KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:44 2014 Check: 00 .. Name: ENSP00000064780/1-430 Len: 443 Check: 5052 Weight: 1.00 Name: bmy_03684T0/1-358 Len: 443 Check: 6458 Weight: 1.00 Name: ENSBTAP00000021927/1-437 Len: 443 Check: 8132 Weight: 1.00 Name: BACU004972/1-433 Len: 443 Check: 2015 Weight: 1.00 Name: ENSTTRP00000004360/1-429 Len: 443 Check: 3384 Weight: 1.00 // 1 50 ENSP00000064780/1-430 -------MKP SLLCR---PL SCFLM--LLP WPLATLTSTT LWQCPPGEEP bmy_03684T0/1-358 --------MP CLSAFRSLSV SCPLFFQLLP WPLATATSTT PWPCPPGKEP ENSBTAP00000021927/1-437 STRWGLRMKL SPPPW---SL SCLLV--LLP WPLATATPTA PRQCPPGQEP BACU004972/1-433 --------MP CPSAFRSLSV SCPLFFQLLP WPLATATSTT PWPCPPGEEP ENSTTRP00000004360/1-429 -------MKL SPPHW---PL SCLLV--LLP WPLATATSTT PWPCPPGEEP 51 100 ENSP00000064780/1-430 DLDPGQGTLC RP-CPPGTFS AAWGSSPCQP HARCSLWRRL EAQVGMATRD bmy_03684T0/1-358 NL-----VVC PIRGPPCSLS SVLLDTPG-- ------YSRL ---------- ENSBTAP00000021927/1-437 NLEPGWGTLC RS-CPPGTFS ASWGSRPCQP HSRCSPRGRL EAQVGTATQD BACU004972/1-433 NLEPGQGTLC RS-CPPGTFS ASWGSSPCQP HSRCSPRGRL EAQVGTATRD ENSTTRP00000004360/1-429 NLEPGRGTLC RS-CPPGTFS ASWGSSPCQP HSRCSPQGRL EAQVGTATRD 101 150 ENSP00000064780/1-430 TLCGDCWPGW FGPWGVPRVP CQPCSWAPLG THGCDEWGRR ARRGVEVAAG bmy_03684T0/1-358 -LRGGQRPQG LAILRAEEAL LRLADWSD-G QKGG-ERGRR ARRGVEVAAG ENSBTAP00000021927/1-437 ALCGDCQPGW FSPAEAPGVP CWPCSRTPLG GRSCFKRGRR ARRGVEVAAG BACU004972/1-433 TLCGNCQPGW FAPSEVPRVP CQPCSWTPLG TRGCYERGRR ARRGVEVAAG ENSTTRP00000004360/1-429 TLCGNCQPGW FAPSEVPHVP CRPCSWTPLG TRGCYERGRR ARRGMEVAAR 151 200 ENSP00000064780/1-430 ASSGGETRQP GNGTRAGGPE ETAAQYAVIA IVPVFCLMGL LGILVCNLLK bmy_03684T0/1-358 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK ENSBTAP00000021927/1-437 AGGAAETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK BACU004972/1-433 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK ENSTTRP00000004360/1-429 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK 201 250 ENSP00000064780/1-430 RKGYHCTAHK EVGPGPGGGG SGINPAYRTE DANEDTIGVL VRLITEKKEN bmy_03684T0/1-358 RKGYHCTAHK EVGPGPGGGG SGVNPAYQTE DANEDTIGVL VRLITEKKEN ENSBTAP00000021927/1-437 RKGYHCTAQK EVGPGPGGGG SGTNPACRPE DASEDTIGVL VRLITEKKEN BACU004972/1-433 RKGYHCTAHK EVGPGPGGGG SGVNPAYQTE DTNEDTIGVL VRLITEKKEN ENSTTRP00000004360/1-429 RKGYHCTAHK EVGPGPGGGG SGVNPAYHTD DANEDTIGVL VRLITEKKEN 251 300 ENSP00000064780/1-430 AAALEELLKE YHSKQLVQTS HRPVSKLPPA PPNVPHICPH RHHLHTVQGL bmy_03684T0/1-358 AAALEELLKE YHSKQLAQTS HRPLPRLPPG PPSMPHVCPH RHHLHTVQGL ENSBTAP00000021927/1-437 AAALEELLKE YHSRQLVQTS HRPLPRLPPG PPSMPHVCPH RQHLHTVQGL BACU004972/1-433 AAALEELLKE YHSKQLAQTS HRPLPRLPPG PPSIPHVCPH RHHLHTVQDL ENSTTRP00000004360/1-429 AAALEELLKE YHSKQLVQTS HRPLPRLPPG PPSMPHVCPH RHHLHTVQGL 301 350 ENSP00000064780/1-430 ASLSGPCCSR CSQKKWPEVL LSPEAVAATT PVPSLLPNPT RVPKAGAKAG bmy_03684T0/1-358 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RAPKVGAKAG ENSBTAP00000021927/1-437 ASLSGPCCSR CSQKKWPEVL LSPEAAAATT PAPRLLPNPA RTPKAGAKAG BACU004972/1-433 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RAPKVGAKAG ENSTTRP00000004360/1-429 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RVPKVGAKAG 351 400 ENSP00000064780/1-430 RQGEITILSV GRFRVARIPE QRTSSMVSEV KTITEAGPSW GDLPDSPQPG bmy_03684T0/1-358 RQGEITILSV GR-------- ---------- ---------- ---------- ENSBTAP00000021927/1-437 RQGEITILSV GRFRVARIPE QRVSSVASEV KTITEAGPSG GELPNSPRPG BACU004972/1-433 RQGEITILSV GRFRVARIPE QRTSSVASEV KTITEARPSG GDLPDSPQCG ENSTTRP00000004360/1-429 RQGEITILSV GRFRVARIPE QRMSSVASEV KTITEAGPSG GDLPDSPRRG 401 450 ENSP00000064780/1-430 LPPEQQALLG SGGSRTKWLK PPAENKAEEN RYVVRLSESN LVI bmy_03684T0/1-358 ---EQWALLG SGGSHPKWLK PPAENKAE-- --VCPFSE-- --- ENSBTAP00000021927/1-437 LPSEQRALLG SGGSHAKWPK PPAENKAEEN RYVVRLSESN LVI BACU004972/1-433 LSSEQRALLG SGGSHPKWLK PPAENKAEEN RYVVRLSESN LVI ENSTTRP00000004360/1-429 LSSEQQTLLG SGGSHPKWLK SPAENKAEEN RYVVRLSESN LVI