KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:15 2014 Check: 00 .. Name: ENSTTRP00000009432/1-699 Len: 699 Check: 6100 Weight: 1.00 Name: ENSP00000348455/1-699 Len: 699 Check: 8813 Weight: 1.00 Name: bmy_01308T0/1-369 Len: 699 Check: 8635 Weight: 1.00 Name: ENSBTAP00000021758/1-699 Len: 699 Check: 2445 Weight: 1.00 // 1 50 ENSTTRP00000009432/1-699 MSASASVGGP VPPPPPGPAA ALPPGSAARA LHVELPSQQR RLRHLRNIAA ENSP00000348455/1-699 MSASASVGGP VPQPPPGPAA ALPPGSAARA LHVELPSQQR RLRHLRNIAA bmy_01308T0/1-369 ---------- ---------- ---------- ---------- RLRHLRNIAA ENSBTAP00000021758/1-699 MNASASVGGP LPPPPTGPAA ALPPGSAARA LHVELPSQQR RLRHLRNIAA 51 100 ENSTTRP00000009432/1-699 RNIVNRNGHQ LLDTYFTLHL CNTEKVYKEF YRSEVIKNSL NPTWRSLDFG ENSP00000348455/1-699 RNIVNRNGHQ LLDTYFTLHL CSTEKIYKEF YRSEVIKNSL NPTWRSLDFG bmy_01308T0/1-369 RNIVNRNDHQ LLDTYFTLHL CNTEKVYKEF YRSEVIKNSL NPTWRSLDFG ENSBTAP00000021758/1-699 RNIVNRNGHQ LLDTYFTLHL CNTEKVYKEF YRSEVIKNSL NPTWRSLDFG 101 150 ENSTTRP00000009432/1-699 IMPDRLDTSV SCFVVKIWGG KEDIYQLLIE WKVCLDGLKY LGQQXXXXXX ENSP00000348455/1-699 IMPDRLDTSV SCFVVKIWGG KENIYQLLIE WKVCLDGLKY LGQQIHARNQ bmy_01308T0/1-369 IMPDRLDTSV SCFVVKIWGG KEDIYQLLIE WKVCLDGLKY LGQQIHARNQ ENSBTAP00000021758/1-699 IMPDRLDTSV SCFVVKIWGG KEDVYQLLIE WKVCLDGLKY LGQQIHARNQ 151 200 ENSTTRP00000009432/1-699 XXXXXXXXXX XXXXXXXXXG YSDAQKSILL QVDQNCVRNS YDVFSLLRLH ENSP00000348455/1-699 NEIIFGLNDG YYGAPFEHKG YSNAQKTILL QVDQNCVRNS YDVFSLLRLH bmy_01308T0/1-369 NEIIFGLNDG YYGAPFEHKG YSNAQKSILL QVDQNCVRNS YDVFSLLRLH ENSBTAP00000021758/1-699 NEIIFGLNDG YYGAPFEHKG YSNAQKNILL QVDQNCVRNS YDVFSLLRLH 201 250 ENSTTRP00000009432/1-699 RAQCAIKQTQ VTVQKIGKEI EEKLRLTSTS NELKKESECL QLKILVLRNE ENSP00000348455/1-699 RAQCAIKQTQ VTVQKIGKEI EEKLRLTSTS NELKKKSECL QLKILVLQNE bmy_01308T0/1-369 RAQCAIKQTQ VTVQKIGKEI EEKLRLTSTS NELKKESECL QLKILVLRNE ENSBTAP00000021758/1-699 RAQCAIKQTQ VTVQKIGKEI EEKLRLTSTS NGLKKESECL QLKILVLRNE 251 300 ENSTTRP00000009432/1-699 LERQKKALGR EVALLHKEQI ALQDKGSAFS AEHLKLQLQK ESLNELRKEC ENSP00000348455/1-699 LERQKKALGR EVALLHKQQI ALQDKGSAFS AEHLKLQLQK ESLNELRKEC bmy_01308T0/1-369 LERQKKALGR EVALLHKEQI ALQDKGSAFS AEHLKLQLQK ESLNELRKEC ENSBTAP00000021758/1-699 LERQKKALGR EVVLLHKEQI ALQDKGSTFS AEHLKLQLQK ESLNELRKEC 301 350 ENSTTRP00000009432/1-699 TAKRELFLKT NAQLTIRCRQ LLSELSYIYP IDLNEHKDYF VCGVKLPNSE ENSP00000348455/1-699 TAKRELFLKT NAQLTIRCRQ LLSELSYIYP IDLNEHKDYF VCGVKLPNSE bmy_01308T0/1-369 TAKRELFLKT NAQLTIRCRQ LLSELSYIYP IDLNEHKDYF VCGVKLPNSE ENSBTAP00000021758/1-699 TAKRELFLKT NAQLTIRCRQ LLSELSYIYP IDLNEHKDYF VCGVKLPNSE 351 400 ENSTTRP00000009432/1-699 DFQAKDDGSI AVALGYTAHL VSMISFFLQV PLRYPIIHKG SRSTIKDNIN ENSP00000348455/1-699 DFQAKDDGSI AVALGYTAHL VSMISFFLQV PLRYPIIHKG SRSTIKDNIN bmy_01308T0/1-369 DFQARDDGSI AVALGYTAHL VSMISFFLQV PLRYPIIHKG SRSTIKDNIN ENSBTAP00000021758/1-699 DFQAKDDGSI AVALGYTAHL VSMISFFLQV PLRYPVIHKG SRSTIKDNIN 401 450 ENSTTRP00000009432/1-699 DKLTEKEREF PLYPKGGEKL QFDYGVYLLN KNIAQLRYQH GLGTPDLRQT ENSP00000348455/1-699 DKLTEKEREF PLYPKGGEKL QFDYGVYLLN KNIAQLRYQH GLGTPDLRQT bmy_01308T0/1-369 DKLTEKERE- ---------- ---------- ---------- ---------- ENSBTAP00000021758/1-699 DKLTEKEREF PLYPKGGEKL QFDYGVYLLN KNIAQLRYQH GLGTPDLRQT 451 500 ENSTTRP00000009432/1-699 LPNLKNFMEH GLMVRCDRHH TSSAIPVPKR QSSVFGGVDV GFSGGMPSPD ENSP00000348455/1-699 LPNLKNFMEH GLMVRCDRHH TSSAIPVPKR QSSIFGGADV GFSGGIPSPD bmy_01308T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021758/1-699 LPNLKNFMEH GLMVRCDRHH TSSAIPVPKR QSSIFGGADV GFSGGIPSPD 501 550 ENSTTRP00000009432/1-699 KGHRKRASSE NERLQYKTPP PSYSSALAQP VTTVPSTGES ERKTTSLSSS ENSP00000348455/1-699 KGHRKRASSE NERLQYKTPP PSYNSALAQP VTTVPSMGET ERKITSLSSS bmy_01308T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021758/1-699 KGYRKRASSE NERLQYKTPP PSYNSALVQP VTPVPSTGES DRKTASLSSS 551 600 ENSTTRP00000009432/1-699 LDTSLDFSKE NKKKGVDLSD SFSGGHGSVN TSQEQGQALP GPPATVNGTL ENSP00000348455/1-699 LDTSLDFSKE NKKKGEDLVG SLNGGHANVH PSQEQGEALS GHRATVNGTL bmy_01308T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021758/1-699 LDTSLDLSKE NKKKGVDLGD SLNGSHVSVN TSQEQGQALS GPPATINGTL 601 650 ENSTTRP00000009432/1-699 LPSEQAGSSS AQLPGGFHPV SEAELCCTVE QAEEIIGMEA TGFTSGDQLE ENSP00000348455/1-699 LPSEQAGSAS VQLPGEFHPV SEAELCCTVE QAEEIIGLEA TGFASGDQLE bmy_01308T0/1-369 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021758/1-699 LPGEQASSSG AQLPGSFHPV SEAELCCTVE QAEEIIGMEA TGFTSGDQLE 651 700 ENSTTRP00000009432/1-699 AFNCIPVDSA VAVECDEQVL GEFEEFSRRI YALNENVSSF RRPRRSSDK ENSP00000348455/1-699 AFNCIPVDSA VAVECDEQVL GEFEEFSRRI YALNENVSSF RRPRRSSDK bmy_01308T0/1-369 ---------- ---------- ---------- ---------- --------- ENSBTAP00000021758/1-699 AFNCIPVDSA VAVECDEQVL GEFEEFSRRI YALNENVSSF RRPRRSSDK