KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:16 2014 Check: 00 .. Name: ENSP00000309741/1-724 Len: 727 Check: 7340 Weight: 1.00 Name: ENSBTAP00000021761/1-716 Len: 727 Check: 4992 Weight: 1.00 Name: ENSTTRP00000012916/1-605 Len: 727 Check: 8422 Weight: 1.00 Name: BACU014806/1-383 Len: 727 Check: 8093 Weight: 1.00 Name: bmy_19510T0/1-511 Len: 727 Check: 9462 Weight: 1.00 // 1 50 ENSP00000309741/1-724 MKSAKGIENL AFVPSSPDIL RRLSASPSQI EVSALSSDPQ RENSQPQELQ ENSBTAP00000021761/1-716 MKSCKGIENP AFVSSSPDTP RRVCASSPSI DISVLPT--- -----PAA-- ENSTTRP00000012916/1-605 ---------- ---------- ---------- ---------- ---------- BACU014806/1-383 MKGCKGIENP AFVASSPYSP RRLCPSSSSV EVSVSSTNPL REGSPPQE-- bmy_19510T0/1-511 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000309741/1-724 KPQEPQKSPE PSLPSAPPNV SEEKLRSLSL SEFEEGSYGW RNFHPQCLQR ENSBTAP00000021761/1-716 -GSPPPPAPQ EPLEPPQLSG VPGASELESL SEYEEGPCGW GSFQPRALQR ENSTTRP00000012916/1-605 ---------- ---------- ---------- ---------- ---------- BACU014806/1-383 -PQEPQKSPE PPLSSVTPPG SQERSGPESL SEYEEGPCGW GNFQPQCLQC bmy_19510T0/1-511 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000309741/1-724 CNTPGGFLLH YCLLAVTQGI VVNGLVNISI STVEKRYEMK SSLTGLISSS ENSBTAP00000021761/1-716 CNTPGGFLFH YCLLALTQGI VVNGLVNISI STIEKRYELQ SSLTGLISSS ENSTTRP00000012916/1-605 ---------- ---------M VVNGLVNISI STIEKRYELK SSLTGLISSS BACU014806/1-383 CNTPQGFLFH YCLLALTQGM VVNGLVNISI STIEKRYELK SSLTGLISSS bmy_19510T0/1-511 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000309741/1-724 YDISFCLLSL FVSFFGERGH KPRWLAFAAF MIGLGALVFS LPQFFSGEYK ENSBTAP00000021761/1-716 YDIAFCLLSL FVSFIGERGH KPRWLAFASF MLGLGALVFS LPKFFSGKYQ ENSTTRP00000012916/1-605 YDIAFCLLSL FVSFIGERGH KPRWLAFASF MIGLGALVYS LPKFFSGKYQ BACU014806/1-383 YDIAFCLLSL FVSFIGERGH QPRWLAFASF MIGLGALVYS LPKFFSGKYQ bmy_19510T0/1-511 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000309741/1-724 LGSLFEDTCV TTRNSTSCTS STSSLSNYLY VFILGQLLLG AGGTPLYTLG ENSBTAP00000021761/1-716 FGSLYEDTCL TAKNKGSCST SSSPLFYYLY VFILGQLFLG TGGTPLYTLG ENSTTRP00000012916/1-605 FGSLFEDTCL TAKNKTTCTA SSSSLFYYLY VFILGQLLLG TGGTPLYTLG BACU014806/1-383 FGSLFEDTCL TAKNKTSCTA SSSSLFYYLY VFILGQLLLG TGGTPLYTLG bmy_19510T0/1-511 -------TCL TAKNKTSCTA SSSSLFYYLY VFILGQLLLG TGGTPLYTLG 251 300 ENSP00000309741/1-724 TAFLDDSVPT HKSSLYIGTG YAMSILGPAI GYVLGGQLLT IYIDVAMGES ENSBTAP00000021761/1-716 TAFIDDSVPI HKSSLYIGIG YAMSILGPAV GYVLGGQLLT LYIDVDLKHS ENSTTRP00000012916/1-605 TAFIDDSVPT HKSSLYIGIG YYMSILG-AV GYVLGGQLLT VYIDADLGQS BACU014806/1-383 TAFIDDSVPT HKSSLYIGIG YSMSILGPAV GYVLGGQLLA MYIDVDLGQS bmy_19510T0/1-511 TAFIDDSVPT HKSSLYIGIG YSMSILGPAL GYVLGGQLLA F--------- 301 350 ENSP00000309741/1-724 TDVTEDDPRW LGAWWIGFLL SWIFAWSLII PFSCFPKHLP GTAEIQAGKT ENSBTAP00000021761/1-716 IDITEDDPRW LGAWWIGFLI SWLLAWSLII PFSCFPKHLP GTAKIQEGKV ENSTTRP00000012916/1-605 IDITEDDPRW LGAWWIGFLM SWLFAWSLII PFSCFPKHLP GTAEIQDGKT BACU014806/1-383 IDIAEDDPRW LGAWWIGFLM SWIFAWSLII PFSCFPKHLP GTAEIQDGKT bmy_19510T0/1-511 IDITEDDPRW LGAWWIGFLM SWIFAWSLII PFSCFPKHLP GTAEIQDGKT 351 400 ENSP00000309741/1-724 SQAHQSNS-- NADVKFGKSI KDFPAALKNL MKNAVFMCLV LSTSSEALIT ENSBTAP00000021761/1-716 SQTHQSASLQ ATDGNFGQSF KDFPAALKNL MRNTVFMCLV LSTCSEALIT ENSTTRP00000012916/1-605 SQIHQSNS-- NIEMGIGQSF KDFPAALKNL MRNTVFMCLV LSTCSEALVT BACU014806/1-383 SQIHQSNSLQ HTDGNFGQSF KDFPAALK-- ---------- ---------- bmy_19510T0/1-511 SQIHQSNSLQ HTDGNFGQSF KDFPAALKNL MRNTVFMCLV LSTCSEALVT 401 450 ENSP00000309741/1-724 TGFATFLPKF IENQFGLTSS FAATLGGAVL IPGAALGQIL GGFLVSKFRM ENSBTAP00000021761/1-716 TGFATFLPKF IENQFGLSSS SAATLAGTVL IPGAALGQIL GGVLVSKFKM ENSTTRP00000012916/1-605 TGFATFLPKF IENQFGLSSS SAATLAGTVL IPGAALGQIL GGILVSKFKM BACU014806/1-383 ---------- ---------- ---------- ---------- ---------- bmy_19510T0/1-511 TGFATFLPKF IENQFGLSSS SAATLAGTVL IPGAALGQIL GGILVSKFKM 451 500 ENSP00000309741/1-724 TCKNTMKFAL FTSGVALTLS FVFMYAKCEN EPFAGVSESY NGTGELGNLI ENSBTAP00000021761/1-716 MCKNIMKFAL LTSVISLVLT FVFAYANCEN EPFAGVSESY NGTGELGNLT ENSTTRP00000012916/1-605 PCKNIMKFAL LMSITALTLT FVFVYANCEN EPFAGVSESY NGTGKLGNLI BACU014806/1-383 ---------- ---------- ---------- ---------- ---------- bmy_19510T0/1-511 TCKNIMKFAL LTSITALALT FVFVYANCEN EPFAGVSESY NGTGELGNLT 501 550 ENSP00000309741/1-724 APCNANCNCS RSYYYPVCG- DGVQYFSPCF AGCSNPVAHR KPKVYYNCSC ENSBTAP00000021761/1-716 APCNAHCNCL RSYYYPVCGG NGVQYFSPCY AGCTQSVSKI HPKVYYNCSC ENSTTRP00000012916/1-605 APCNANCNCL RSYYYPICGG NGIQYFSPCY AGCTNSVSKR HPKVYYNCSC BACU014806/1-383 ---------- ---FYQLAQ- ---------- ---------- ---------- bmy_19510T0/1-511 APCNANCNCL RSYYYPICGG NGIQYFSPCY AGCTNSVSKR HPKVYYNCSC 551 600 ENSP00000309741/1-724 IERKTEITST AETFGFEAKA GKCETHCAKL PIFLCIFFIV IIFTFMAGTP ENSBTAP00000021761/1-716 IEGEIHITPT PSSVSLEAQA GKCSSQCKNL PPFLGVFFAA IVFTFMAGTP ENSTTRP00000012916/1-605 IERKTEVTPT PSSFSFEAQA GKCSSQCKNL PVFLGIFFAA IVFTFMAGTP BACU014806/1-383 ---------- ---------- ---------- ---------- ---------- bmy_19510T0/1-511 IERKTEVTPT PSSFSFEAQA GKCSSQCKNL PVFLGIFFAA IVFTFMAGTP 601 650 ENSP00000309741/1-724 ITVSILRCVN HRQRSLALGI QFMVLRLLGT IPGPIIFGFT IDSTCILWDI ENSBTAP00000021761/1-716 ITVSILRCVN QRQRSLALGI QCTLLRLLGT IPGPIIFGST IDSTCILWDI ENSTTRP00000012916/1-605 XXXXXXXCVD QKQRSLALGI QCVLLRLLGT IPGPIIFGIT IDSTCILWDV BACU014806/1-383 ---------- ---------- ---------- ---------- ---------- bmy_19510T0/1-511 ITVSILRCVN QKQRSLALGI QCMLLRLLGT IPGPIIFGIT IDSTCILWDI 651 700 ENSP00000309741/1-724 NDCGIKGACW IYDNIKMAHM LVAISVTCKV ITMFFNGFAI FLYKPPPSAT ENSBTAP00000021761/1-716 NECGNKGACW IYNNVRMAYM LVAISVICKI ITVFFNGLAV FLYKPPPSVT ENSTTRP00000012916/1-605 NECGIKGACW IYNNIKMAYM LVAIXXXXXX XXXXXXXXXX XXXXXXXXXX BACU014806/1-383 ---------- ---------- ---------- ---------- ---KP----- bmy_19510T0/1-511 NECGIKGACW IYNNIKMAYM LVAISVTCKI ITVFFNGLAV FLYKPPPLGT 701 750 ENSP00000309741/1-724 DVSFHKENAV VTNVLAEQDL NKIVKEG ENSBTAP00000021761/1-716 DVAFQNQNAV LTAVSLECDL NKAGNDG ENSTTRP00000012916/1-605 XXXXXXXXXX XXXXXXXXXX SKAGNDG BACU014806/1-383 ---------- ---------- ------- bmy_19510T0/1-511 DVPFQNQNSV VTTVSLECDL SKAGHDG