KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:17 2014 Check: 00 .. Name: ENSTTRP00000006723/1-110 Len: 241 Check: 4768 Weight: 1.00 Name: ENSP00000409315/1-190 Len: 241 Check: 1907 Weight: 1.00 Name: ENSBTAP00000021769/1-190 Len: 241 Check: 2297 Weight: 1.00 Name: bmy_04591T0/1-205 Len: 241 Check: 3943 Weight: 1.00 Name: BACU019270/1-110 Len: 241 Check: 4164 Weight: 1.00 // 1 50 ENSTTRP00000006723/1-110 ---------- ---------- ---------- ---------- ---------- ENSP00000409315/1-190 MEAETKTLPL ENASILSEGS LQEGHRLWIG NLDPKITEYH LLKLLQKFGK ENSBTAP00000021769/1-190 MEAETKTLPL ENASILSEGS LQEGHRLWIG NLDPKITEYH LLRLLQKFGT bmy_04591T0/1-205 ---------- -----MSRGD YAE------- -----VTRYH LLKLLQRFGT BACU019270/1-110 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006723/1-110 ---------- ---------- ---------- ---------- ---------- ENSP00000409315/1-190 VKQFDFLFHK SGALEGQPRG Y--------- ---------- ---------- ENSBTAP00000021769/1-190 VKQFDFLFHK SGALEGQPRG Y--------- ---------- ---------- bmy_04591T0/1-205 VKQFDFLFHK SGALEGQPRG IQRNKRVTGK TRLECPTLSL GLSLFLFLFL BACU019270/1-110 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006723/1-110 ---------- ---------- ---------- -EAEQAIQCL NGKLALSKKL ENSP00000409315/1-190 ---------- -----CFVN- ------FETK QEAEQAIQCL NGKLALSKKL ENSBTAP00000021769/1-190 ---------- -----CFVN- ------FETK QEAEQAIQCL NGKLALSKKL bmy_04591T0/1-205 KGFFTPSKRG LRLAECLMDT NGAEKAWQDG KEAEQAIQCL NGKLALSKKL BACU019270/1-110 ---------- ---------- ---------- -EAEQAIQCL NGKLALSKKL 151 200 ENSTTRP00000006723/1-110 VVRWAHAQVK RYDHIKNDKV LPNSLEPSSS KEPTQSNISV TAKIKAIEAK ENSP00000409315/1-190 VVRWAHAQVK RYDHNKNDKI LPISLEPSSS TEPTQSNLSV TAKIKAIEAK ENSBTAP00000021769/1-190 VVRWAHAQVK RYDHNKNDKI LPISLEPSSS TEPAQSNLSV TAKIKAIEAK bmy_04591T0/1-205 VVRWAHAQV- --------KV LPISLEPSSS TEPAQSNLSV TAKIKAIEAK BACU019270/1-110 VVRWAHAQVK RYDHNKNDKV LPISLEPSSS TEPAQSNLSV TAKIKAIEAK 201 250 ENSTTRP00000006723/1-110 LKMMAENPDA EYPAAPVYSY FKPPDKKRTT PYSRTAWKSR R ENSP00000409315/1-190 LKMMAENPDA EYPAAPVYSY FKPPDKKRTT PYSRTAWKSR R ENSBTAP00000021769/1-190 LKMMAENPDA EYPAAPVYSY FKPPDKKRTT PYSRTAWKSR R bmy_04591T0/1-205 LKMMAENPDA EYPAAPVYSY FKPPDKKRTT PYSRTAWKSR R BACU019270/1-110 LKMMAENPDA EYPAAPVYSY FKPPDKKRTT PYSRTAWKSR R