KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:45 2014 Check: 00 .. Name: bmy_03685T0/1-238 Len: 298 Check: 8264 Weight: 1.00 Name: ENSBTAP00000021930/1-226 Len: 298 Check: 3601 Weight: 1.00 Name: ENSP00000348852/1-235 Len: 298 Check: 9602 Weight: 1.00 Name: ENSTTRP00000004321/1-207 Len: 298 Check: 9316 Weight: 1.00 // 1 50 bmy_03685T0/1-238 ---------- -----MELFC LFIGYPTAYP AAAPAYNPSL YPTNSPSYAP ENSBTAP00000021930/1-226 ---------- ---------- -FIGYPTAYP AAAPAYNPSL YPTNSPSYAP ENSP00000348852/1-235 MNPVYSPVQP GAPYGNPKNM AYTGYPTAYP AAAPAYNPSL YPTNSPSYAP ENSTTRP00000004321/1-207 MNPVYSPVQP GAPYGNPKNM AYTGYPTAYP AAAPAYNPSL YPTNSPSYAP 51 100 bmy_03685T0/1-238 GKEKVKTAVS FSSCIQLMVG NLYRHMAAEF KQTSEQKFLG LYGSSVGFMA ENSBTAP00000021930/1-226 EFQFLHSAY- ---------- ---------- ---------- ---------- ENSP00000348852/1-235 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004321/1-207 EFQFLHSAY- ---------- ---------- ---------- ---------- 101 150 bmy_03685T0/1-238 APAEEYLDYA STLLMKQAWP QNSSSCGTEG TFHLPVDTGT ENRTYQASSA ENSBTAP00000021930/1-226 ---------- ATLLMKQAWP QNSSSCGTEG TFHLPVDTGT ENRTYQASSA ENSP00000348852/1-235 ---------- ATLLMKQAWP QNSSSCGTEG TFHLPVDTGT ENRTYQASSA ENSTTRP00000004321/1-207 ---------- ATLLMKQAWP QNSSSCGTEG TFHLPVDTGT ENRTYQASSA 151 200 bmy_03685T0/1-238 AFRYTAGTPY KVPPTQSNTA PPPYSPSPNP YQTAMYPIRS AYPQQNLYAQ ENSBTAP00000021930/1-226 AFRYTAGTPY KVPPTQSNTA PPPYSPSPNP YQTAMYPIRS AYPQQNLYAQ ENSP00000348852/1-235 AFRYTAGTPY KVPPTQSNTA PPPYSPSPNP YQTAMYPIRS AYPQQNLYAQ ENSTTRP00000004321/1-207 AFRYTAGTPY KVPPTQSNTA PPPYSPSPNP YQTAMYPIRS AYPQQNLYAQ 201 250 bmy_03685T0/1-238 ---VSRPV-- ---------- ---------- ---------- ---------- ENSBTAP00000021930/1-226 GAYYTQPVYA AQPHVIHHTT VVQPNSIPSA IYPAPVAAPR TNGVAMGMVA ENSP00000348852/1-235 GAYYTQPVYA AQPHVIHHTT VVQPNSIPSA IYPAPVAAPR TNGVAMGMVA ENSTTRP00000004321/1-207 GAYYTQPVYA AQPHVIHHTT VVQPNSIPSA IYPAPVAAPR TNGVAMGMVA 251 300 bmy_03685T0/1-238 GCDSTKQSCD PGTLLTAPQH TAIGAHPVSM PAYRAQGTPA YSYVPPHW ENSBTAP00000021930/1-226 GTTMAMSAGC SGTLLTAPQH TAIGAHPVSM PTYRAQGTPA YSYVPPHW ENSP00000348852/1-235 GTTMAMSA-- -GTLLTTPQH TAIGAHPVSM PTYRAQGTPA YSYVPPHW ENSTTRP00000004321/1-207 GTTMAMSA-- ---------- ---------- ---------- --------