KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:45 2014 Check: 00 .. Name: ENSP00000356548/1-475 Len: 601 Check: 1415 Weight: 1.00 Name: bmy_02152T0/1-341 Len: 601 Check: 4771 Weight: 1.00 Name: BACU003659/1-599 Len: 601 Check: 6807 Weight: 1.00 Name: ENSTTRP00000008329/1-475 Len: 601 Check: 4059 Weight: 1.00 Name: ENSBTAP00000021934/1-475 Len: 601 Check: 2429 Weight: 1.00 // 1 50 ENSP00000356548/1-475 ---------- ---------- ---------- ---------- ---------- bmy_02152T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003659/1-599 MILLLKKSHD LCYPCGHRGW GMWVTHRSGP RAAIRKELNE FKSTEMEVHE ENSTTRP00000008329/1-475 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021934/1-475 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000356548/1-475 ---------- ---------- ---------- ---------- ---------- bmy_02152T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003659/1-599 ESRQFTSALI ASDLLNFIKF DKTLCGTSTQ TWRGVAATST AVQTTQVLVR ENSTTRP00000008329/1-475 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000021934/1-475 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000356548/1-475 MPHRKKKPFI EKKKAVSFHL VHRSQRDPLA ADESAPQRVL LPTQKIDNEE bmy_02152T0/1-341 MPHRKKKPFI EKKKAVSFHL VHRSQRDPLA ADETAPQRVL LPTQKIKDEE BACU003659/1-599 FPHRKKKPFI EKKKAVSFHL VHRSQRDPLA ADETAPQRVL LPTQKIKDEE ENSTTRP00000008329/1-475 MPHRKKKPFI EKKKAVSFHL VHRSQRDPLA ADETAPQRVL LPTQKIKDEE ENSBTAP00000021934/1-475 MPHRKKKPFI EKKKAVSFHL VHRSQRDPLA ADETAPQRVL LPTQKIKDEE 151 200 ENSP00000356548/1-475 RRAEQRKYGV FFDDDYDYLQ HLKEPSGPSE LIPSSTFSAH NRREEKEETL bmy_02152T0/1-341 RRAEQRKYGV FFDDDYDYLQ HLKEPSGPSE LVPTDTCGAP YREDEKEEAL BACU003659/1-599 RRAEQRKYGV FFDDDYDYLQ HLREPSGPSE LVPTDTCGAP YREDEKEEAL ENSTTRP00000008329/1-475 RRAEQRKYGV FFDDDYDYLQ HLKEPSGPSE LIPTNTFGVP YREDEKEEPL ENSBTAP00000021934/1-475 RRAEQRKYGV FFDDDYDYLQ HLKEPSGPSE LIPTSPFGAP YRGDGREEPL 201 250 ENSP00000356548/1-475 VIPSTGIKLP SSVFASEFEE DVGLLNKAAP VSGPRLDFDP DIVAALDDDF bmy_02152T0/1-341 ATSTTGIKLP SSVFASEFEE DVGLLNKAAP VSGPRLDFDP DIVAALDDDF BACU003659/1-599 ATSTTGIKLP SSVFASEFEE DVGLLNKAAP VSGPRLDFDP DIVAALDDDF ENSTTRP00000008329/1-475 ATSTTGIKLP SSVFASEFEE DVGLLNKAAP VSGPRLDFDP DIVAGLDDDF ENSBTAP00000021934/1-475 ATSTSGIKLP SSVFASEFEE DVGLLNKAAP VSGPRLDFDP DIVAALDDDF 251 300 ENSP00000356548/1-475 DFDDPDNLLE DDFILQANKA TGEEEGMDIQ KSENEDDSEW EDVDDEK--G bmy_02152T0/1-341 DFDNPDNLLE DDFILQANKP TEEEEGMEIQ KSEAEDDSEW EDVDDEKERG BACU003659/1-599 DFDDPDNLLE DDFILQANKP TDEEEGMETQ KSEAEDDSEW EDVDDEKEGG ENSTTRP00000008329/1-475 DFDNPDNLLE DDFILRANKP TEKEEGMEIQ KSEAEDDSEW EDVDDEKEGG ENSBTAP00000021934/1-475 DFDNPDNLLE DDFILQANKP TEEEEGMEIQ KSEAEDDSEW EDVDDEKEGG 301 350 ENSP00000356548/1-475 DSNDDYDSAG LLSDEDCMSV PGKTHRAIAD HLFWSEETKS RFTEYSMTSS bmy_02152T0/1-341 SDDDKYDPAG --SSDEDMSS PGKPLGAVEN HLFWEEETKS RFTEYSLTSS BACU003659/1-599 SDDDKYDPAG --SSDEDMSS PGKPLGAVEN HFFWEEETKS RFTEYSLTSS ENSTTRP00000008329/1-475 SDDDKYDPAG --SSDEDMSY PGKPLGAVEN NLFWEEETKS RFTEYSLTSS ENSBTAP00000021934/1-475 SDDDRYDRAG --SSDEDMSA PGKPLGAIEN HFFWEEETKS RFTEYSLTSS 351 400 ENSP00000356548/1-475 VMRRNEQLTL HDERFEKFYE QYDDDEIGAL DNAELEGSIQ VDSNRLQEVL bmy_02152T0/1-341 VMRRNEQLTL HDERFEKFYE QYDDDEIGAL DNAELEGSIQ VDSNRLEEVL BACU003659/1-599 VMRRNEQLTL HDERFEKFYE QYDDDEIGAL DNAELEGSIQ VDSNRLEEVL ENSTTRP00000008329/1-475 VMRRNEQLTL HDERFEKFYE QYDDDEIGAL DNAELEGSIQ VDSNRLEDVL ENSBTAP00000021934/1-475 VMRRNEQLTL HDERFEKFYE QYDDDEIGAL DNAELEGSIQ VDSNRLEEVL 401 450 ENSP00000356548/1-475 NDYYKEKAEN CVKL-NTLEP L--------- ---------- ----EDQDLP bmy_02152T0/1-341 NDYYKEKAEK YGDF-SLITS F--------- ---------- ---------- BACU003659/1-599 NDYYKEKAEK YGDFLDYFLS FVSNKVYNRT AESRKSPSQD PCLENDQDLP ENSTTRP00000008329/1-475 NDYYKEKAEN CVKL-NTLEP F--------- ---------- ----EDQDLP ENSBTAP00000021934/1-475 NDYYKEKAEN CVKL-NTLEP F--------- ---------- ----EDQDLP 451 500 ENSP00000356548/1-475 MNELDESEEE EMITVVLEEA KEKWDCESIC STYSNLYNHP QLIKYQPKPK bmy_02152T0/1-341 ---------- ----FLFQ-- -----IKSVI APL-NLENHP ---------- BACU003659/1-599 VNELSGSEEE ETVTVVLEEA KEKWDCESIC STYSNLYNHP QLIKYQPKPK ENSTTRP00000008329/1-475 VNELSGSEEE EIVTVVLEEA KEKWDCESIC STYSNLYNHP QLIKYQPKPK ENSBTAP00000021934/1-475 VNELDGSEEE ETVTVVLEEA KEKWDCESIC STYSNVYNHP QLIKYQPKPK 501 550 ENSP00000356548/1-475 QIRISSKTGI PLNVLPKKGL TAKQTERIQM INGSDLPKVS TQPRSKNESK bmy_02152T0/1-341 ---------V KIHV------ ---------- ---------- ---------- BACU003659/1-599 QIRLSSKTGI PLNVLPKKGL TAKQVERMQM INDSDLPKVS TQPRSRSESK ENSTTRP00000008329/1-475 EIRLSSKTGI PLNVLPKKGL TAKQVEQMQM INDSDLPKVS TQPRSKNESK ENSBTAP00000021934/1-475 QIRLSSKTGI PLNVLPKKGL TAKQVERMQM INNSDLPKTS TQPRLKRESK 551 600 ENSP00000356548/1-475 EDKRARKQAI KEERKERRVE KKANKLAFKL EKRRQEKELL NLKKNVEGLK bmy_02152T0/1-341 ---------- ---------- ---------- ---------- ---------- BACU003659/1-599 EDKRARKQAI KEERKERRLE KKANKLAFKL EKRRQERELL NLKKNVEGLK ENSTTRP00000008329/1-475 EDKRARKQAI KEERKERRVE KKANKLAFKL EKRRQERELL NLKKNVEGLK ENSBTAP00000021934/1-475 EDKRARKRAI KEERKERRVE KKANKLAFKL EKRRQEKELL NLKKNVEGLK 601 650 ENSP00000356548/1-475 L bmy_02152T0/1-341 - BACU003659/1-599 L ENSTTRP00000008329/1-475 L ENSBTAP00000021934/1-475 L