KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:41 2014 Check: 00 .. Name: ENSP00000288050/1-879 Len: 1211 Check: 995 Weight: 1.00 Name: BACU018187/1-1198 Len: 1211 Check: 4706 Weight: 1.00 Name: ENSBTAP00000021895/1-878 Len: 1211 Check: 175 Weight: 1.00 Name: ENSTTRP00000000316/1-260 Len: 1211 Check: 8699 Weight: 1.00 Name: bmy_14552T0/1-878 Len: 1211 Check: 489 Weight: 1.00 // 1 50 ENSP00000288050/1-879 MMF------- ---------- ---------- ---------- ---------- BACU018187/1-1198 -MMDPELDYT LMRVCKQMIK RFCPEADSKT MLQCLKQNKN SELMDPKCKQ ENSBTAP00000021895/1-878 -ML------- ---------- ---------- ---------- ---------- ENSTTRP00000000316/1-260 -ML------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 -MF------- ---------- ---------- ---------- ---------- 51 100 ENSP00000288050/1-879 ---------- --YRLLSIVG R------QRA SPG------- ---------- BACU018187/1-1198 MITKRQITQN TDYRLNPVLR KACKADIPKF CHGILTKAKD DSELEGQVIS ENSBTAP00000021895/1-878 ---------- --PRLLAVVR G------PGS CRG------- ---------- ENSTTRP00000000316/1-260 ---------- --YQLLSVVR R------PRS SRG------- ---------- bmy_14552T0/1-878 ---------- --YWLLSVIR R------PRS SRG------- ---------- 101 150 ENSP00000288050/1-879 ---------- ---------- ---------- ---------- ---------- BACU018187/1-1198 CLKLRYADQR LSSDCEDQIR IIIQESALDY RLDPQLQLHC SDEIASLCAE ENSBTAP00000021895/1-878 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000288050/1-879 ---------- ---------- ---------- ---------- ---------- BACU018187/1-1198 EAAAQEQTGQ VEECLKVNLL KIKTEMCKKE VLNMLKESKA DIFVDPVLHT ENSBTAP00000021895/1-878 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000288050/1-879 ---------- ---------- ---------- ---------- ------WQNW BACU018187/1-1198 ACALDIKHHC AAITPGRGRQ MSCLMEALED KRVRLQPECK KRLNDRIEMW ENSBTAP00000021895/1-878 ---------- ---------- ---------- ---------- ------WREG ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ------WQKW bmy_14552T0/1-878 ---------- ---------- ---------- ---------- ------WQKW 251 300 ENSP00000288050/1-879 SSARNSTSAA EARSMAL--- --PTQAQV-- VICGG----- --GITG---- BACU018187/1-1198 SYAAKVAPAD GFSDLAMQVM TSPSKNYILS VISGSICILF LIGLMCGRIT ENSBTAP00000021895/1-878 SPARGSASAT VAPPVAL--- --PAQAQV-- VVCGG----- --GIMG---- ENSTTRP00000000316/1-260 SSARSGASAA KAHSVAL--- --PAQAQV-- VICGG----- --GIMG---- bmy_14552T0/1-878 SSARSGASAA KAHSVAL--- --PAQAQV-- VICGG----- --GIMG---- 301 350 ENSP00000288050/1-879 ---------- ------TSVA YHLSK----- ---------- ---------- BACU018187/1-1198 KRVTRELKDS AQFVQPSCIA YPLTSSFCEV TPTPMLTAAG MEGGGQTQVP ENSBTAP00000021895/1-878 ---------- ------TSVA YHLSK----- ---------- ---------- ENSTTRP00000000316/1-260 ---------- ------TSVA YHLSK----- ---------- ---------- bmy_14552T0/1-878 ---------- ------TSVA YHLSK----- ---------- ---------- 351 400 ENSP00000288050/1-879 ---------- ---------- ---------- -MG---WKDI VLLEQGRLAA BACU018187/1-1198 LSSAAVPQPL PTEPPPYCLS VSLSKGRLCF LMGPKKWAAV SLTAQ-WLAA ENSBTAP00000021895/1-878 ---------- ---------- ---------- -MG---WKDV VLLEQGRLAA ENSTTRP00000000316/1-260 ---------- ---------- ---------- -MG---WKDI VLLEQGRLAA bmy_14552T0/1-878 ---------- ---------- ---------- -MG---WKDI VLLEQGRLAA 401 450 ENSP00000288050/1-879 GSTRFCAGIL STARHLTIEQ KMADYSNKLY YQLEQETGIQ TGYTRTGSIF BACU018187/1-1198 GSTRFCAGIL STARHLTIEQ KMADYSNKLY HQLEQETGIH TGYIRTGSIF ENSBTAP00000021895/1-878 GSTRFCAGIL STARHLAIEQ KMADYSNKLY HQLEQETGIQ TGYTRTGSIF ENSTTRP00000000316/1-260 GSTRFCAGIL STARHLTIEQ KMADYSNKLY HQLEQETGIH TGYIRTGSIF bmy_14552T0/1-878 GSTRFCAGIL STARHLTIEQ KMADYSNKLY HQLEQETGIH TGYIRTGSIF 451 500 ENSP00000288050/1-879 LAQTQDRLIS LKRINAGLNV IGIPSEIISP KKVAELHHLL NVHDLVGAMH BACU018187/1-1198 LAQTQDRLIS LKRINSRLNV IGIPSEIISP KKVAELHPLL NVHDLVGAMH ENSBTAP00000021895/1-878 LAQTQDRLIS LKRINSRLNV IGIPCEIISP KKVAELHPLL NVHDLVGAMH ENSTTRP00000000316/1-260 LAQTQDRLIS LKRINSRLNV IGIPSEIISP KKVAELHPLL NVHDLVGAMH bmy_14552T0/1-878 LAQTQDRLIS LKRINSRLNV IGIPSEIISP KKVAELHPLL NVHDLVGAMH 501 550 ENSP00000288050/1-879 VPEDAVVSSA DVALALASAA SQN------- ----GVQIYD RTSVLHVMVK BACU018187/1-1198 VPEDAVVSSA DVALALASAA SQN------- ----GVQIYD RTTILHVMVR ENSBTAP00000021895/1-878 VPEDAVVSSA DVALALASAA SQS------- ----GVQIYD RTSILHVMVK ENSTTRP00000000316/1-260 VPEDAVVSSA DVALALASAA SQNGKHGVIF MIGTGVQIYD RTSILHVMVR bmy_14552T0/1-878 VPEDAVVSSA DVALALASAA SQN------- ----GVQIYD RTSILHVMVR 551 600 ENSP00000288050/1-879 KGQVTGVETD KGQIECQYFV NCAGQWAYEL GLSNEEPVSI PLHACEHFYL BACU018187/1-1198 KGQVTGVETD KGQIQCHYFV NCAGQWAYEL GLSNEEPVSI PLHACEHFYL ENSBTAP00000021895/1-878 KGQVAGVETD KGQIQCQYFV NCAGQWAYEL GLCSEEPVSI PLHACEHFYL ENSTTRP00000000316/1-260 KGQVTGVETD KGQIQCHYFV NCAGQ----- ---------- ---------- bmy_14552T0/1-878 KGQVTGVETD KGQIQCHYFV NCAGQWAYEL GLSNEEPVSI PLHACEHFYL 601 650 ENSP00000288050/1-879 LTRPLETPLQ SSTPTIVDAD GRIYIRNWQG GILSGGFEKN PKPIFTEGKN BACU018187/1-1198 LTRPWETPLQ SNTPTIVDAD GRIYIRNWQG GILSGGFEKN PKPIFTEGKN ENSBTAP00000021895/1-878 LTRPWETPLP SSTPTVVDAD GRIYIRNWQG GILSGGFEKN PKPIFTEGKN ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 LTRPWETPLQ SNTPTIVDAD GRIYIRNWQG GILSGGFEKN PKPIFTEGKN 651 700 ENSP00000288050/1-879 QLEIQNLQED WDHFEPLLSS LLRRMPELET LEIMKLVNCP ETFTPDMRCI BACU018187/1-1198 QLEIQNLQED WDHFEPLLSS LLRRMPELET LEIMKLVNCP ETFTPDMRCI ENSBTAP00000021895/1-878 QLEIQNLQED WDHFEPLLSS LLRRMPQLET LEIVKLVNCP ETFTPDMRCI ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 QLEIQNLQED WDHFEPLLSS LLRRMPELET LEIMKLVNCP ETFTPDMRCI 701 750 ENSP00000288050/1-879 MGESPAVQGY FVLAGMNSAG LSFGGGAGKY LAEWMVHGYP SENVWELDLK BACU018187/1-1198 MGESPSVRGY FVLAGMNSAG LSFGGGAGRY LAEWMVHGYP SESVWELDLK ENSBTAP00000021895/1-878 MGESPSVRGY FVLVGMNSAG LSFGGGAGKY LAEWMVYGYP SENVWELDLK ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 MGESPSVRGY FVLAGMNSAG LSFGGGAGRY LAEWMVHGYP SESVWELDLK 751 800 ENSP00000288050/1-879 RFGALQSSRT FLRHRVMEVM PLMYDLKVPR WDFQTGRQLR TSPLYDRLDA BACU018187/1-1198 RFGALQSSRT FLRHRVMEVM PLLYDLKVPR WDFQTGRQLR TSPLYDRLDA ENSBTAP00000021895/1-878 RFGALQSSRT FLRHRVMEVM PLLYDLKVPR WDFQTGRQLR TSPLYDRLDA ENSTTRP00000000316/1-260 ---------- ---------- ---------- ----VGR--- ---------- bmy_14552T0/1-878 RFGALQSSRT FLRHRVMEVM PLLYDLKVPR WDFQTGRQLR TSPLYDRLDA 801 850 ENSP00000288050/1-879 QGARWMEKHG FERPKYFVPP DKDLLALEQS KTFYKPDWFD IVESEVKCCK BACU018187/1-1198 QGARWMEKHG FERPKYFVPP DKDLLALEQS KTFYKPDWFE IVESEVKCCK ENSBTAP00000021895/1-878 QGARWMEKHG FERPKYFIPP DKDLLALEQS KTFYKPDWFE IVESEVKCCK ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 QGARWMEKHG FERPKYFVPP DKDLLALEQS KTFYKPDWFE IVESEVKCCK 851 900 ENSP00000288050/1-879 EAVCVIDMSS FTKFEITSTG DQALEVLQYL FSNDLDVPVG HIVHTGMLNE BACU018187/1-1198 EAVCVIDMSS FTKFEITSTG DQALEILQYL FSNDLDVPVG HIVHTGMLNE ENSBTAP00000021895/1-878 EAVCVIDMSS FTKFEITSTG DQALEILQYL FSNDLDVPVG HIVHTGMLNE ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 EAVCVIDMSS FTKFEITSTG DQALEILQYL FSNDLDVPVG HIVHTGMLNE 901 950 ENSP00000288050/1-879 GGGYENDCSI ARLNKRSFFM ISPTDQQVHC WAWLKKHMPK DSNLLLEDVT BACU018187/1-1198 GGGYENDCSI ARLSKRSFFM ISPTDQQVHC WAWLKKYMPE DSNLILEDVT ENSBTAP00000021895/1-878 RGGYENDCSI ARLSKRSFFM ISPTDQQVHC WAWLKKYMPE DSNLILEDVT ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 GGGYENDCSI ARLSKRSFFM ISPTDQQVHC WAWLKKYMPE DSNLILEDVT 951 1000 ENSP00000288050/1-879 WKYTALNLIG PRAVDVLSEL SYAPMTPDHF PSLFCKEMSV GYANGIRVMS BACU018187/1-1198 WKYTALNLIG PRAVDVLSEL SYAPMTPDHF PSLFCKEMSV GYANGIRVMS ENSBTAP00000021895/1-878 WKYTALNLIG PRAVDVLSEL SYAPMTPDHF PSLFCKEMSV GYANGIRVMS ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 WKYTALNLIG PRAVDVLSEL SYAPMTPDHF PSLFCKEMSV GYANGIRVMS 1001 1050 ENSP00000288050/1-879 MTHTGEPGFM LYIPIEYALH VYNEVMSVGQ KYGIRNAGYY ALRSLRIEKF BACU018187/1-1198 MTHTGEPGFM LYIPIEYALH VYNEVMSVGQ KYGIRNAGYY ALRSLRIEKF ENSBTAP00000021895/1-878 MTHTGEPGFM LYIPIEYALH VYNEVMSVGQ KYGIRNAGYY ALRSLRIEKF ENSTTRP00000000316/1-260 ------PG-- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 MTHTGEPGFM LYIPIEYALH VYNEVMSVGQ KYGIRNAGYY ALRSLRIEKF 1051 1100 ENSP00000288050/1-879 FAFWGQDINN LTTPLECGRE SRVKLEKGMD FIGRDALLQQ KQNGVYKRLT BACU018187/1-1198 FAFWGQDLNT LTTPLECGRE SRVKLDKGMD FIGRDALLQQ KQNGVYKRLT ENSBTAP00000021895/1-878 FAFWGQDLNT LTTPLECGGE SRVKLDKGVD FIGRDALLQQ RQNGVYKRLT ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 FAFWGQDLNT LTTPLECGRE SRVKLDKGMD FIGRDALLQQ KQNGVYKRLT 1101 1150 ENSP00000288050/1-879 MFILDDHDSD LDLWPWWGEP IYRNGQYVGK TTSSAYSYSL ERHVCLGFVH BACU018187/1-1198 MFILDDHDTD LDLWPWWGEP IYRNGQYVGK TTSSAYGYTL ERHVCLGFVH ENSBTAP00000021895/1-878 MFILDDHDTD LDLWPWWGEP IYRNGRYVGK TTSSAYGYTL ERHVCLGFVH ENSTTRP00000000316/1-260 ---------- ------WA-- ---------- ---------- ---------- bmy_14552T0/1-878 MFILDDHDTD LDLWPWWGEP IYRNGQYVGK TTSSAYGYTL ERHVCLGFVH 1151 1200 ENSP00000288050/1-879 NFSEDTGEEQ VVTADFINRG EYEIDIAGYR FQAKAKLYPV ASLFTQKRRK BACU018187/1-1198 NFSEDTGEEQ VVTADFINRG EYEIDIAGQR FQAKAKLYPV TSLFTHKRRK ENSBTAP00000021895/1-878 NFSEDTGEEQ VVTADFINRG EYEIDIAGHR FQAKAKLYPV PSLLTHKRRK ENSTTRP00000000316/1-260 ---------- ---------- ---------- ---------- ---------- bmy_14552T0/1-878 NFSEDTGEEQ VVTADFINRG EYEIDIAGHR FQAKAKLYPV TSLFTHKRRK 1201 1250 ENSP00000288050/1-879 DDMELSDLHG K BACU018187/1-1198 DDVELSDLHG K ENSBTAP00000021895/1-878 EDVELSDLHG K ENSTTRP00000000316/1-260 ---------- - bmy_14552T0/1-878 DDVELSDLHG K