KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:21 2014 Check: 00 .. Name: ENSTTRP00000003566/1-497 Len: 497 Check: 9748 Weight: 1.00 Name: ENSP00000358451/1-497 Len: 497 Check: 501 Weight: 1.00 Name: ENSBTAP00000021791/1-497 Len: 497 Check: 9184 Weight: 1.00 Name: bmy_11532T0/1-268 Len: 497 Check: 2214 Weight: 1.00 Name: BACU002667/1-497 Len: 497 Check: 1747 Weight: 1.00 // 1 50 ENSTTRP00000003566/1-497 MDPLGAPSQF VDVDTLPSWG NSCEEQLTTS DTAAETYQEE TIRSPFLYNK ENSP00000358451/1-497 MDPLGAPSQF VDVDTLPSWG DSCQDELNSS DTTAEIFQED TVRSPFLYNK ENSBTAP00000021791/1-497 MDPLGAPSQF VDVDTLPSWG NSCEDQLNAS EIAAETYQEE TIRSPFLYNK bmy_11532T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU002667/1-497 MDPLGAPSQF VDVDTLPSWV NSYEEQLTTS DTAAETYQEE TIRSPFLYNK 51 100 ENSTTRP00000003566/1-497 DINGKVVLWK GDVALLNCTA IVNTSNESLT DKNPVSESIF MLAGPDLKED ENSP00000358451/1-497 DVNGKVVLWK GDVALLNCTA IVNTSNESLT DKNPVSESIF MLAGPDLKED ENSBTAP00000021791/1-497 DINGKVVLWK GDVALLNCTA IVNTSNESLT DKNPVSESIF MLAGPDLKED bmy_11532T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU002667/1-497 DINGKVVLWK GDVALLNCTA IVNTSNESLT DKNPVSESIF MLAGPDLKED 101 150 ENSTTRP00000003566/1-497 LQKLRGCRTG EAKLTKGFNL AARFIIHTVG PKYKSRYRTA AESSLYSCYR ENSP00000358451/1-497 LQKLKGCRTG EAKLTKGFNL AARFIIHTVG PKYKSRYRTA AESSLYSCYR ENSBTAP00000021791/1-497 LQKLRGCRTG EAKLTKGFNL AARFIIHTVG PKYKSRYRTA AESSLYSCYR bmy_11532T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU002667/1-497 LQKLRGCRTG EAKLTKGFNL AARFIIHTVG PKYKSRYRTA AESSLYSCYR 151 200 ENSTTRP00000003566/1-497 NVLQLAKEQS MSSVGFCVIN SAKRGYPLED ATHIALXXXX XXXXXXXXXX ENSP00000358451/1-497 NVLQLAKEQS MSSVGFCVIN SAKRGYPLED ATHIALRTVR RFLEIHGETI ENSBTAP00000021791/1-497 NVLQLAKEQS MSSVGFCVIN SAKRGYPLED ATHIALRTVR RFLEIHGETL bmy_11532T0/1-268 ---------- MSSVGFCVIN SAKRG----- -------TVR RFLEIHGETI BACU002667/1-497 NVLQLAKEQS MSSVGFCVIN SAKRGYPLED ATHIALRTVR RFLEIHGETI 201 250 ENSTTRP00000003566/1-497 XXXXXXXXXX XXATYRKLLP LYFPRSLKEE SCSLPYLPAD IGNAEGEPVV ENSP00000358451/1-497 EKVVFAVSDL EEGTYQKLLP LYFPRSLKEE NRSLPYLPAD IGNAEGEPVV ENSBTAP00000021791/1-497 EKVVFAVSEL EEATYQKLLP LYFPRSLKEE SRSLPCLPAD IGNAEGEPVV bmy_11532T0/1-268 EKVVFAVSEL EEATYQKLLP LYFPRSLKEE SCSLPYLPAD IGNAEGEPVV BACU002667/1-497 EKVVFAVSEL EEATYQKLLP LYFPRSLKEE SCSLPYLPAD IGNAEGEPVV 251 300 ENSTTRP00000003566/1-497 PERQIRISEK PGAPEDNQEE EDEGLGVDLS FIGSHAFARM EGDIDKQRRL ENSP00000358451/1-497 PERQIRISEK PGAPEDNQEE EDEGLGVDLS FIGSHAFARM EGDIDKQRKL ENSBTAP00000021791/1-497 PERQIRISEK PGAPEDNQEE EDEGLGVDLS FIGSHAFARM EGDIDKQRRL bmy_11532T0/1-268 PERQIRISEK PGAPEDNQEE EDEGLGVDLS FIGSHAFARM EGDIDKQRRL BACU002667/1-497 PERQIRISEK PGAPEDNQEE EEEGLGVDLS FIGSHAFARM EGDIDKQRRL 301 350 ENSTTRP00000003566/1-497 ILQGQLSEAA LQKQHQRNYN RWLCQARSED LSDIASLKAL YQTGVDNCGR ENSP00000358451/1-497 ILQGQLSEAA LQKQHQRNYN RWLCQARSED LSDIASLKAL YQTGVDNCGR ENSBTAP00000021791/1-497 ILQGQLSEAA LQKQHQRNYN RWLCQARSED LSDIASLKAL YQTGVDNCGR bmy_11532T0/1-268 ILQGQLSEAA LQKQHQRNYN RWLCQARSED LSDIASLKAL YQTGVDNCGR BACU002667/1-497 ILQGQLSEAT LQKQHQRNYN RWLCQARSED LSDIASLKAL YQTGVDNCGR 351 400 ENSTTRP00000003566/1-497 TVMVVVGRNI PVTLIDMDKA LLYFIHVMDH IAVKEYVLVY FHTLTSEYNH ENSP00000358451/1-497 TVMVVVGRNI PVTLIDMDKA LLYFIHVMDH IAVKEYVLVY FHTLTSEYNH ENSBTAP00000021791/1-497 TVMVVVGRNI PVTLIDMDKA LLYFIHVMDH IAVKEYVLVY FHTLTSEYNH bmy_11532T0/1-268 TVMVVVGRNI PVTLIDMDKA LLYFIHVMDH IAVKEYVLVY FHTLTSEYNH BACU002667/1-497 TVMVVVGRNI PVTLIDMDKA LLYFIHVMDH IAVKEYVLVY FHTLTSEYNH 401 450 ENSTTRP00000003566/1-497 LDSDFLKKLY DVVDVKYKRN LKAVYFVHPT FRSKVSTWFF TTFSVSGLKD ENSP00000358451/1-497 LDSDFLKKLY DVVDVKYKRN LKAVYFVHPT FRSKVSTWFF TTFSVSGLKD ENSBTAP00000021791/1-497 LDSDFLKKLY DVVDVKYKRN LKAVYFVHPT FRSKVSTWFF TTFSVSGLKD bmy_11532T0/1-268 LDSDFLKKLY DVVDVKYKRN LKAVYFVHPT FRSKVG---- ---------- BACU002667/1-497 LDSDFLKKLY DVVDVKYKRN LKAVYFVHPT FRSKVSTWFF TTFSVSGLKD 451 500 ENSTTRP00000003566/1-497 KIHHVDSLHQ LFSAISPEQI DFPPFVLEYD ARENGPYYTS YPPSPDL ENSP00000358451/1-497 KIHHVDSLHQ LFSAISPEQI DFPPFVLEYD ARENGPYYTS YPPSPDL ENSBTAP00000021791/1-497 KIHHVDSLHQ LFSAISPEQI DFPPFVLEYD ARENGPYYTS YLPSPDL bmy_11532T0/1-268 ---------- ---------- ---------- -------YLS F------ BACU002667/1-497 KIHHVDSLHQ LFSAISPEQI DFPPFVLEYD ARENGPYYTS YPPSPDL