KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:20 2014 Check: 00 .. Name: ENSP00000267396/1-340 Len: 340 Check: 6355 Weight: 1.00 Name: ENSBTAP00000021784/1-340 Len: 340 Check: 7285 Weight: 1.00 Name: ENSTTRP00000001414/1-313 Len: 340 Check: 3310 Weight: 1.00 Name: bmy_13938T0/1-326 Len: 340 Check: 6645 Weight: 1.00 Name: BACU008636/1-340 Len: 340 Check: 8616 Weight: 1.00 // 1 50 ENSP00000267396/1-340 MHTDLDTDMD MDTETTALCP SGSRRASPPG TPTPEADATL LKKSEKLLAE ENSBTAP00000021784/1-340 MHTDFDTDMD TDTETTALCP SSSHQASPPE TPTPEADATL LKKPEKLLAG ENSTTRP00000001414/1-313 ---------- ---------- -----SYPP- -PTLKADATL LKKPEKLLAG bmy_13938T0/1-326 MHTDLDTDMD TDTETTALCP AGSHRASPPG TPTPEADATL LKKPEKLLAG BACU008636/1-340 MHTDLDTDMD TDTETTALCP AGSHWASPPG TPTPEADATL LKKPEKLLAG 51 100 ENSP00000267396/1-340 LDRSGLPSAP GAPRRRGSMP VPYKHQLRRA QAVDELDWPP QASSSGSSDS ENSBTAP00000021784/1-340 LDRGRPPPAL GAPRRRGSMP VPYKHQLRRA QAVDELDWPP QASSSGSSDS ENSTTRP00000001414/1-313 LDWGGPPPAP GAPRRRGSMP VPYKHQLRRA QAVDELDWPP QASSSGSSDS bmy_13938T0/1-326 LDRGGPPPAP GAPRRRGSMP VPYKHQLRRA QAVDELDWPP QTSSSGSSDS BACU008636/1-340 LDRGGPPPAP GAPRRRGSMP VPYKHQLRRA QAVDELDWPP QTSSSGSSDS 101 150 ENSP00000267396/1-340 LGSGEAAPAQ KDGIFKVMLV GESGVGKSTL AGTFGGLQGD SAHEPENPED ENSBTAP00000021784/1-340 LGSGEAAPTQ KDGIFKVMLV GESGVGKSTL AGTFGGLQGD SAHELENPED ENSTTRP00000001414/1-313 LGSGEAAPTQ KDGIFKVMLV GESGVGKSTL AGTFGGLQGD SAHELENPED bmy_13938T0/1-326 LGSEEAAPTQ KDGIFKVMLV GESGVGKSTL AGTFGGLQGD SAHEPENPED BACU008636/1-340 LGSGEAAPTQ KDGIFKVMLV GESGVGKSTL AGTFGGLQGD SAHEPENPED 151 200 ENSP00000267396/1-340 TYERRIMVDK EEVTLVVYDI WEQGDAGGWL RDHCLQTGDA FLIVFSVTDR ENSBTAP00000021784/1-340 TYERRIMVDK EEVTLVVYDI WEQGDAGGWL RDHCLQTGDA FLIVFSVTDR ENSTTRP00000001414/1-313 TYERRIMVDK EEVTLVVYDI WEQGDAGGWL QDHCLQTGDA FLIVFSVTDR bmy_13938T0/1-326 TYERRIMVDK EEVTLVVYDI WEQVRTKMWL Q--------- -----AVTDR BACU008636/1-340 TYERRIMVDK EEVTLVVYDI WEQGDAGGWL QDHCLQTGDA FLIVFSVTDR 201 250 ENSP00000267396/1-340 RSFSKVPETL LRLRAGRPHH DLPVILVGNK SDLARSREVS LEEGRHLAGT ENSBTAP00000021784/1-340 RSFSKVPETL LRLRAGRPHH DLPVILVGNK SDLARSREVS LEEGRHLAGT ENSTTRP00000001414/1-313 QSFSKVPETL LRLRAGRPQH DLPVILVGNK SDLARSREVS LEEGRHLAGT bmy_13938T0/1-326 QSFSKVPETL LRLRAGRPHH DLPVILVGNK SDLARSREVS LEEGRHLAGT BACU008636/1-340 QSFSKVPETL LRLRAGRPHH DLPVILVGNK SDLARSREVS LEEGRHLAGT 251 300 ENSP00000267396/1-340 LSCKHIETSA ALHHNTRELF EGAVRQIRLR RGRNHAGGQR PDPGSPEGPA ENSBTAP00000021784/1-340 LSCKHIETSA ALHHNTRELF EGAVRQIRLR RGRNGAGGPR PEWGSPEGLA ENSTTRP00000001414/1-313 LSCKHIETSA ALHHNTRELF EGAVRQIRLR RGPNRAGGPQ PEWGRPEGPA bmy_13938T0/1-326 LSCKHIETSA ALHHNTRELF EGAVRQIRLR RGPNRAGGPQ PEWGRPEGPA BACU008636/1-340 LSCKHIETSA ALHHNTRELF EGAVRQIRLR RGPNRAGGPQ PEWGRPEGPA 301 350 ENSP00000267396/1-340 PPARRESLTK KAKRFLANLV PRNAKFFKQR SRSCHDLSVL ENSBTAP00000021784/1-340 PPARRESLTK KAKRFLANLV PRNAKFFKQR SRSCHDLSVL ENSTTRP00000001414/1-313 PPTRRESLTK KAKRFLANLV PRNTKFFKQR SRSCHDLSVL bmy_13938T0/1-326 PPTRRESLTK KAKRFLANLV PRNTKFFKQR SRSCHDLSVL BACU008636/1-340 LPTRRESLTK KAKRFLANLV PRNTKFFKQR SRSCHDLSVL