KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:27 2014 Check: 00 .. Name: ENSTTRP00000011609/1-379 Len: 427 Check: 6198 Weight: 1.00 Name: ENSBTAP00000021849/1-407 Len: 427 Check: 7463 Weight: 1.00 Name: BACU019923/1-379 Len: 427 Check: 1138 Weight: 1.00 Name: bmy_09093T0/1-265 Len: 427 Check: 9635 Weight: 1.00 // 1 50 ENSTTRP00000011609/1-379 MNVIWRNYFS RLRIRKMPHR YRSSYHPVAP LGSRILTDPA KVFEHNMXXX ENSBTAP00000021849/1-407 MNVIWRNYIS CPRMRKVPHR YQSGCHPVAP LGSRILTDPT KVFEHNMWDN BACU019923/1-379 MNVIWRNYFS CLRIRKVPHR CQSSYHPVAP LGSRILTDPA KVFEHNMWDH bmy_09093T0/1-265 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011609/1-379 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK YESEASKYWD TFYKIHKNKF ENSBTAP00000021849/1-407 LEWCTEDLAL SRRKVYDNTA IRIIQNESLK YESEASKYWD TFYKIHKNKF BACU019923/1-379 MQWSKEEEAA ARKKVEENSA VRVLLEEQVK YESEASKYWD TFYKIHKNKF bmy_09093T0/1-265 MQWSKEEEEA ARKKVEENSA VRVLLEEQVK YESEASKYWD TFYKIHKDKF 101 150 ENSTTRP00000011609/1-379 FKDRNWLLRE FPEILPVGQK TEEKVKELSW NHVKVHAANC FSRMHCPTMP ENSBTAP00000021849/1-407 FKDRNWLLRE FPEILPVGQK TEEKVKELSW NHVKINAESF FSKMHCPTMP BACU019923/1-379 FKDRNWLLRE FPEILPVGQK TEEKVKELSW NHVKVHAANC FSRMHCPTMP bmy_09093T0/1-265 FKDRNWLLRE FPEILPVGQK TEEK------ ---------- ---------- 151 200 ENSTTRP00000011609/1-379 EEKNHDREIS GSSDGQNKAG SDFSNLDSKE HRKGPLKTEL FPGSNATFRI ENSBTAP00000021849/1-407 EEKNHYKESS GSSDGQSKAG SDFSKLDSEE YRERPLKTEL FPGSNAAFRI BACU019923/1-379 EEKNHYRESS GSSDGQNKAG SDFSNLDSKE HRKGPLKTEL FPGSNATFRI bmy_09093T0/1-265 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000011609/1-379 LEVGCGAGNS VFPILNTLQN APEFFLYCCD FASGAVELVK SHASYRAAQC ENSBTAP00000021849/1-407 LEVGCGAGNS VFPILNTLQN VPEFFLYCCD FASGAVELVK SHASYRAAQC BACU019923/1-379 LEVGCGAGNS VFPILNTLQN APEFFLYCCD FASGAVELVK SHASYRAAQC bmy_09093T0/1-265 --VGCGAGNS VFPILNTLQN APEFFLYCCD FASGAVELVK SHASYRAXQC 251 300 ENSTTRP00000011609/1-379 CAFVHDVCDD GLPYPFPDGI LDVILLVFVL SSIHPD---- ---------- ENSBTAP00000021849/1-407 CAFVHDVCDH GLPYPFPDGT LDVILLVFVL SSIHPD---- ---------- BACU019923/1-379 CAFVHDVCDD GLPYPFPDGI LDVILLVFVL SSIHPDRRLN VTYKTRLPQS bmy_09093T0/1-265 CAFVHDVCDD GLPYPFPDGI LDVILLVFVL SSIHPD---- ---------- 301 350 ENSTTRP00000011609/1-379 ------XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000021849/1-407 ------RMQG VINRLSKLLK PGGMLLFRDY GRYDKTQLRF KRGHCLSENF BACU019923/1-379 LLLCFQRMQG VVNRLSKLLK PGGMLLFRDY GRYDKTQLRF KRGN------ bmy_09093T0/1-265 ------RMQG VVNRLSKLLK PGGMLLFRDY GRYDKTQLRF KRGHCLSENF 351 400 ENSTTRP00000011609/1-379 XXXXXXXXXX XXXXXEVHDM FCKAGLNEKQ NLVDRRLQVN RKKKVKMHR- ENSBTAP00000021849/1-407 YVRGDGTRAY FFTKGEVHNM FCKAGLDEKQ NLVDRRLQVN RKKKVKMHRV BACU019923/1-379 ---------- ----GEVHDM FCKAGLNEKQ NLVDRRLQVN RKKKVKMHR- bmy_09093T0/1-265 YVRGDGTRAY FFTKGEVHDM FCKAGLNEKQ NLVDRRLQVN RKKKVKMHRV 401 450 ENSTTRP00000011609/1-379 ---------- ---------- ------- ENSBTAP00000021849/1-407 WVQGKFQKPL HLTQKSSNLV FSVLSHE BACU019923/1-379 ---------- ---------- ------- bmy_09093T0/1-265 WVQGKFQKPL PFT------- -------