KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:15:28 2014 Check: 00 ..
Name: ENSP00000305465/1-584 Len: 657 Check: 906 Weight: 1.00
Name: ENSBTAP00000021853/1-578 Len: 657 Check: 1307 Weight: 1.00
Name: ENSTTRP00000001334/1-579 Len: 657 Check: 2414 Weight: 1.00
Name: bmy_06293T0/1-474 Len: 657 Check: 7192 Weight: 1.00
Name: BACU012909/1-601 Len: 657 Check: 8416 Weight: 1.00
//
1 50
ENSP00000305465/1-584 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000021853/1-578 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000001334/1-579 ---------- ---------- ---------- ---------- ----------
bmy_06293T0/1-474 --MPS----- ---------- ---------- ---------- --PPEG----
BACU012909/1-601 MLWPQGVQEG TPLLPLDFHP AASGSCSGHK GKPGPCSSGA NFPPQGPQSV
51 100
ENSP00000305465/1-584 ---------- ---------- -MDLLWMPLL LVAACV--SA VHSSPEVNAG
ENSBTAP00000021853/1-578 ---------- ---------- -MELLCMSLL LVASCV--GT VQGSPEMNGK
ENSTTRP00000001334/1-579 ---------- ---------- -MELLWMSLL LVASCV--GP VQGSPEVDVK
bmy_06293T0/1-474 ---------- ---------- --QMAWTTVK IE-------- ----------
BACU012909/1-601 LPRPWLGPSG PEKNQASCRT AMQLLWMSLL LVASCVLCCT VQGSPETD--
101 150
ENSP00000305465/1-584 VSSIHITKPV HILEERSLLV LTPAGLTQML NQTRFLMVLF HNPSSKQSRN
ENSBTAP00000021853/1-578 KESINMSQPL HILVEENLMV LTPAGLTQML NETRFLMVLF HNPSSKQSRS
ENSTTRP00000001334/1-579 EASINMSQPL HILVEKNLMV LTPAGLTQML NETRFLMVLF HNPSSEQSRD
bmy_06293T0/1-474 ------TQPW GWC------- --PGG----- ---------- ----------
BACU012909/1-601 ---VNMSQPL HILVEKNLMV LTPAGLTQML NETRFLMVLF HNPSSKQSRN
151 200
ENSP00000305465/1-584 LAEELGKAVE IMGKGKNGIG FGKVDITIEK ELQQEFGITK APELKLFFEG
ENSBTAP00000021853/1-578 LAEELGKAVE IMGKGKNGIG FGKVDVTVEK ELQKEFDVKK APELKLFFEG
ENSTTRP00000001334/1-579 LAEELGKAVE IMGKGKNGIG FGKVDITVEK ELQKEFDVKK APELKLFFEG
bmy_06293T0/1-474 ---------- ---------- ---------- ---------- --------GG
BACU012909/1-601 LAEELGKAVE IMGKGKNGIG FGKVDVTVEK DLQKEFDVKK APELKLFFEG
201 250
ENSP00000305465/1-584 NRSEPISCKG VVESAALVVW LRRQISQKAF LFNSSEQVAE FVISRPLVIV
ENSBTAP00000021853/1-578 NRSQPISCEG VVESTALVVW LRRQISQKAF LFSNSNEIAE FVNSRPLVII
ENSTTRP00000001334/1-579 NRSEPISCKG VVESTALVVW LRRQISQKAF LFSDTSEIAE FVNSRPLVII
bmy_06293T0/1-474 D------CR- VVESTALVVW LRRQISQKAF LFSDTNEIAE FVNSRPLVII
BACU012909/1-601 NRSEPISCKG VVESTALVVW LRRQISQKAF LFSDANEIAE FVNSRPLVII
251 300
ENSP00000305465/1-584 GFFQDLEEEV AELFYDVIKD FPELTFGVIT IGNVIGRFHV TLDSVLVFKK
ENSBTAP00000021853/1-578 GFFQDLEEEV AELFYDMIKD FPELTFGAIS IRHAIGRYHV TLDSVIVFKK
ENSTTRP00000001334/1-579 GFFQDLEEEV AELFYDVIKD FPELTFGVIL IRNAIGRFHV TLDSVLVFRK
bmy_06293T0/1-474 GFFQDLEEEV AELFYDVIKD FPELTFGVIL IRNAIGRFHV TLDSVLVFRK
BACU012909/1-601 GFFQ------ ---------- ---------- ---------- ----------
301 350
ENSP00000305465/1-584 GKIVNRQKLI NDSTNKQELN RVIKQHLTDF VIEYNTENKD LISELHIMSH
ENSBTAP00000021853/1-578 GRIVNRQELI NDNVNKQILN KLIKEQLTDL VIEYNTESRD LIYELNILNH
ENSTTRP00000001334/1-579 GKIVNRQELI DDNANKHILN QLIKQHLTDF VIEYNTENKD LIYELHILNH
bmy_06293T0/1-474 GKIVNRQELI DDSTNKHILN QLIKQHLTDF VIEYNTENKD LIYELNILNH
BACU012909/1-601 GKIVNRQELI DDSTNKHILN QLIKQHLTDF VIEYNTENKD LIYELNILNH
351 400
ENSP00000305465/1-584 MLLFVSKSSE SYGIIIQHYK LASKEFQNKI LFILVDADEP RNGRVFKYFR
ENSBTAP00000021853/1-578 MLLFVSKSSE SFRIIMQHYK LASKIFQNKI LFILVDTDVP RNRRVFKYFQ
ENSTTRP00000001334/1-579 MLLFVSKSSK SFRMTMQHYK LASKEFQNKI LFILVDADEP RNGRVLEYFR
bmy_06293T0/1-474 MLLFVSKSSK SFGMIMQHYK LASKKFQNKI LFILVDADEP RNGRVFEYFR
BACU012909/1-601 MLLFVSKSSK SFRMIMQHYK LASKKFQNKI LFILVDADEP RNGRVFEYFR
401 450
ENSP00000305465/1-584 VTEVDIPSVQ ILNLSSDARY KMPSDDITYE SLKKFGRSFL SKNATKHQSS
ENSBTAP00000021853/1-578 IREVDVPCIQ IINLSSDARY KMPFEEITYE NLRNFGQSFL NRKAKKHLSS
ENSTTRP00000001334/1-579 IAEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQAS
bmy_06293T0/1-474 IXEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQSS
BACU012909/1-601 IAEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQSS
451 500
ENSP00000305465/1-584 EEIPKYWDQG LVKQLVGKNF NVVVFDKEKD VFVMFYAPWS KKCKMLFPLL
ENSBTAP00000021853/1-578 EEIPNYWDQG LVKQLVGKNF NVVVFDKERD VFVMFYAPWS QKCMVLFPVL
ENSTTRP00000001334/1-579 EEIPKYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS PKCRALFPVL
bmy_06293T0/1-474 EEIPNYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS QKCRALFPVL
BACU012909/1-601 EEIPNYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS QKCRVLFPVL
501 550
ENSP00000305465/1-584 EELGRKYQNH STIIIAKIDV TANDIQLMYL DRYPFFRLFP SGSQQAVLYK
ENSBTAP00000021853/1-578 EELGRKYQNH STVTIAKIDI TANDIELTYQ DRYPFFRLFP TDSQKAVLYN
ENSTTRP00000001334/1-579 EELGRKYQNH STVTIAKIDI TANDVQLTHL DRYPIFRLFP ADSQQAVLYK
bmy_06293T0/1-474 EELGRKYQNH STVTIAKIDI TANDLQLPYP DRYPVFRLFP ADSQQAVLYK
BACU012909/1-601 EELGRKYQNH STVTIAKIDI TASELQLTYP DRYPVFRLFP ADSQQAVLYK
551 600
ENSP00000305465/1-584 GEHTLKGFSD FLESHIKTKI EDEDELLSVE QNEVIEEEVL AEEKEVPMMR
ENSBTAP00000021853/1-578 GEHTLKGFSD FLESQIKIQI EDEDELLSVE QSEETEKKVL AEEKEEHFMK
ENSTTRP00000001334/1-579 GEHTLKGFSD FLESQIEIQT EDEDEXXXXX XXXXTEKEVL VEEKEVPFTK
bmy_06293T0/1-474 GEHTLKGFSD FLESQIEIQT EDEDELLSVE QSEVTEKEVL GEEKEVPFMK
BACU012909/1-601 GEHTLKGFSD FLESQIETQT EDEDELLSVE QSEVTEKEVL GEEKEVPFTK
601 650
ENSP00000305465/1-584 KGLPEQQSPE LENMTKYVSK LEEPAGKKKT SEEVVVVVAK PKGPPVQKKK
ENSBTAP00000021853/1-578 KELPEQNLPE LENVT----K LEGPTEQKEK AEE--EKVAE PKEPPTQAEK
ENSTTRP00000001334/1-579 KELPEQKLRE LENLT----K REGPAGQKEM AEE-EEKVAE PEGPPGQEKK
bmy_06293T0/1-474 KELPEQKLSE LENLT----K LEGPAGQKET AEE-EEKVAE PKGPPGQEKK
BACU012909/1-601 KELPEQKLPE LENLT----K LEGPAGQKET AEE-EEKVAE PKGPPGQEKK
651 700
ENSP00000305465/1-584 PKVKEEL
ENSBTAP00000021853/1-578 PRMKEEL
ENSTTRP00000001334/1-579 PRVKEEL
bmy_06293T0/1-474 PRVKEEL
BACU012909/1-601 PRVKEEL