KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:46 2014 Check: 00 .. Name: ENSP00000304710/1-723 Len: 772 Check: 9659 Weight: 1.00 Name: bmy_06281T0/1-649 Len: 772 Check: 3985 Weight: 1.00 Name: BACU012916/1-736 Len: 772 Check: 1199 Weight: 1.00 Name: ENSBTAP00000021939/1-706 Len: 772 Check: 6470 Weight: 1.00 // 1 50 ENSP00000304710/1-723 MSESSGSALQ PGRPSRQPAV HPENLSLDSS CFSSPPVNFL QELPSYRSIA bmy_06281T0/1-649 MENFPRMSEK EKAFLFSDGH FEKSLSLDSS CFSSPSVNFL QELPSYRSIA BACU012916/1-736 ---------- ---------- ---------- ------VNFL QELPSYRSIA ENSBTAP00000021939/1-706 ---------- ---------- YPESLSLDSS CFSSPPVNFL QELPSYRSIA 51 100 ENSP00000304710/1-723 RRRTTVHSRD KQSGTLLKPT DSYSSQLEDR IAENLSSHSL RNYALNISEK bmy_06281T0/1-649 RKRTTILSRD KQSGTLLKPT DSYSSQLEGE ITESLDNQSI RKYALNISEK BACU012916/1-736 RKRTTILSRD KQSGTLLKPT DSYSSQLEEE ITENLDSQSI RKYALNISEK ENSBTAP00000021939/1-706 RKRTTILSRD KQSGTLLKPT DSYNFQLEGE LTEDLDSQSI RKYALNISEK 101 150 ENSP00000304710/1-723 RRLRDIQETQ MKYLSEWDQW KRYSSKSWKR FLEKAREMTT HLELWREDIR bmy_06281T0/1-649 RRLRDIQETQ MKYLSEWDQW KRYSSKSWER FIEKAREMTT HLEL------ BACU012916/1-736 RRLRDIQETQ MKYLSEWDQW KRYSSKSWER FIEKAREMTT HLELWREDIR ENSBTAP00000021939/1-706 RRLRDIQETQ MKYLSEWDQW KRYSSKSWKR FIEKAREMTT HLELWREDIR 151 200 ENSP00000304710/1-723 SIEGKFGTGI QSYFSFLRFL VLLNLVIFLI IFMLVLLPVL LTKYKITNSS bmy_06281T0/1-649 --------EI RHWNSVLLLL LTVSGIAEFG DISDHLYAVL LTRYKITNSS BACU012916/1-736 SIEGKFGTGI QSYFSFLRFL VLLNLVIFLI IFMLVLLPVL LTRYKITNSS ENSBTAP00000021939/1-706 SIEGKFGTGI QSYFSFLRFL VLLNLVIFLI IFMVVLLPVL LTRYKITNSS 201 250 ENSP00000304710/1-723 FVLIPFKDMD KQCTVYPVSS SGLIYFYSYI IDLLSGTGFL EETSLFYGHY bmy_06281T0/1-649 FVLIPSKGAD IQCTVYPLSS SGLIYFYSYI IDLLSGT--- ---------- BACU012916/1-736 FVLIPSRGAD IQCTVYPISS SGLIYFYSYI IDLLSGTGFL EDTCLFYGHY ENSBTAP00000021939/1-706 FILIPSQDVD IQCTVYPISS SGLIYFYSYV IDLLSGTGFL EDTYLFYGHY 251 300 ENSP00000304710/1-723 TIDGVKFQNF T--------- ---------- ---------- ---------- bmy_06281T0/1-649 --------NF I--------- ---------- ---------- ---------- BACU012916/1-736 TIDGVKFQNF IYDLPLAYVL STVAYLALSL LWIGFLEDTC LFYGHYTIDG ENSBTAP00000021939/1-706 TIDGVKFQNF T--------- ---------- ---------- ---------- 301 350 ENSP00000304710/1-723 -------YDL PLAYLLSTIA SLALSLLWIV KRSVEGFKIN LIRSEEHFQS bmy_06281T0/1-649 -------YDL PLAYXLSTVA YLALSLLWIV KRSVEGFKSN LIRSEEHFQS BACU012916/1-736 VKFQNFIYDL PLAYVLSTVA YLALSLLWIV KRSVEGFKSN LIRSEEHFQS ENSBTAP00000021939/1-706 -------YDL PLAYLLSTIA YLALSLVWIV KRSVEGFKIN LIRSEEHFQS 351 400 ENSP00000304710/1-723 YCNKIFAGWD FCITNRSMAD LKHSSLRYEL RADLEEERMR QKIAERTSEE bmy_06281T0/1-649 YCNKIFAGWD FCITNRSMAD LRHSSLRYEL RADLEEERIR QKIAERTSEE BACU012916/1-736 YCNKIFAGWD FCITNRSMAD LRHSSLRYEL RADLEEERIR QKIAERTSEE ENSBTAP00000021939/1-706 YCNKVFAGWD FCITNRSMAD LKHSSLRYEL RADLEEERIR QKIAERTSEE 401 450 ENSP00000304710/1-723 TIRIYSLRLF LNCIVLAVLG ACFYAIYVAT VFSQEHMKKE IDKMVFGENL bmy_06281T0/1-649 TIRIYSLRLF LNCIVLAVLA ACFYAIYRAT IFSQEHMKKE IDKMVFGENL BACU012916/1-736 TIRIYSLRLF LNCIVLTVLG ACFYAIYRAT IFSQEHMKKE IDKMVFGENL ENSBTAP00000021939/1-706 TIRIYSLRLF LNCIVLAVLA ACFYAIYKAT IFSQEHMKKE IDKMVFGENL 451 500 ENSP00000304710/1-723 FILYLPSIVI TLANFITPMI FAKIIRYEDY SPGFEIRLTI LRCVFMRLAT bmy_06281T0/1-649 LIL------- ---------- ---------- ---------- --CVFMRLAT BACU012916/1-736 LILYLPSIVI TLANFITPII FAKIIHYEDY SPGFEIRLTI LRCVFMRLAT ENSBTAP00000021939/1-706 LILYLPSIVI TLANFITPII FAKIIHYEDY SPGFEIRLTI LRCVFMRLAT 501 550 ENSP00000304710/1-723 ICVLVFTLGS KITSCDDDTC DLCGYNQKLY PCWETQVGQE MYKLMIFDFI bmy_06281T0/1-649 ICVLVFTLGS KITSCDNYSC ELCGYNQKLY PCWETQVGQE MYKLMIFDLI BACU012916/1-736 ICVLVFTLGS EITSCDNYSC ELCGYNQKLY PCWETQVGQE MYKLMIFDLI ENSBTAP00000021939/1-706 ICVLVFTLGS KITSCDNYLC ELCGYNQKLY PCWETQVGQE MYKLMIFDLI 551 600 ENSP00000304710/1-723 IILAVTLFVD FPRKLLVTYC SSCKLIQCWG QQEFAIPDNV LGIVYGQTIC bmy_06281T0/1-649 IILAVTLFVD FPRKILVTYC SSWKLFRCWG QQEFAIPDNV LGIVYGQTIC BACU012916/1-736 IILAVTLFVD FPRKFLVTYC SSWKLFRCWG QQEFAIPDNV LGIVYGQTIC ENSBTAP00000021939/1-706 IILAVTLFVD FPRKILVTYC SSWKLFQCWG EQEFAIPDNV LGIVYGQTIC 601 650 ENSP00000304710/1-723 WIGAFFSPLL PAIATLKFII IFYVKEWSLL YTCRPSPRPF RASNSNFFFL bmy_06281T0/1-649 WIGAFFSPLL PAVATLKFII IFYI---SLL YTCRPSPRQF RASNSNFFFL BACU012916/1-736 WMGAFFSPLL PAVATLKFII IFYVKEISLL YTCRPSPRQF RASNSNFFFL ENSBTAP00000021939/1-706 WIGAFFSPLL PAIATLKFII IFYVKEISLL YTCRPSPRQF RASNSNFFFL 651 700 ENSP00000304710/1-723 LVLLIGLCLA IIPLTISISR IPSSKACGPF TNFNTTWEVI PKTVSTFPSS bmy_06281T0/1-649 LVLLIGLCLA XIPLTISMTR IPSSKACGPF TNFNTTWEVV PKMVSTFPSS BACU012916/1-736 LVLLIGLCLA IIPLTISMTR IPSSKACGPF TNFNTTWEVV PKMVSTFPSS ENSBTAP00000021939/1-706 LVLLIGLCLA IIPLTISMAR IPSSKACGPF TNFNTTWEVV PKTVSTFPNS 701 750 ENSP00000304710/1-723 LQSFIHGVTS EAFAVPFFMI ICLIMFYFIA LAGAHKRVVI QLREQLSLES bmy_06281T0/1-649 LQSLVHGITS EAFAVPFFMI ICLVMFYFIA LAGAHKRVVV QLREQLSLES BACU012916/1-736 LQSLVHGITS EAFAVPFFMI ICLVMFYFIA LAGAHQRVVV QLREQLSLES ENSBTAP00000021939/1-706 LQTLVYGITS EAFAVPFFMI ICLIMFYFIA LAGAHKRVVV QLREQLNLES 751 800 ENSP00000304710/1-723 RDKCYLIQKL TEAQRDMRN- -- bmy_06281T0/1-649 RDKRYLIQKL TEAQRDMRNR LD BACU012916/1-736 RDKRYLIQKL TEAQRDMRNR LD ENSBTAP00000021939/1-706 RDKRYLIQKL TEAQRDLRNR LD