KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:29 2014 Check: 00 .. Name: ENSP00000318480/1-773 Len: 775 Check: 5653 Weight: 1.00 Name: ENSTTRP00000015202/1-764 Len: 775 Check: 4884 Weight: 1.00 Name: ENSBTAP00000021868/1-717 Len: 775 Check: 2335 Weight: 1.00 Name: BACU001745/1-593 Len: 775 Check: 3841 Weight: 1.00 Name: bmy_07528T0/1-647 Len: 775 Check: 9674 Weight: 1.00 // 1 50 ENSP00000318480/1-773 MFSLSSTVQP QVTVPLSHLI NAFHTPKNTS VSLSGVSVSQ NQHRDVVPEH ENSTTRP00000015202/1-764 MFSLSNTVQP QVTVPLSHLI NAFHSPKNTS VSVSA-SVSQ NQHRDVVSEH ENSBTAP00000021868/1-717 MFSLSSTVQP QVTVPLSHLI NAFHSPKNTP VSVSA-SISQ NQHRDVVSEH BACU001745/1-593 ---------- -VTVPLSHLI NAFHSPKNTS ISVSA-SISQ NQHRDVVSEH bmy_07528T0/1-647 MFSLSSTVQP QVTVPLSHLI NAFHSPKNTS ISVSA-SISQ NQHRDVVSEH 51 100 ENSP00000318480/1-773 EAPSSECMFS DFLTKLNIVS IGKGKIFEGY RSMFMEPAKR MKKSLDTTDN ENSTTRP00000015202/1-764 EAPSSECLSS ALLLN---VL ANKGKIFKGA KSMNMEPKRM KRSETTNNQH ENSBTAP00000021868/1-717 EAPSNE---- ---------- ---------- ---------- ---------- BACU001745/1-593 EAPSNE---- ---------- ---------- ---------- ---------- bmy_07528T0/1-647 EAPSNE---- ---------- ---------- ---------- ---------- 101 150 ENSP00000318480/1-773 WHIRPEPFSL SIPPSLNLRD LGLSELKIGQ IDQLVENLLP GFCKGKNISS ENSTTRP00000015202/1-764 IH-----FSL TIPXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000021868/1-717 ---------- ---PVLNLRD LGLSELKIGQ IDQLVDSLLP GFYKDKNVSS BACU001745/1-593 ---------- ---PILNLRD LGLSELKIGQ IDQLVDSLLP GICKDKNVSS bmy_07528T0/1-647 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000318480/1-773 HWHTSHVSAQ SFFENKYGNL DIFSTLRSSC LYRHHSRALQ SICSDLQYWP ENSTTRP00000015202/1-764 XXXXXXXXXX XXXXXXXXCL DIFSTLRSSC LYRQHSRTLK RICSDLQYWP ENSBTAP00000021868/1-717 HWHTSHVSAQ SFFENKYGCL DIFSTLRSSC LYRQHSRTLK RICSDLQYWP BACU001745/1-593 HWHTSHVSAQ SFFENKY--- ---------- ---------- ---------- bmy_07528T0/1-647 ---------- SFFENKYGCL DIFSTLRSSC LYRQHSRTLK RICSDLQYWP 201 250 ENSP00000318480/1-773 VFIQSRGFKT LKSRTRRLQS TSERLAETQN IAPSFVKGFL LRDRGSDVES ENSTTRP00000015202/1-764 VFIQSRGFKT LKSRTRRLQS TSERLAETQH TAPSFVKGFL LRDRGSDIES ENSBTAP00000021868/1-717 GFIQSRGFKT LKSRTRRLQS TSERLAETQH TAPSFVKGFL LRDRGSDVES BACU001745/1-593 VFVQSRGFKT LKSRTRRLQS TSERLAETQH TAPSFVKGFL LRDRGSDIES bmy_07528T0/1-647 VFVQSRGFKT LKSRTRRLQS TSERLAETQH TAPSFVKGFL LRDRGSDIES 251 300 ENSP00000318480/1-773 LDKLMKTKNI PEAHQDAFKT GFAEGFLKAQ ALTQKTNDSL RRTRLILFVL ENSTTRP00000015202/1-764 LDKLMKTKNI PEAHQDAFKT GFAEGFLKAQ ALTQKTNDSL RRTRLIVFIL ENSBTAP00000021868/1-717 LDKLMKTKNI PEAHQDAFKT GFAEGFLKAQ ALTQKTNDSL RRTRLIVFIL BACU001745/1-593 LDKLMKTKNI PEAHQDAFKT GFAEGFLKAQ ALTQKTN--- ---------- bmy_07528T0/1-647 LDKLMKTKNI PEAHQDAFKT GFAEGFLKAQ ALTQKTNDSL RRTRLIVFIL 301 350 ENSP00000318480/1-773 LLFGIYGLLK NPFLSVRFRT TTGLDSAVDP VQMKNVTFEH VKGVEEAKQE ENSTTRP00000015202/1-764 LVVGIYGLLK NPFLSVRFRT TTGLDSAVDP VQMKNVTFEH VKGVEEAKQE ENSBTAP00000021868/1-717 LVVGIYGLLK NPFLSVRFRT TTGLDSAVDP VQMKNVTFEH VKGVEEAKQE BACU001745/1-593 ---------- -----VRFRT TTGLDSAVDP VQMKNVTFEH VKGVEEAKQE bmy_07528T0/1-647 LVVGIYGLLK NPFLSVRFRT TTGLDSAVDP VQMKNVTFEH VKGVEEAKQE 351 400 ENSP00000318480/1-773 LQEVVEFLKN PQKFTILGGK LPKGILLVGP PGTGKTLLAR AVAGEADVPF ENSTTRP00000015202/1-764 LQEVVEFLKN PQKFTVLGGK LPKGILLVGP PGTGKTLLAR AVAGEADVPF ENSBTAP00000021868/1-717 LQEVVEFLKN PQKFTVLGGK LPKGILLVGP PGTGKTLLAR AVAGEADVPF BACU001745/1-593 LQEVVEFLKN PQKFTVLGGK LPKGILLVGP PGTGKTLLAR AVAGEADVPF bmy_07528T0/1-647 LQEVVEFLKN PQKFTVLGGK LPKGILLVGP PGTGKTLLAR AVAGEADVPF 401 450 ENSP00000318480/1-773 YYASGSEFDE MFVGVGASRI RNLFREAKAN APCVIFIDEL DSVGGKRIES ENSTTRP00000015202/1-764 YYASGSEFDE MFVGVGASRI RNLFREAKAN APCVIFIDEL DSVGGKRIES ENSBTAP00000021868/1-717 YYASGSEFDE MFVGVGASRI RNLFREAKAN APCVIFIDEL DSVGGKRIES BACU001745/1-593 YYASGSEFDE MFVGVGASRI RNLFREAKAN APCVIFIDEL DSVGGKRIES bmy_07528T0/1-647 YYASGSEFDE MFVGVGASRI RNLFREAKAN APCVIFIDEL DSVGGKRIES 451 500 ENSP00000318480/1-773 PMHPYSRQTI NQLLAEMDGF KPNEGVIIIG ATNFPEALDN ALIRPGRFDM ENSTTRP00000015202/1-764 PMHPYSRQTI NQLLAEMDGF KPNEGVIIIG ATNFPEALDN ALIRPGRFDM ENSBTAP00000021868/1-717 PMHPYSRQTI NQLLAEMDGF KPNEGVIIIG ATNFPEALDN ALIRPGRFDM BACU001745/1-593 PMHPYSRQTI NQLLAEMDG- ---------- ---------- ALIRPGRFDM bmy_07528T0/1-647 PMHPYSRQTI NQLLAEMDG- ---------- ---------- ALIRPGRFDM 501 550 ENSP00000318480/1-773 QVTVPRPDVK GRTEILKWYL NKIKFDQSVD PEIIARGTVG FSGAELENLV ENSTTRP00000015202/1-764 QVTVPRPDVK GRTEILKWYL NKIKFDQSVD PEIIARGTVG FSGAELENLV ENSBTAP00000021868/1-717 QVTVPRPDVK GRTEILKWYL NKIKFDQSVD PEIIARGTVG FSGAELENLV BACU001745/1-593 QVTVPRPDVK GRTEILKWYL NKIKFDQSVD PEIIARGTVG FSGAELENLV bmy_07528T0/1-647 QVTVPRPDVK GRTEILKWYL NKIKFDQSVD PEIIARGTVG FSGAELENLV 551 600 ENSP00000318480/1-773 NQAALKAAVD GKEMVTMKEL EFSKDKILMG PERRSVEIDN KNKTITAYHE ENSTTRP00000015202/1-764 NQAALKAAVD GKEMVTMKEL EFSKDKILMG PERRSVEIDN KNKTITAYHE ENSBTAP00000021868/1-717 NQAALKAAVD GKEMVTMKEL EFSKDKILMG PERRSVEIDN KNKTITAYHE BACU001745/1-593 NQAALKAAVD GKEMVTMKEL EFSKDKILMG PERRSVEIDN KNKTITAYHE bmy_07528T0/1-647 NQAALKAAVD GKEMVTMKEL EFSKDKILMG PERRSVEIDN KNKTITAYHE 601 650 ENSP00000318480/1-773 SGHAIIAYYT KDAMPINKAT IMPRGPTLGH VSLLPENDRW NETRAQLLAQ ENSTTRP00000015202/1-764 SGHAIIAYYT KDAMPINKAT IMPRGPTLGH VSLLPENDRW NETRAQLLAQ ENSBTAP00000021868/1-717 SGHAIIAYYT KDAMPINKAT IMPRGPTLGH VSLLPENDRW NETRAQLLAQ BACU001745/1-593 SGHAIIAYYT KDAMPINKAT IMPRGPTLGH VSLLPENDRW NETRAQLLAQ bmy_07528T0/1-647 SGHAIIAYYT KDAMPINKAT IMPRGPTLGH VSLLPENDRW NETRAQLLAQ 651 700 ENSP00000318480/1-773 MDVSMGGRVA EELIFGTDHI TTG--ASSDF DNATKIAKRM VTKFGMSEKL ENSTTRP00000015202/1-764 MDVSMGGRVA EELIFGADHI TTG--ASSDF DNATKIAKQM VTKFGMSEKL ENSBTAP00000021868/1-717 MDVSMGGRVA EELIFGSDHI TTGYCASSDF DNATKIAKRM VTKFGMSEKL BACU001745/1-593 MDVSMGGRVA EELIFGTDYI TTG--ASSDF DNATKIAKRM VTKFGMSEK- bmy_07528T0/1-647 MDVSMGGRVA EELIFGTDHI TTG--ASSDF DNATKIAKRM VTKFGMSEKL 701 750 ENSP00000318480/1-773 GVMTYSDTGK LSPETQSAIE QEIRILLRDS YERAKHILKT HAKEHKNLAE ENSTTRP00000015202/1-764 GVMTYSDTGK LSPETQSAIE QEIRILLRDS YERAKHILKT HAKEHKNLAE ENSBTAP00000021868/1-717 GVMTYSDTGK LSPETQSAIE QEIRILLRDS YERAKHILKT HAKEHKNLAE BACU001745/1-593 ---------- ---------- --------DS YERAKHILKT HAKEHKNLAE bmy_07528T0/1-647 GVMTYSDTGK LSPETQSAIE QEIRILLRDS YERAKHILKT HAKEHKNLAE 751 800 ENSP00000318480/1-773 ALLTYETLDA KEIQIVLEGK KLEVR ENSTTRP00000015202/1-764 ALLTYETLDA KEIQIVLEGK KLDVR ENSBTAP00000021868/1-717 ALLTYETLDA KEIQIVLEGK KLEVR BACU001745/1-593 ALLTYETLDA KEIQIVLEGK KLDVR bmy_07528T0/1-647 ALLTYETLDA KEIQIVLEGK KLDVR