KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:18 2014 Check: 00 .. Name: bmy_12544T0/1-209 Len: 213 Check: 7315 Weight: 1.00 Name: ENSP00000355299/1-171 Len: 213 Check: 7648 Weight: 1.00 Name: ENSBTAP00000021771/1-168 Len: 213 Check: 5967 Weight: 1.00 Name: BACU005811/1-171 Len: 213 Check: 311 Weight: 1.00 Name: ENSTTRP00000006962/1-167 Len: 213 Check: 3983 Weight: 1.00 // 1 50 bmy_12544T0/1-209 MEESGESQPT AGCSDVRPSG DRG---GG-A PSWAPEDAWM GTHPKYLEMM ENSP00000355299/1-171 MEERGDSEPT PGCSGLGPGG VRGFGDGGGA PSWAPEDAWM GTHPKYLEMM ENSBTAP00000021771/1-168 MEERGESQPT AGCGDVLPGD DRG---GGSA HPWAPEDAWM GTHPKYLEMM BACU005811/1-171 MEESGESQPT AGCSDVRPSV DRG---GG-A PSWAPEDAWM GTHPKYLEMM ENSTTRP00000006962/1-167 MEESGESQPT AGCSDVRPSG DSG---GG-A LSWAPEDAWM GTHPKYLEMM 51 100 bmy_12544T0/1-209 ELDIGDATQV YIAFLVYLDL MESKSWHEVN CVGLPDLQLI CLLGTEIEGE ENSP00000355299/1-171 ELDIGDATQV YVAFLVYLDL MESKSWHEVN CVGLPELQLI CLVGTEIEGE ENSBTAP00000021771/1-168 ELDIGDATQV YIAFLVYLDL MESKSWHEVN CVGLPDLQLI CLLGTEIEGE BACU005811/1-171 ELDIGDATQV YIAFLVYLDL MENKSWHEVN CVGLPDLQLI CLLGTEIEGE ENSTTRP00000006962/1-167 ELDIGDATQV YIAFLVYLDL MESKSWHEVN CVGLPDLQLI CLLGTEIEGE 101 150 bmy_12544T0/1-209 GLQTVVPTPV SASLSHNRWA GDFDLCLTGL TLLLLLPLVM MMTVIKFFGP ENSP00000355299/1-171 GLQTVVPTPI TASLSHNR-- ---------- ---------- IREILKASRK ENSBTAP00000021771/1-168 GLQTVVPTPI SASLSHNR-- ---------- ---------- IREILKASRK BACU005811/1-171 GLQTVVPTPV SASLSHNR-- ---------- ---------- IREILKASRK ENSTTRP00000006962/1-167 GLQTVVPTPV SASLSHNR-- ---------- ---------- IREILKASRK 151 200 bmy_12544T0/1-209 ILGNPLKSDK PHKNKTTTSY VVGGLHQRVT MTTEHDADAD AVAVQQPSIC ENSP00000355299/1-171 LQGDP---DL P------MSF TLAIVESDST IV--YYKLTD GFMLPDPQ-- ENSBTAP00000021771/1-168 LQGDP---DL P------TSF TLAIVESDST IV--YYKLTD GFMLPDPQ-- BACU005811/1-171 LQGDP---DL P------MSF TLAIVESDST IV--YYKLTD GFMLPDPQVS ENSTTRP00000006962/1-167 LQGDP---DL P------MSF TLAIVESDST IV--YYKLTD GFMLPDPQ-- 201 250 bmy_12544T0/1-209 THDAVGTQNC ESG ENSP00000355299/1-171 -NISLRR--- --- ENSBTAP00000021771/1-168 -NISLRR--- --- BACU005811/1-171 FGATISKH-- --- ENSTTRP00000006962/1-167 -NISLRR--- ---