KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:17 2014 Check: 00 .. Name: ENSP00000260645/1-651 Len: 652 Check: 4360 Weight: 1.00 Name: ENSBTAP00000021768/1-649 Len: 652 Check: 1427 Weight: 1.00 Name: BACU013911/1-576 Len: 652 Check: 5269 Weight: 1.00 Name: bmy_00342T0/1-480 Len: 652 Check: 2868 Weight: 1.00 Name: ENSTTRP00000006053/1-652 Len: 652 Check: 5455 Weight: 1.00 // 1 50 ENSP00000260645/1-651 MGDLSSLTPG GSMGLQVNRG SQSSLEGAPA TAPEP-HSLG ILHASYSVSH ENSBTAP00000021768/1-649 MGELPFLTLG ESSELQVNRS SQCSLEEVPA ---KPRHSLG IFHASYSVSH BACU013911/1-576 MSELRFLTPA GSSGLQVNRS SPCSLEEAPA AASKPRHSLG VLHASYSVSH bmy_00342T0/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006053/1-652 MSELHFLTPA GSSELQVNRS SQCSLEEVPA AASKPRHSLG ILHASYSVSQ 51 100 ENSP00000260645/1-651 RVRPWWDITS CRQQWTRQIL KDVSLYVESG QIMCILGSSG SGKTTLLDAM ENSBTAP00000021768/1-649 HVGPWWDIAS RRQKWTRQIL KDVSLYVESG QIMCILGSSG SGKTTLLDAM BACU013911/1-576 CAGPWWDIAS RRQKWTRQIL KDVSLYVESG QIMCILGSSG SGKTTLLDAM bmy_00342T0/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006053/1-652 CVGPWWDIAS RRQKWTRQIL KDVSLYVESG QIMCILGSSG SGKTTLLDAM 101 150 ENSP00000260645/1-651 SGRLGRAGTF LGEVYVNGRA LRREQFQDCF SYVLQSDTLL SSLTVRETLH ENSBTAP00000021768/1-649 SGRLRRTGTL LGEVFVNGQE LHREQFQDCF SYVLQSDTLL SNLTVRETLN BACU013911/1-576 SGRLRRTGTL LGDVFVNGRA LRREQFQDCF SYVLQSDTLL SSLTVRETLC bmy_00342T0/1-480 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006053/1-652 SGRLRRTGTL LGDVFVNGRA LRREQFQDCF SYLLQSDTLL SSLTVRETLC 151 200 ENSP00000260645/1-651 YTALLAIRRG NPGSFQKKVE AVMAELSLSH VADRLIGNYS LGGISTGERR ENSBTAP00000021768/1-649 YTALLAIRRG SQSFFQKKVE AVMTELSLSH VADQLIGNYS FGGISHGERR BACU013911/1-576 YTALLAVRGG SQGFFQKKVE AVMAELSLSH VADRLIGNYS FGGISHGERR bmy_00342T0/1-480 ---------- ---------- --MAELSLSH VADRLIGNYN FGGISHGERR ENSTTRP00000006053/1-652 YTALLAIRGG SQGFFQKKVE AVMAELSLSH VADRLIGNYN FGGISHGERR 201 250 ENSP00000260645/1-651 RVSIAAQLLQ DPKVMLFDEP TTGLDCMTAN QIVVLLVELA RRNRIVVLTI ENSBTAP00000021768/1-649 RVSIAAQLLQ DPKVMLFDEP TTGLDCMTAN QIVVLLAELA RRDRIVILTI BACU013911/1-576 RVSIAAQLLQ DPKVMLFDEP TTGLDCMTAN QIVVLIAELA RRDRIVIVTI bmy_00342T0/1-480 RVSIAAQLLQ DPKVMLFDEP TTGLDCMTAN QIVVLIAELA RRDRIVIVTI ENSTTRP00000006053/1-652 RVSIAAQLLQ DPKVMLFDEP TTGLDCVTAN QIVVLIAELA RRGRIMILTI 251 300 ENSP00000260645/1-651 HQPRSELFQL FDKIAILSFG ELIFCGTPAE MLDFFNDCGY PCPEHSNPFD ENSBTAP00000021768/1-649 HQPRSELFQL FDKIAILSCG ELVFCGTPVE MLDFFSGCGY PCPEHSNPFD BACU013911/1-576 HQPRSELFQL FDKIAILSCG ELVFCGTPVE MLDFFSGCSY PCPEHSNPFD bmy_00342T0/1-480 HQPRSELFQL FDKIAILSCG ELVFCGTPVE MLDFFSGCSY PCPEHSNPFD ENSTTRP00000006053/1-652 HQPRSELFQL FDKIAILSCG ELVFCGTPVE MLHFFSGCGY PCPEHSNPFD 301 350 ENSP00000260645/1-651 FYMDLTSVDT QSKEREIETS KRVQMIESAY KKSAICHKTL KNIERMKHLK ENSBTAP00000021768/1-649 FYMDLTSVDT QSKEREIETY RRVQMIEVAY RESAMYHKTM EAIERTKHLK BACU013911/1-576 FYMDLTSVDT QNKEREIETY KRVQMIESAY KESAMYRKTL EDIERTKHLK bmy_00342T0/1-480 FYMDLTSVDT QNKEREIETY KRVQMIESAY XESAMYRKTL EDIERTKHLK ENSTTRP00000006053/1-652 FYVDLTSVDT QNKEREIETY KRVQMIESAY KESAMYRKTL EDIGRTKHLK 351 400 ENSP00000260645/1-651 TLPMVPFKTK DSPGVFSKLG VLLRRVTRNL VRNKLAVITR LLQNLIMGLF ENSBTAP00000021768/1-649 TLPKIPFKTR DSPGALSKLC VLLRRVMRNL LRNKLAVTMR LTQNLIMGLF BACU013911/1-576 TLPVIPFKTK DSPGALSKLC VLLRRVTRNL MRNKLAVAMR LTQNLIMGLF bmy_00342T0/1-480 TLPVIPFKTK DSPGALSKLC VLLRRVTRNL MRNKLAVTMR LTQNLIVGLF ENSTTRP00000006053/1-652 TLPVIPFKTK DSPGALSKLC VLLRRVTRNL MRNKLAVTMR LTQNLIVGLF 401 450 ENSP00000260645/1-651 LLFFVLRVRS NVLKGAIQDR VGLLYQFVGA TPYTGMLNAV NLFPVLRAVS ENSBTAP00000021768/1-649 IIFFLLRLGK DVLKGAVQDR VGLLYQFVGA MPYTGMLNAV TLFPVLRAVS BACU013911/1-576 IVFFLLRVQN DVLKGAIQDR VGLLYQFVGA SPYTGMLNAV NLFPVLRAIS bmy_00342T0/1-480 IVFFLLRVQN DVLKGAIQDR VGLLYQFVGA IPYTGMLNAV NLFPVLRAVS ENSTTRP00000006053/1-652 IVFFLLRVQN DVLKGAIQDR VGLLYQFVGA VPYTGMLNAV NLFPVLRAVS 451 500 ENSP00000260645/1-651 DQESQDGLYQ KWQMMLAYAL HVLPFSVVAT MIFSSVCYWT LGLHPEVARF ENSBTAP00000021768/1-649 DQESQDGLYH KWQMLLAYML HVLPFSVTAT LVCCSVCYWT LALYPEAARF BACU013911/1-576 DQESEDGLYQ KWQMLLAYVL HVLPFSVIAT MIFCSVCYWT LALYPEAARF bmy_00342T0/1-480 DQESEDGLYQ KWQMLLAYVL HVLPFSVIAT MIFCSVCYWT LALYPEAARF ENSTTRP00000006053/1-652 DQESEDGLYQ KWQMLLAYVL HVLPFSVIAT IIFCSVCYWT LALYPEAARF 501 550 ENSP00000260645/1-651 GYFSAALLAP HLIGEFLTLV LLGIVQNPNI VNSVVALLSI AGVLVGSGFL ENSBTAP00000021768/1-649 AYFSVALLAP HLIGEFLSLV LLGVIQNPNV VNSVVALLSI AGVLMGSGFV BACU013911/1-576 GFFSAAILAP HLIGEFLTLV LLGVVQNPNV VNSMVALLCI AGVLVGSGFL bmy_00342T0/1-480 GFFSAAILAP HLIGEFLTLV LLGVVQNPNV VNSMVALLCI AGVLVGSGFL ENSTTRP00000006053/1-652 GYFSAAILAP HLIGELLTLV LLGVVQNPNV VNSMVALLCI AGVLVGSGFL 551 600 ENSP00000260645/1-651 RNIQEMPIPF KIISYFTFQK YCSEILVVNE FYGLNFTCGS SNVSVTTNPM ENSBTAP00000021768/1-649 RNIQEMPIPF KILGYFTFQK YCSEILVVNE FYGQNFTCGN SNASVSANPM BACU013911/1-576 R--------- ----WSHISK FRS-VVPPSR MYCKD----- ---------- bmy_00342T0/1-480 RNTEEMPLPF KIFSYFTFQK YCSEILVVNE FYGQNFTCGN SNGSMSTNPM ENSTTRP00000006053/1-652 RNTEEMPLPF KIFSYFTFQK YCCEILVVNE FYGQNFTCGN SNGSMSTNPM 601 650 ENSP00000260645/1-651 CAFTQGIQFI EKTCPGATSR FTMNFLILYS FIPALVILGI VVFKIRDHLI ENSBTAP00000021768/1-649 CTITQGAQFI ERNCPGATSR FTANFLILYS FIPALVILGI IVFKIRDYLI BACU013911/1-576 ---------- ---CRDAA-- ---------- ---------- ---------- bmy_00342T0/1-480 CAFSQGIQFI ERTCPGATSR FTANFLILYS FIPVLVILGI IVFKIRDYLI ENSTTRP00000006053/1-652 CAFSQGIQFI ERTCPGATSR FTANFLILYS FIPVLVILGI IVFKIRDYLI 651 700 ENSP00000260645/1-651 SR ENSBTAP00000021768/1-649 SR BACU013911/1-576 -- bmy_00342T0/1-480 SR ENSTTRP00000006053/1-652 SR