KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:15:32 2014  Check: 00 ..

 Name: ENSP00000419395/1-187     Len:    187  Check:  4620  Weight:  1.00
 Name: bmy_16417T0/1-166         Len:    187  Check:  8997  Weight:  1.00
 Name: ENSBTAP00000021871/1-187  Len:    187  Check:  3384  Weight:  1.00
 Name: BACU017226/1-187          Len:    187  Check:  5626  Weight:  1.00
 Name: ENSTTRP00000004131/1-180  Len:    187  Check:  8608  Weight:  1.00

//


                          1                                                   50
ENSP00000419395/1-187     MWCASPVAVV AFCAGLLVSH PVLTQGQEAG GRPGADCEVC KEFLNRFYKS 
bmy_16417T0/1-166         --CGSGDIVH KYIIYLFLL- ---------- --------VC QEFLNRFYNS 
ENSBTAP00000021871/1-187  MWCGGAAAMV AFCAGLWVSN PGRAQGQEAG GIPGADCEVC QEFLSRFYNS 
BACU017226/1-187          MWCGSPAAVV AFCAGLWVSN PGRAQGQEAG GRLGADCEVC QEFLNRFYNS 
ENSTTRP00000004131/1-180  MWCGSPAAVV AFCAGLWVSN PGRAQGQEAG GRLGADCEVC QEFLNRFYNS 


                          51                                                 100
ENSP00000419395/1-187     LIDRGVNFSL DTIEKELISF CLDTKGKENR LCYYLGATKD AATKILSEVT 
bmy_16417T0/1-166         LIARGVNFSL DTIEKELISF CLDVKGKENR LCYYLGATKD AATKILSEVT 
ENSBTAP00000021871/1-187  LIARGVNFSL DTIEKELINF CLDVKGKENR LCYYLGATKD AATKILSEVT 
BACU017226/1-187          LIARGVNFSL DTIEKELISF CLDVKGKENR LCYYLGATKD AATKILSEVT 
ENSTTRP00000004131/1-180  LIARGVNFSL DTIEKELTSF CLDVKGKENR LCYYLGATKD AATKILSEVT 


                          101                                                150
ENSP00000419395/1-187     RPMSVHMPAM KICEKLKKLD SQICELKYEK TLDLASVDLR KMRVAELKQI 
bmy_16417T0/1-166         RPMSVHMPAV KICEKLKRMD SQICELKYEK KLDLASVDLS KMRVAELKQI 
ENSBTAP00000021871/1-187  RPMSVHMPAA KICEKLKKMD SQICELKYEK KLDLASVDLS KMRVAELKQI 
BACU017226/1-187          RPMSVHMPAV KICEKLKKMD SQICELKYEK KLDLASVDLS KMRVAELKQI 
ENSTTRP00000004131/1-180  RPMSVHMPAV KICEKLKKMD SQICEL-YEK KLDLASVDLS KMRVAELKQI 


                          151                                                200
ENSP00000419395/1-187     LHSWGEECRA CAEKTDYVNL IQELAPKYAA THPKTEL 
bmy_16417T0/1-166         LYSWGEECRA CAEKTDYVNL IKELAPKYTA TYPKTEL 
ENSBTAP00000021871/1-187  LHSWGEECRA CAEKTDYVNL IKELAPKYAA THPQTEL 
BACU017226/1-187          LYSWGEECRA CAEKTDYVNL IKELAPKYTA TYPKTEL 
ENSTTRP00000004131/1-180  LYSWGEECRA CAEKTDYVNL IKELAPKYTA T------