KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:38 2014 Check: 00 .. Name: BACU016598/1-663 Len: 709 Check: 2929 Weight: 1.00 Name: ENSP00000350170/1-621 Len: 709 Check: 1837 Weight: 1.00 Name: ENSTTRP00000013937/1-620 Len: 709 Check: 7153 Weight: 1.00 Name: bmy_16092T0/1-652 Len: 709 Check: 2437 Weight: 1.00 Name: ENSBTAP00000021880/1-621 Len: 709 Check: 1846 Weight: 1.00 // 1 50 BACU016598/1-663 MAELTVEVRG SNGAFYKGFI KDVHEDSLTV VFENNWQPER QVPFNEVRLP ENSP00000350170/1-621 MAELTVEVRG SNGAFYKGFI KDVHEDSLTV VFENNWQPER QVPFNEVRLP ENSTTRP00000013937/1-620 MAELTVEVRG SHGAFY-GFI KDVHEDSLTV VFENNWQPER QVPFNEVRLP bmy_16092T0/1-652 MAELTVEVRG SNGAFYKGFI KDVHEDSLTV VFENNWQPER QVPFNEVRLP ENSBTAP00000021880/1-621 MAELTVEVRG SNGAFYKGFI KDVHEDSLTV VFENNWQPER QVPFNEVRLP 51 100 BACU016598/1-663 PPPDIKKEIS EGDEVEVYSR ANDQEPCGWW LAKVRMMKGE FYVIEYAACD ENSP00000350170/1-621 PPPDIKKEIS EGDEVEVYSR ANDQEPCGWW LAKVRMMKGE FYVIEYAACD ENSTTRP00000013937/1-620 PPPDIKKEIS EGDEVEVYSR ANDQEPCGWW LAKVRMMKGE FYVIEYAACD bmy_16092T0/1-652 PPPDIKKEIS EGDEVEVYSR ANDQEPCGWW LAKVRMMKGE FYVIEYAACD ENSBTAP00000021880/1-621 PPPDIKKEIS EGDEVEVYSR ANDQEPCGWW LAKVRMMKGE FYVIEYAACD 101 150 BACU016598/1-663 ATYNEIVTFE RLRPVNQNKT VKKNTFFKCT VDVPEDLREA CANENAHKDF ENSP00000350170/1-621 ATYNEIVTFE RLRPVNQNKT VKKNTFFKCT VDVPEDLREA CANENAHKDF ENSTTRP00000013937/1-620 ATYNEIVTFE RLRPVNQNKT VKKNTFFKCT VDVPEDLREA CANENAHKDF bmy_16092T0/1-652 ATYNEIVTFE RLRPVNQNKT VKKNTFFKCT VDVPEDLREA CANENAHKDF ENSBTAP00000021880/1-621 ATYNEIVTFE RLRPVNQNKT VKKNTFFKCT VDVPEDLREA CANENAHKDF 151 200 BACU016598/1-663 KKAVGACRIF YHPETTQLMI LSASEATVKR VNILSDMHLR SIRTKLMLMS ENSP00000350170/1-621 KKAVGACRIF YHPETTQLMI LSASEATVKR VNILSDMHLR SIRTKLMLMS ENSTTRP00000013937/1-620 KKAVGACRIF YHPETTQLMI LSASEATVKR VNILSDMHLR SIRTKLMLMS bmy_16092T0/1-652 KKAVGACRIF YHPETTQLMI LSASEATVKR VNILSDMHLR SIRTKLMLMS ENSBTAP00000021880/1-621 KKAVGACRIF YHPETTQLMI LSASEATVKR VNILSDMHLR SIRTKLMLMS 201 250 BACU016598/1-663 RNEEATKHLE CTKQLAAAFH EEFVVREDLM GLAIGTHGSN IQQARKVPGV ENSP00000350170/1-621 RNEEATKHLE CTKQLAAAFH EEFVVREDLM GLAIGTHGSN IQQARKVPGV ENSTTRP00000013937/1-620 RNEEATKHLE CTKQLAAAFH EEFVVREDLM GLAIGTHGSN IQQARKVPGV bmy_16092T0/1-652 RNEEATKHL- ---------- ---------- ---------- ---------- ENSBTAP00000021880/1-621 RNEEATKHLE CTKQLAAAFH EEFVVREDLM GLAIGTHGSN IQQARKVPGV 251 300 BACU016598/1-663 TAIELDEDTG TFRIYGESAD AVKKARGFLE FVEDFIQVPR NLVGKVIGKN ENSP00000350170/1-621 TAIELDEDTG TFRIYGESAD AVKKARGFLE FVEDFIQVPR NLVGKVIGKN ENSTTRP00000013937/1-620 TAIELDEDTG TFRIYGESAD AVKKARGFLE FVEDFIQVPR NLVGKVIGKN bmy_16092T0/1-652 ---------- ------ESAD AVKKARGFLE FVEDFIQVPR NLVGKVIGKN ENSBTAP00000021880/1-621 TAIELDEDTG TFRIYGESAD AVKKARGFLE FVEDFIQVPR NLVGKVIGKN 301 350 BACU016598/1-663 GKVIQEIVDK SGVVRVRIEG DNENKLPRED GMVPFVFVGT KESIGNVQVL ENSP00000350170/1-621 GKVIQEIVDK SGVVRVRIEG DNENKLPRED GMVPFVFVGT KESIGNVQVL ENSTTRP00000013937/1-620 GKVIQEIVDK SGVVRVRIEG DNENKLPRED GMVPFVFVGT KESIGNVQVL bmy_16092T0/1-652 GKVIQEIVDK SGVVRVRIEG DNENKLPRED GMVPFVFVGT KESIGNVQVL ENSBTAP00000021880/1-621 GKVIQEIVDK SGVVRVRIEG DNENKLPRED GMVPFVFVGT KESIGNVQVL 351 400 BACU016598/1-663 LEYHIAYLKE VEQLRMERLQ IDEQLRQIGM GFRPSSTRGP EKEKGYATDE ENSP00000350170/1-621 LEYHIAYLKE VEQLRMERLQ IDEQLRQI-- ---------- ---------- ENSTTRP00000013937/1-620 LEYHIAYLKE VEQLRMERLQ IDEQLRQI-- ---------- ---------- bmy_16092T0/1-652 LEYHIAYLKE VEQLRMERLQ IDEQLRQIGM GFRPSSTRGP EKEKGYATDE ENSBTAP00000021880/1-621 LEYHIAYLKE VEQLRMERLQ IDEQLRQI-- ---------- ---------- 401 450 BACU016598/1-663 STVSSVQGSR SYSGRGRGRR GPNYTSGYGT NSELSNPSET ESERKDELSD ENSP00000350170/1-621 -------GSR SYSGRGRGRR GPNYTSGYGT NSELSNPSET ESERKDELSD ENSTTRP00000013937/1-620 -------GSR SYSGRGRGRR GPNYTSGYGT NSELSNPSET ESERKDELSD bmy_16092T0/1-652 STVSSVQGSR SYSGRGRGRR GPNYTSGYGT NSELSNPSET ESERKDELSD ENSBTAP00000021880/1-621 -------GSR SYSGRGRGRR GPNYTSGYGT NSELSNPSET ESERKDELSD 451 500 BACU016598/1-663 WSLAGEDDRE SRHQRDSRRR PGGRGRSVSG GRGRGGPRGG KSSISS---- ENSP00000350170/1-621 WSLAGEDDRD SRHQRDSRRR PGGRGRSVSG GRGRGGPRGG KSSISS---- ENSTTRP00000013937/1-620 WSLAGEDDRE SRHQRDSRRR PGGRGRSVSG GRGRGGPRGG KSSISS---- bmy_16092T0/1-652 WSLAGEDDRE SRHQRDSRRR PGGRGRSVSG GRGRGGPRGG KSSISSGSLL ENSBTAP00000021880/1-621 WSLAGEDDRE SRHQRDSRRR PGGRGRSVSG GRGRGGPRGG KSSISS---- 501 550 BACU016598/1-663 --------VL KDPDSNPYSL LDNTESDQTA DTDASESHHS TNRRRRSRRR ENSP00000350170/1-621 --------VL KDPDSNPYSL LDNTESDQTA DTDASESHHS TNRRRRSRRR ENSTTRP00000013937/1-620 --------VL KDPDSNPYSL LDNTESDQTA DTDASESHHS TNRRRRSRRR bmy_16092T0/1-652 YTMSESFLVL KDPDSNPYSL LDNTESDQTA DTDASESHHS TNRRRRSRRR ENSBTAP00000021880/1-621 --------VL KDPDSNPYSL LDNTESDQTA DTDASESHHS TNRRRRSRRR 551 600 BACU016598/1-663 RTDEDAVLMD GMTESDTASV NENGL----- ---------- -----DDSEK ENSP00000350170/1-621 RTDEDAVLMD GMTESDTASV NENGL----- ---------- ---------- ENSTTRP00000013937/1-620 RTDEDAVLMD GMTESDTASV NENGL----- ---------- ---------- bmy_16092T0/1-652 RTDEDAVLMD GMTESDTASV NENGLGMNVS NYKSIFPFMV NFAITDDSEK ENSBTAP00000021880/1-621 RTDEDAVLMD GMTESDTASV NENGL----- ---------- ---------- 601 650 BACU016598/1-663 KPQRRNRSRR RRFRGQAEDR --QPAIDFIY K--EVEKVVS LWQ------- ENSP00000350170/1-621 ---------- ---------- --VTVADYIS RAESQSRQRN LPRETLAKNK ENSTTRP00000013937/1-620 ---------- ---------- --VTVADYIS RAESQSRQRN LPRETLAKNK bmy_16092T0/1-652 KPQRRNRSRR RRFRGQAEDR QPVTVADYIS RAESQSRQRN LPRETLAKNK ENSBTAP00000021880/1-621 ---------- ---------- --VTVADYIS RAESQSRQRN LPRETLAKNK 651 700 BACU016598/1-663 ---AKDVIEE HGPSEKAING PTSASGDEIS KLQRTPGEEK INTLKEENTQ ENSP00000350170/1-621 KEMAKDVIEE HGPSEKAING PTSASGDDIS KLQRTPGEEK INTLKEENTQ ENSTTRP00000013937/1-620 KEMAKDVIEE HGPSEKAING PTSASGDEIS KLQRTPGEEK INTLKEENTQ bmy_16092T0/1-652 KEMAKDVIEE HGPSEKAING PTSASGDEIS KLQRTPGEEK INTLKEENTQ ENSBTAP00000021880/1-621 KEMAKDVIEE HGPSEKAING PTSASGDEIS KLQRTPGEEK INTLKEENTQ 701 750 BACU016598/1-663 EAAVLNGVS ENSP00000350170/1-621 EAAVLNGVS ENSTTRP00000013937/1-620 EAAVLNGVS bmy_16092T0/1-652 EAAVLNGVS ENSBTAP00000021880/1-621 DAAVLNGVS