KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:15:48 2014  Check: 00 ..

 Name: BACU008549/1-168          Len:    183  Check:  5732  Weight:  1.00
 Name: ENSP00000403987/1-167     Len:    183  Check:  2609  Weight:  1.00
 Name: ENSBTAP00000021969/1-132  Len:    183  Check:  6517  Weight:  1.00
 Name: bmy_11595T0/1-124         Len:    183  Check:  6006  Weight:  1.00
 Name: ENSTTRP00000004648/1-124  Len:    183  Check:  7355  Weight:  1.00

//


                          1                                                   50
BACU008549/1-168          MPSPRHEDES CILDKVDSQS QATLLSIFSQ EYQKHIKRTH AKHHTSEAIE 
ENSP00000403987/1-167     ----MLRLRS GLRHLRATPN TRGSARLLCA EMPKKAGATT KGKSQSKEPE 
ENSBTAP00000021969/1-132  ---------- --------MC PYSSLLILCF HTP------- LGKNQSKEPE 
bmy_11595T0/1-124         ---------- ---------- ---------- ----MLRLGS GGKSQSKEAE 
ENSTTRP00000004648/1-124  ---------- ---------- ---------- -MPKKAGAVN KGKSQSKEAE 


                          51                                                 100
BACU008549/1-168          SYYQRYLNGV GKNGAAPVLL ELANEVDYAP SLMARIILER FLQEHEEAPP 
ENSP00000403987/1-167     RPL-PPLGPV AVDPKGCVTI AIHAKPGSKQ NAVTDLTAEA -VNVAIAAPP 
ENSBTAP00000021969/1-132  RPL-PPLGPV TVDPKGGVSI AIHAKPGSKQ NAVTDVTTEA -VSVAIAAPP 
bmy_11595T0/1-124         RPVPPPSGPV AVDSKGCVTI AIHAKPGSKQ NAVTDLTAEA -VSVAIAAPP 
ENSTTRP00000004648/1-124  RPV-PPSGPV AVDPKGCVTI AIHAKPGSKQ NAVTDLTAEA -VSVAIAAPP 


                          101                                                150
BACU008549/1-168          SKSVINSMLR DPSQIPDGVL ANQVYQCIVN DCCYGPLVDC IKHAIGHEH- 
ENSP00000403987/1-167     SEGEANAEL- --CRYLSKVL ELRKSDVVLD KTGSCYIAQA GLELLASSDL 
ENSBTAP00000021969/1-132  TEGEANAEL- --CRYLSKVL ELRKSDVVLD KGGKSR--EK VVKLLAS--- 
bmy_11595T0/1-124         TEGEANAEL- --CWYLSKVL ELRKSDVVLD KGGKSR--EK VVKLLAS--- 
ENSTTRP00000004648/1-124  TEGEANAEL- --CWYLSKVL ELRKSDVVLD KGGKSR--EK VVKLLAS--- 


                          151                                                200
BACU008549/1-168          ---------- ----EVLLRD LLLEKNLSFL AMY 
ENSP00000403987/1-167     PASASQSAGI TGVSHHTQPA LLLISL---- --- 
ENSBTAP00000021969/1-132  ---------- ------TPPE EILEKLKKQV EKK 
bmy_11595T0/1-124         ---------- ------TTPE EILEKLKKQV EKK 
ENSTTRP00000004648/1-124  ---------- ------TTPE EILEKLKKQV E--