KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:15:44 2014 Check: 00 ..
Name: ENSP00000064780/1-430 Len: 443 Check: 5052 Weight: 1.00
Name: bmy_03684T0/1-358 Len: 443 Check: 6458 Weight: 1.00
Name: ENSBTAP00000021927/1-437 Len: 443 Check: 8132 Weight: 1.00
Name: BACU004972/1-433 Len: 443 Check: 2015 Weight: 1.00
Name: ENSTTRP00000004360/1-429 Len: 443 Check: 3384 Weight: 1.00
//
1 50
ENSP00000064780/1-430 -------MKP SLLCR---PL SCFLM--LLP WPLATLTSTT LWQCPPGEEP
bmy_03684T0/1-358 --------MP CLSAFRSLSV SCPLFFQLLP WPLATATSTT PWPCPPGKEP
ENSBTAP00000021927/1-437 STRWGLRMKL SPPPW---SL SCLLV--LLP WPLATATPTA PRQCPPGQEP
BACU004972/1-433 --------MP CPSAFRSLSV SCPLFFQLLP WPLATATSTT PWPCPPGEEP
ENSTTRP00000004360/1-429 -------MKL SPPHW---PL SCLLV--LLP WPLATATSTT PWPCPPGEEP
51 100
ENSP00000064780/1-430 DLDPGQGTLC RP-CPPGTFS AAWGSSPCQP HARCSLWRRL EAQVGMATRD
bmy_03684T0/1-358 NL-----VVC PIRGPPCSLS SVLLDTPG-- ------YSRL ----------
ENSBTAP00000021927/1-437 NLEPGWGTLC RS-CPPGTFS ASWGSRPCQP HSRCSPRGRL EAQVGTATQD
BACU004972/1-433 NLEPGQGTLC RS-CPPGTFS ASWGSSPCQP HSRCSPRGRL EAQVGTATRD
ENSTTRP00000004360/1-429 NLEPGRGTLC RS-CPPGTFS ASWGSSPCQP HSRCSPQGRL EAQVGTATRD
101 150
ENSP00000064780/1-430 TLCGDCWPGW FGPWGVPRVP CQPCSWAPLG THGCDEWGRR ARRGVEVAAG
bmy_03684T0/1-358 -LRGGQRPQG LAILRAEEAL LRLADWSD-G QKGG-ERGRR ARRGVEVAAG
ENSBTAP00000021927/1-437 ALCGDCQPGW FSPAEAPGVP CWPCSRTPLG GRSCFKRGRR ARRGVEVAAG
BACU004972/1-433 TLCGNCQPGW FAPSEVPRVP CQPCSWTPLG TRGCYERGRR ARRGVEVAAG
ENSTTRP00000004360/1-429 TLCGNCQPGW FAPSEVPHVP CRPCSWTPLG TRGCYERGRR ARRGMEVAAR
151 200
ENSP00000064780/1-430 ASSGGETRQP GNGTRAGGPE ETAAQYAVIA IVPVFCLMGL LGILVCNLLK
bmy_03684T0/1-358 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK
ENSBTAP00000021927/1-437 AGGAAETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK
BACU004972/1-433 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK
ENSTTRP00000004360/1-429 ASGAGETRQP GNSTRAGSPE ETAAQYAVIA IVPIFCLMGL LGILVCNLLK
201 250
ENSP00000064780/1-430 RKGYHCTAHK EVGPGPGGGG SGINPAYRTE DANEDTIGVL VRLITEKKEN
bmy_03684T0/1-358 RKGYHCTAHK EVGPGPGGGG SGVNPAYQTE DANEDTIGVL VRLITEKKEN
ENSBTAP00000021927/1-437 RKGYHCTAQK EVGPGPGGGG SGTNPACRPE DASEDTIGVL VRLITEKKEN
BACU004972/1-433 RKGYHCTAHK EVGPGPGGGG SGVNPAYQTE DTNEDTIGVL VRLITEKKEN
ENSTTRP00000004360/1-429 RKGYHCTAHK EVGPGPGGGG SGVNPAYHTD DANEDTIGVL VRLITEKKEN
251 300
ENSP00000064780/1-430 AAALEELLKE YHSKQLVQTS HRPVSKLPPA PPNVPHICPH RHHLHTVQGL
bmy_03684T0/1-358 AAALEELLKE YHSKQLAQTS HRPLPRLPPG PPSMPHVCPH RHHLHTVQGL
ENSBTAP00000021927/1-437 AAALEELLKE YHSRQLVQTS HRPLPRLPPG PPSMPHVCPH RQHLHTVQGL
BACU004972/1-433 AAALEELLKE YHSKQLAQTS HRPLPRLPPG PPSIPHVCPH RHHLHTVQDL
ENSTTRP00000004360/1-429 AAALEELLKE YHSKQLVQTS HRPLPRLPPG PPSMPHVCPH RHHLHTVQGL
301 350
ENSP00000064780/1-430 ASLSGPCCSR CSQKKWPEVL LSPEAVAATT PVPSLLPNPT RVPKAGAKAG
bmy_03684T0/1-358 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RAPKVGAKAG
ENSBTAP00000021927/1-437 ASLSGPCCSR CSQKKWPEVL LSPEAAAATT PAPRLLPNPA RTPKAGAKAG
BACU004972/1-433 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RAPKVGAKAG
ENSTTRP00000004360/1-429 ASLSGPCCSR CSQ-KWPEVL LSPEAAAATT PTPRLLPNPA RVPKVGAKAG
351 400
ENSP00000064780/1-430 RQGEITILSV GRFRVARIPE QRTSSMVSEV KTITEAGPSW GDLPDSPQPG
bmy_03684T0/1-358 RQGEITILSV GR-------- ---------- ---------- ----------
ENSBTAP00000021927/1-437 RQGEITILSV GRFRVARIPE QRVSSVASEV KTITEAGPSG GELPNSPRPG
BACU004972/1-433 RQGEITILSV GRFRVARIPE QRTSSVASEV KTITEARPSG GDLPDSPQCG
ENSTTRP00000004360/1-429 RQGEITILSV GRFRVARIPE QRMSSVASEV KTITEAGPSG GDLPDSPRRG
401 450
ENSP00000064780/1-430 LPPEQQALLG SGGSRTKWLK PPAENKAEEN RYVVRLSESN LVI
bmy_03684T0/1-358 ---EQWALLG SGGSHPKWLK PPAENKAE-- --VCPFSE-- ---
ENSBTAP00000021927/1-437 LPSEQRALLG SGGSHAKWPK PPAENKAEEN RYVVRLSESN LVI
BACU004972/1-433 LSSEQRALLG SGGSHPKWLK PPAENKAEEN RYVVRLSESN LVI
ENSTTRP00000004360/1-429 LSSEQQTLLG SGGSHPKWLK SPAENKAEEN RYVVRLSESN LVI