVP GPNEKPLYTA 551 600 ENSTTRP00000014170/1-916 EPVTLEDLQL LADLFYLPYE HGPKGAQMLR EFQWLRANSS VVSVNCKGKD bmy_12657T0/1-684 EPVTLEDLQL LADLFYLPYE HGPKGAQMLR EFQWLRANSS VVSVNCKGKD BACU012379/1-916 EPVTLEDLQL LADLFYLPYE HGPKGAQMLR EFQWLRANSS VVSVNCKGKD ENSBTAP00000021734/1-916 EPVTLEDLQL LADLFYLPYE HGPKGAQMLR EFQWLRANSS VVSVNCKGKD ENSP00000354850/1-916 EPVTLEDLQL LADLFYLPYE HGPKGAQMLR EFQWLRANSS VVSVNCKGKD 601 650 ENSTTRP00000014170/1-916 SEKXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_12657T0/1-684 SEKIEEWRSR AAKFEEMCGL VMGMFTRLSN CANRTILYDM YSYVWDIKSI BACU012379/1-916 SEKIEEWRSR AAKFEEMCGL VMGMFTRLSN CANRTILYDM YSYVWDIKSI ENSBTAP00000021734/1-916 SEKIEEWRSR AAKFEEMCGL VMGMFTRLSN CANRTILYDM YSYVWDIKSI ENSP00000354850/1-916 SEKIEEWRSR AAKFEEMCGL VMGMFTRLSN CANRTILYDM YSYVWDIKSI 651 700 ENSTTRP00000014170/1-916 XXXXXXXXXX XXCRSHSSAQ FLIGDQEPWA FRGGLAGEFQ RLLPIDGAND bmy_12657T0/1-684 MSMVKSFVQW LDGRILSTSS TTIG----WT ---------- ---------- BACU012379/1-916 MSMVKSFVQW LGCRSHSSAQ FLIGDQEPWA FRGGLAGEFQ RLLPIDGAND ENSBTAP00000021734/1-916 MSMVKSFVQW LGCRSHSSAQ FLIGDQEPWA FRGGLAGEFQ RLLPIDGAND ENSP00000354850/1-916 MSMVKSFVQW LGCRSHSSAQ FLIGDQEPWA FRGGLAGEFQ RLLPIDGAND 701 750 ENSTTRP00000014170/1-916 LFFQPPPLTP TSKVYTIRPY FPKDEASVYK ICREMYDDGV GLPFQSQPDL bmy_12657T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU012379/1-916 LFFQPPPLTP TSKVYTIRPY FPKDEASVYK ICREMYDDGV GLPFQSQPDL ENSBTAP00000021734/1-916 LFFQPPPLTP TSKVYTIRPY FPKDEASVYK ICREMYDDGV GLPFQSQPDL ENSP00000354850/1-916 LFFQPPPLTP TSKVYTIRPY FPKDEASVYK ICREMYDDGV GLPFQSQPDL 751 800 ENSTTRP00000014170/1-916 IGDKLVGGLL SLSLDYCFVL EDEDGICGYA LGTVDVTPFI KKCKISWIPF bmy_12657T0/1-684 ---------- ---------- ---------- ---------- ---------- BACU012379/1-916 IGDKLVGGLL SLSLDYCFVL EDEDGICGYA LGTVDVTPFI KKCKISWIPF ENSBTAP00000021734/1-916 IGDKLVGGLL SLSLDYCFVL EDEDGICGYA LGTVDVTPFI KKCKISWIPF ENSP00000354850/1-916 IGDKLVGGLL SLSLDYCFVL EDEDGICGYA LGTVDVTPFI KKCKISWIPF 801 850 ENSTTRP00000014170/1-916 MQEKYTKPNG DKELSEAEKI MLSFHEEQEV LPETFLANFP SLIKMDIHKK bmy_12657T0/1-684 ---------- ---------- ---------- ---------- ---AADVHSA BACU012379/1-916 MQEKYTKPNG DKELSEAEKI MLSFHEEQEV LPETFLANFP SLIKMDIHKK ENSBTAP00000021734/1-916 MQEKYTKPNG DKELSEAEKI MLSFHEEQEV LPETFLANFP SLIKMDIHKK ENSP00000354850/1-916 MQEKYTKPNG DKELSEAEKI MLSFHEEQEV LPETFLANFP SLIKMDIHKK 851 900 ENSTTRP00000014170/1-916 VTDPSVAKSM MACLLSSLKA NGSRGAFCEV RPDDKRILEF YSKLGCFEIA bmy_12657T0/1-684 S--------- ---------- ---------- ---------- ---------- BACU012379/1-916 VTDPSVAKSM MACLLSSLKA NGSRGAFCEV RPDDKRILEF YSKLGCFEIA ENSBTAP00000021734/1-916 VTDPSVAKSM MACLLSSLKA NGSRGAFCEV RPDDKRILEF YSKLGCFEIA ENSP00000354850/1-916 VTDPSVAKSM MACLLSSLKA NGSRGAFCEV RPDDKRILEF YSKLGCFEIA 901 950 ENSTTRP00000014170/1-916 KMEGFPKDVV ILGRSL bmy_12657T0/1-684 ---------- ------ BACU012379/1-916 KMEGFPKDVV ILGRSL ENSBTAP00000021734/1-916 KMEGFPKDVV ILGRSL ENSP00000354850/1-916 KMEGFPKDVV ILGRSL