KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:28 2014 Check: 00 .. Name: ENSP00000305465/1-584 Len: 657 Check: 906 Weight: 1.00 Name: ENSBTAP00000021853/1-578 Len: 657 Check: 1307 Weight: 1.00 Name: ENSTTRP00000001334/1-579 Len: 657 Check: 2414 Weight: 1.00 Name: bmy_06293T0/1-474 Len: 657 Check: 7192 Weight: 1.00 Name: BACU012909/1-601 Len: 657 Check: 8416 Weight: 1.00 // 1 50 ENSP00000305465/1-584 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021853/1-578 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001334/1-579 ---------- ---------- ---------- ---------- ---------- bmy_06293T0/1-474 --MPS----- ---------- ---------- ---------- --PPEG---- BACU012909/1-601 MLWPQGVQEG TPLLPLDFHP AASGSCSGHK GKPGPCSSGA NFPPQGPQSV 51 100 ENSP00000305465/1-584 ---------- ---------- -MDLLWMPLL LVAACV--SA VHSSPEVNAG ENSBTAP00000021853/1-578 ---------- ---------- -MELLCMSLL LVASCV--GT VQGSPEMNGK ENSTTRP00000001334/1-579 ---------- ---------- -MELLWMSLL LVASCV--GP VQGSPEVDVK bmy_06293T0/1-474 ---------- ---------- --QMAWTTVK IE-------- ---------- BACU012909/1-601 LPRPWLGPSG PEKNQASCRT AMQLLWMSLL LVASCVLCCT VQGSPETD-- 101 150 ENSP00000305465/1-584 VSSIHITKPV HILEERSLLV LTPAGLTQML NQTRFLMVLF HNPSSKQSRN ENSBTAP00000021853/1-578 KESINMSQPL HILVEENLMV LTPAGLTQML NETRFLMVLF HNPSSKQSRS ENSTTRP00000001334/1-579 EASINMSQPL HILVEKNLMV LTPAGLTQML NETRFLMVLF HNPSSEQSRD bmy_06293T0/1-474 ------TQPW GWC------- --PGG----- ---------- ---------- BACU012909/1-601 ---VNMSQPL HILVEKNLMV LTPAGLTQML NETRFLMVLF HNPSSKQSRN 151 200 ENSP00000305465/1-584 LAEELGKAVE IMGKGKNGIG FGKVDITIEK ELQQEFGITK APELKLFFEG ENSBTAP00000021853/1-578 LAEELGKAVE IMGKGKNGIG FGKVDVTVEK ELQKEFDVKK APELKLFFEG ENSTTRP00000001334/1-579 LAEELGKAVE IMGKGKNGIG FGKVDITVEK ELQKEFDVKK APELKLFFEG bmy_06293T0/1-474 ---------- ---------- ---------- ---------- --------GG BACU012909/1-601 LAEELGKAVE IMGKGKNGIG FGKVDVTVEK DLQKEFDVKK APELKLFFEG 201 250 ENSP00000305465/1-584 NRSEPISCKG VVESAALVVW LRRQISQKAF LFNSSEQVAE FVISRPLVIV ENSBTAP00000021853/1-578 NRSQPISCEG VVESTALVVW LRRQISQKAF LFSNSNEIAE FVNSRPLVII ENSTTRP00000001334/1-579 NRSEPISCKG VVESTALVVW LRRQISQKAF LFSDTSEIAE FVNSRPLVII bmy_06293T0/1-474 D------CR- VVESTALVVW LRRQISQKAF LFSDTNEIAE FVNSRPLVII BACU012909/1-601 NRSEPISCKG VVESTALVVW LRRQISQKAF LFSDANEIAE FVNSRPLVII 251 300 ENSP00000305465/1-584 GFFQDLEEEV AELFYDVIKD FPELTFGVIT IGNVIGRFHV TLDSVLVFKK ENSBTAP00000021853/1-578 GFFQDLEEEV AELFYDMIKD FPELTFGAIS IRHAIGRYHV TLDSVIVFKK ENSTTRP00000001334/1-579 GFFQDLEEEV AELFYDVIKD FPELTFGVIL IRNAIGRFHV TLDSVLVFRK bmy_06293T0/1-474 GFFQDLEEEV AELFYDVIKD FPELTFGVIL IRNAIGRFHV TLDSVLVFRK BACU012909/1-601 GFFQ------ ---------- ---------- ---------- ---------- 301 350 ENSP00000305465/1-584 GKIVNRQKLI NDSTNKQELN RVIKQHLTDF VIEYNTENKD LISELHIMSH ENSBTAP00000021853/1-578 GRIVNRQELI NDNVNKQILN KLIKEQLTDL VIEYNTESRD LIYELNILNH ENSTTRP00000001334/1-579 GKIVNRQELI DDNANKHILN QLIKQHLTDF VIEYNTENKD LIYELHILNH bmy_06293T0/1-474 GKIVNRQELI DDSTNKHILN QLIKQHLTDF VIEYNTENKD LIYELNILNH BACU012909/1-601 GKIVNRQELI DDSTNKHILN QLIKQHLTDF VIEYNTENKD LIYELNILNH 351 400 ENSP00000305465/1-584 MLLFVSKSSE SYGIIIQHYK LASKEFQNKI LFILVDADEP RNGRVFKYFR ENSBTAP00000021853/1-578 MLLFVSKSSE SFRIIMQHYK LASKIFQNKI LFILVDTDVP RNRRVFKYFQ ENSTTRP00000001334/1-579 MLLFVSKSSK SFRMTMQHYK LASKEFQNKI LFILVDADEP RNGRVLEYFR bmy_06293T0/1-474 MLLFVSKSSK SFGMIMQHYK LASKKFQNKI LFILVDADEP RNGRVFEYFR BACU012909/1-601 MLLFVSKSSK SFRMIMQHYK LASKKFQNKI LFILVDADEP RNGRVFEYFR 401 450 ENSP00000305465/1-584 VTEVDIPSVQ ILNLSSDARY KMPSDDITYE SLKKFGRSFL SKNATKHQSS ENSBTAP00000021853/1-578 IREVDVPCIQ IINLSSDARY KMPFEEITYE NLRNFGQSFL NRKAKKHLSS ENSTTRP00000001334/1-579 IAEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQAS bmy_06293T0/1-474 IXEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQSS BACU012909/1-601 IAEADIPCVQ ILNLSSDARY KMPFEEITYE NLKKFGQSFL NRKAKKHQSS 451 500 ENSP00000305465/1-584 EEIPKYWDQG LVKQLVGKNF NVVVFDKEKD VFVMFYAPWS KKCKMLFPLL ENSBTAP00000021853/1-578 EEIPNYWDQG LVKQLVGKNF NVVVFDKERD VFVMFYAPWS QKCMVLFPVL ENSTTRP00000001334/1-579 EEIPKYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS PKCRALFPVL bmy_06293T0/1-474 EEIPNYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS QKCRALFPVL BACU012909/1-601 EEIPNYWDQG PVKQLVGKNF NVIVFDKERD VFVMFYAPWS QKCRVLFPVL 501 550 ENSP00000305465/1-584 EELGRKYQNH STIIIAKIDV TANDIQLMYL DRYPFFRLFP SGSQQAVLYK ENSBTAP00000021853/1-578 EELGRKYQNH STVTIAKIDI TANDIELTYQ DRYPFFRLFP TDSQKAVLYN ENSTTRP00000001334/1-579 EELGRKYQNH STVTIAKIDI TANDVQLTHL DRYPIFRLFP ADSQQAVLYK bmy_06293T0/1-474 EELGRKYQNH STVTIAKIDI TANDLQLPYP DRYPVFRLFP ADSQQAVLYK BACU012909/1-601 EELGRKYQNH STVTIAKIDI TASELQLTYP DRYPVFRLFP ADSQQAVLYK 551 600 ENSP00000305465/1-584 GEHTLKGFSD FLESHIKTKI EDEDELLSVE QNEVIEEEVL AEEKEVPMMR ENSBTAP00000021853/1-578 GEHTLKGFSD FLESQIKIQI EDEDELLSVE QSEETEKKVL AEEKEEHFMK ENSTTRP00000001334/1-579 GEHTLKGFSD FLESQIEIQT EDEDEXXXXX XXXXTEKEVL VEEKEVPFTK bmy_06293T0/1-474 GEHTLKGFSD FLESQIEIQT EDEDELLSVE QSEVTEKEVL GEEKEVPFMK BACU012909/1-601 GEHTLKGFSD FLESQIETQT EDEDELLSVE QSEVTEKEVL GEEKEVPFTK 601 650 ENSP00000305465/1-584 KGLPEQQSPE LENMTKYVSK LEEPAGKKKT SEEVVVVVAK PKGPPVQKKK ENSBTAP00000021853/1-578 KELPEQNLPE LENVT----K LEGPTEQKEK AEE--EKVAE PKEPPTQAEK ENSTTRP00000001334/1-579 KELPEQKLRE LENLT----K REGPAGQKEM AEE-EEKVAE PEGPPGQEKK bmy_06293T0/1-474 KELPEQKLSE LENLT----K LEGPAGQKET AEE-EEKVAE PKGPPGQEKK BACU012909/1-601 KELPEQKLPE LENLT----K LEGPAGQKET AEE-EEKVAE PKGPPGQEKK 651 700 ENSP00000305465/1-584 PKVKEEL ENSBTAP00000021853/1-578 PRMKEEL ENSTTRP00000001334/1-579 PRVKEEL bmy_06293T0/1-474 PRVKEEL BACU012909/1-601 PRVKEEL