KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:52 2014 Check: 00 .. Name: ENSP00000375778/1-1172 Len: 1172 Check: 8675 Weight: 1.00 Name: ENSBTAP00000022005/1-1172 Len: 1172 Check: 3210 Weight: 1.00 Name: ENSTTRP00000016121/1-1172 Len: 1172 Check: 4351 Weight: 1.00 Name: bmy_12972T0/1-1109 Len: 1172 Check: 43 Weight: 1.00 Name: BACU000013/1-1106 Len: 1172 Check: 3648 Weight: 1.00 // 1 50 ENSP00000375778/1-1172 MRPFFLLCFA LPGLLHAQQA CSRGACYPPV GDLLVGRTRF LRASSTCGLT ENSBTAP00000022005/1-1172 MRPLLLLYFG LPSLLCAQQA CSRGACYPPV GDLLIGRTRF LRASSTCGLT ENSTTRP00000016121/1-1172 MRPLLLLYFV LPSVLCAQQA CSRGACYPPV GDLLIGRTRF LRASSTCGLA bmy_12972T0/1-1109 ---------- ---------- ---------- ---------- ---------- BACU000013/1-1106 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000375778/1-1172 KPETYCTQYG EWQMKCCKCD SRQPHNYYSH RVENVASSSG PMRWWQSQND ENSBTAP00000022005/1-1172 KPETYCAQYG EWQMKCCKCD SRVAHNYNSH QVENVVSSSG PTRWWQSQND ENSTTRP00000016121/1-1172 KPETYCTQYG EWQMKCCKCD SRLPHNYNSH RVENVVSSSG PMRWWQSQND bmy_12972T0/1-1109 ---------- ---MKCCKCD SRLPHNYNSH RVENVVSSSG PMRWWQSQND BACU000013/1-1106 ---------- ---MKCCKCD SRLPHNYNSH RVENVVSSSG PMRWWQSQND 101 150 ENSP00000375778/1-1172 VNPVSLQLDL DRRFQLQEVM MEFQGPMPAG MLIERSSDFG KTWRVYQYLA ENSBTAP00000022005/1-1172 VSPVFLQLDL DRKFQLQDIM MDFKGPVPAG LLIERSSDFG KTWQVYQYLA ENSTTRP00000016121/1-1172 VSPVSLQLDL DRKFQLQDIM MDFKGPMPAG MLIERSSDSG KTWQVYQYLA bmy_12972T0/1-1109 VSPVSLQLDL DRKFQLQDLM MDFKGPMPAG MLIERSSDFG KTWQVYKYLA BACU000013/1-1106 VSPVSLQLDL DRKFQLQDLM MDFKGPMPAG MLIERSSDFG KTWQVYQYLA 151 200 ENSP00000375778/1-1172 ADCTSTFPRV RQGRPQSWQD VRCQSLPQRP NARLNGGKVQ LNLMDLVSGI ENSBTAP00000022005/1-1172 ADCGSAFPWV RQGQPQGWQD ARCQTLPQRP NGHPNGAKVQ LNLMDLASGI ENSTTRP00000016121/1-1172 ADCTSAFPRV RQGQPQSWQD ARCQPLPQRP NRRLDGAKVQ LNIMDLASGI bmy_12972T0/1-1109 ADCTSAFPRV RQGQPQSWQD ARCQPLPQRP NRRLDGAKVQ LNLMDLASGI BACU000013/1-1106 ADCTSAFPRV RQGHPQSWQD ARCQPLPQRP NRRLDGAKVQ LNLMDLASGI 201 250 ENSP00000375778/1-1172 PATQSQKIQE VGEITNLRVN FTRLAPVPQR GYHPPSAYYA VSQLRLQGSC ENSBTAP00000022005/1-1172 PATQSQKIQE LGEITNLRVN FTKLAPVPQR GYHPPSAYYA VSQLRLHGSC ENSTTRP00000016121/1-1172 PATQSQKFQE LGAITNLRVN FTRLAPVPQR GYHPPSAYYA VSQLRLQGSC bmy_12972T0/1-1109 PATQSQKIQE LGEITNLRVN FTRLAPVPQR GYHPPSAYYA VSQLRLQGSC BACU000013/1-1106 PATQSQKIQE LGEITNLRVN FTRLAPVPQR GYHPPSAYYA VSQLRLQGSC 251 300 ENSP00000375778/1-1172 FCHGHADRCA PKPGASAGPS TAVQVHDVCV CQHNTAGPNC ERCAPFYNNR ENSBTAP00000022005/1-1172 LCHGHADRCA PSSRTPASPS SAVQVHEVCV CQHNTAGPNC ERCAPFYNNR ENSTTRP00000016121/1-1172 FCHGHADRCA PNSRAPASPS TTVQVHGVCV CQHNTAGPNC EHCAPFYNDK bmy_12972T0/1-1109 FCHGHADRCA PNSRAPAGPS TTVQVHEVCV CQHNTAGTNC ERCAPFYNNR BACU000013/1-1106 FCHGHANRCA PNSRGPASPS TAVQVHEVCV CQHNTAGSNC ERCAPFYNNK 301 350 ENSP00000375778/1-1172 PWRPAEGQDA HECQRCDCNG HSETCHFDPA VFAASQGAYG GVCDNCRDHT ENSBTAP00000022005/1-1172 PWRPAEDQDP HECQRCDCNG HSETCHFDPA VFAASQGAHG GVCDNCRDHT ENSTTRP00000016121/1-1172 PWKPADDQDP HECQRCDCNG HSETCHFDPA VFAASQGTHG GVCDNCQHHT bmy_12972T0/1-1109 PWKPADDQDP HECQRCDCNG HSETCHFDPA VFAASQGAHG GVCDNCQHHT BACU000013/1-1106 PWKPADDQDP HECQRCDCNG HSETCHFDPA VFAASQGAHG GVCDNCQHHT 351 400 ENSP00000375778/1-1172 EGKNCERCQL HYFRNRRPGA SIQETCISCE CDPDGAVPGA PCDPVTGQCV ENSBTAP00000022005/1-1172 EGRNCERCQL HYFRNRRPGA PIQETCIPCE CDPDGAVPGA PCDPLTGQCV ENSTTRP00000016121/1-1172 EGKNCERCQL HYFRNRRPGA PIQETCIPCE CDPDGAVPGA PCDPVTGQCV bmy_12972T0/1-1109 EGKNCERCQL HYFRNRRPGA PIQETCLPCE CDPDGAVPGA PCDPVTGQCV BACU000013/1-1106 EGKNCERCQL HYFRNRRPGA PIQETCLPCE CDPDGAVPGA PCDPVTGQCV 401 450 ENSP00000375778/1-1172 CKEHVQGERC DLCKPGFTGL TYANPQGCHR CDCNILGSRR DMPCDEESGR ENSBTAP00000022005/1-1172 CKEHVQGERC DLCKPGFTGL TFSNPQGCHR CDCSVLGARR DVPCDEETGR ENSTTRP00000016121/1-1172 CKEQVQGERC DLCKPGFTGL TYANPQGCHR CDCSVLGARR DMPCDEESGR bmy_12972T0/1-1109 CKEQVQGERC DLCKPGFTGL TYANPQGCHR CDCSVLGTRR DMPCDEESGR BACU000013/1-1106 CKEQVQGERC DLCKPGFTGL TYANPQGCHR CDCSVLGTRR DMPCDEESGR 451 500 ENSP00000375778/1-1172 CLCLPNVVGP KCDQCAPYHW KLASGQGCEP CACDPHNSLS PQCNQFTGQC ENSBTAP00000022005/1-1172 CVCLPHVVGP KCDQCAPHHW KLASGRGCEP CACDPHNSLG PQCNQFTGQC ENSTTRP00000016121/1-1172 CLCLPHVVGP KCDQCARYHW KLASGRGCEP CACDPHNSLS PQCNQFTGQC bmy_12972T0/1-1109 CLCLPHVVGP KCDQCARYHW KLASGRGCEP CACDLHNSLS PQCHQFTGQC BACU000013/1-1106 CLCLPHVVGP KCDQCARYHW KLASGRGCEP CACNLHNSLS PQCHQFTGQC 501 550 ENSP00000375778/1-1172 PCREGFGGLM CSAAAIRQCP DRTYGDVATG CRACDCDFRG TEGPGCDKAS ENSBTAP00000022005/1-1172 ACREGFGGLT CRAAAIRQCP DRTYGDAAAG CRACDCDFRG TEGPGCDKAS ENSTTRP00000016121/1-1172 PCQEGFGGLT CNAAAIRQCP DKTYGDAAMG CRACDCDFRG TEGPGCDKAS bmy_12972T0/1-1109 PCQEGFGGLT CSTAAVRQCP DRTYGDAAMG CRACDCDFRG TEGPGCDKVS BACU000013/1-1106 PCQEGFGGLT CSTAAVRQCP DRTYGDAAMG CRACDCDFRG TEGPGCDKAS 551 600 ENSP00000375778/1-1172 GRCLCRPGLT GPRCDQCQRG YCNRYPVCVA CHPCFQTYDA DLREQALRFG ENSBTAP00000022005/1-1172 GRCLCRPGLT GPRCDQCQRG YCDRAPVCVA CHPCFQTYDG GLRERALRLA ENSTTRP00000016121/1-1172 GRCLCRPGST GPRCDQCQRG YCDRYPVCVA CHPCFQTYDA GLRERALRLS bmy_12972T0/1-1109 GRCLCRPGST GPRCDQCQRG YCDRYPVCVA CHPCFQTYDA GLRERALRLS BACU000013/1-1106 GRCLCRPGST GPRCDQCQRG YCDHYPVCVA CHPCFQTYDA GLRERALRLS 601 650 ENSP00000375778/1-1172 RLRNATASLW SGPGLEDRGL ASRILDAKSK IEQIRAVLSS PAVTEQEVAQ ENSBTAP00000022005/1-1172 GLRNASAALW PQPGLEDHGL ASRMLDAKSK MEQIQATLGD ALVTEEEVAQ ENSTTRP00000016121/1-1172 SLRNATTSLW PGPGLEDRGL ASRMLDTKNK LEQIQAILGG ASVTEQEVAQ bmy_12972T0/1-1109 SLRNATTSLW PGPGLEDRGL ASRMLDTKNK LEQIQAILGG ASVTEQEVAQ BACU000013/1-1106 SLRNATTSLW PGPGQEDRGL ASRMLDTKNK LEQIQAILGG ASVTEQEVAQ 651 700 ENSP00000375778/1-1172 VASAILSLRR TLQGLQLDLP LEEETLSLPR DLESLDRSFN GLLTMYQRKR ENSBTAP00000022005/1-1172 VANAIFSIRR TLQGLQLDLP LEEETLSLPG DLGSLDRSFN RLLVTYQSKR ENSTTRP00000016121/1-1172 VANAIVSIRQ TLQGVQVDLP LEEETLSLSG DLENLDRSFN RLLVMYQSKR bmy_12972T0/1-1109 VANAIISIRQ TLQGLQVDLP LEEETLSLPG DLENLDRSFN RLLVMYQSKR BACU000013/1-1106 VANAIVSIRQ TLQGLQVDLP LEEETLSLPG DLENLDRSFN RLLVMYQSKR 701 750 ENSP00000375778/1-1172 EQFEKISSAD PSGAFRMLST AYEQSAQAAQ QVSDSSRLLD QLRDSRREAE ENSBTAP00000022005/1-1172 EQFEKISSAD PSGAFRMLTA AHQRSSQAAQ QVSDSSRRLL QLRDSRREAE ENSTTRP00000016121/1-1172 EQFEKISSAD PSGAFRMLTA AHQRSSQAAQ QVADSSRWLL QLRDSRREAE bmy_12972T0/1-1109 EQFEKISSAD PSGAFRMLTA AHQRSSQAAQ QVADSSRWLL QLRDSRREAE BACU000013/1-1106 EQFEKISSAD PSGAFRMLTA AHQRSSQAAQ QVSDSSRWLL QLRDSRREAE 751 800 ENSP00000375778/1-1172 RLVRQAGGGG GTGSPKLVAL RLEMSSLPDL TPTFNKLCGN SRQMACTPIS ENSBTAP00000022005/1-1172 RLEQQVAGGP GASGPQLAAL RLEMASVPDL TPTINQLCGG SREMPCTPGA ENSTTRP00000016121/1-1172 RLEQQLGGAG GAGGPQLAAL RLQMASLPDL TPAANKLCGG PREMACTPGA bmy_12972T0/1-1109 RLEQKPGGGG GASGPQLAAL RLEMASLPDL TPTVNKLCGG SREMACTPGA BACU000013/1-1106 RLEQKLGGGG RAGGPQLAAL RLEMASLPDL TPTVNKLCGG SREMACTPGA 801 850 ENSP00000375778/1-1172 CPGELCPQDN GTACGSRCRG VLPRAGGAFL MAGQVAEQLR GFNAQLQRTR ENSBTAP00000022005/1-1172 CPGELCPRDN RTACGSRCRG ALPRAGGALR TAGQVAEQLR AFSTQLQQTR ENSTTRP00000016121/1-1172 CPGELCPRDN GTACGSHCRG ALPRAGGAFR TAGQVAKQLR GFNAQLQQTR bmy_12972T0/1-1109 CPGELCPRDN GTACGSHCSG ALPRAGGAFR MAGQVAEQLR GFNAQLQQTR BACU000013/1-1106 CPGELCPRDN GTACGSHCSG ALPRAGGAFR TAGQVAEQLR GFNAQLQQTR 851 900 ENSP00000375778/1-1172 QMIRAAEESA SQIQSSAQRL ETQVSASRSQ MEEDVRRTRL LIQQVRDFLT ENSBTAP00000022005/1-1172 QMIRAAEEAA SQVQSDTQRL ETQVSASRSQ MEEDVRRTRL LIQQVREFLS ENSTTRP00000016121/1-1172 QMIRAAEEAT LQVQSDAQSL EMQVSTSRAQ MEEDVTRTRL LIQQVRDFLS bmy_12972T0/1-1109 QMIRAAEEAT SQVQSDAQRL EMQVSTSRSQ MEEDVTRTRL LIQQVRDFLS BACU000013/1-1106 QMIRAAEEAT SQVQSDAQRL EMQVSTSRSQ MEEDVTRTRL LIQQVRDFLS 901 950 ENSP00000375778/1-1172 DPDTDAATIQ EVSEAVLALW LPTDSATVLQ KMNEIQAIAA RLPNVDLVLS ENSBTAP00000022005/1-1172 DPDTDTATIQ EVSEAVLALW LPTDSATVLQ KMNEIQAIAA RLPNVDLVLS ENSTTRP00000016121/1-1172 DPDTDIATIQ EVSEAVLALW LPTDSATVLR KMNEIQAIAA RLPNVDLVLS bmy_12972T0/1-1109 DPDTDTATIQ EVSEAVLALW LPTDSATVLQ KMNEIQAIAA RLPNVDLVLS BACU000013/1-1106 DPDTDTATIQ EVSEAVLALW LPTDSATVLR KMNEIQAIAA RLPNVDLVLS 951 1000 ENSP00000375778/1-1172 QTKQDIARAR RLQAEAEEAR SRAHAVEGQV EDVVGNLRQG TVALQEAQDT ENSBTAP00000022005/1-1172 QTKQDVARAR RLQAEAEQAR SRAHAVEGQV EEVLGALRQG TLALQEAQDT ENSTTRP00000016121/1-1172 QTKQDIARAR RLQAEAEQAR SRAHTVEGQV EDVLGNLRQG TLALQEAQDT bmy_12972T0/1-1109 QTKQDIARAR RLQAEAEQAR SRAHTVEGQV EDVLGNLRQG TLALQEARDT BACU000013/1-1106 QTKQDIARAR RLQAEAEQAR SRAHTVEGQV EDVLGNLRQG TLALQEARDT 1001 1050 ENSP00000375778/1-1172 MQGTSRSLRL IQDRVAEVQQ VLRPAEKLVT SMTKQLGDFW TRMEELRHQA ENSBTAP00000022005/1-1172 MRGTRRSMRL IQDRVAEVQQ VLGPAERLVT SMTQQLGGFR ARMEELGRRA ENSTTRP00000016121/1-1172 MQGTRRSLQL IQDRVAEVQQ VLGPAERLVT SLMEQLGGFR ARMEELGRRA bmy_12972T0/1-1109 MQGTRRSLQL IQDRVAEVQQ VLGPAERLVT GMMEQLGGFR ARMEELSLRA BACU000013/1-1106 MQGTRRSLQL IQDRVAE--- VLGPAERLVT GMMEQLGGFR ARMEELSRRT 1051 1100 ENSP00000375778/1-1172 RQQGAEAVQA QQLAEGASEQ ALSAQEGFER IKQKYAELKD RLGQSSMLGE ENSBTAP00000022005/1-1172 RQQQAQAAQA RQLAEEASKE ALNAQEGFER VKQKYAELKD RLDQSSMLGE ENSTTRP00000016121/1-1172 RQQRAQAAQA QQLAEEASKQ ALNAQEGFER IKQKYAELKD RLGRSPTPGE bmy_12972T0/1-1109 RQQRAQAAQA QQLAEEASEQ ALSAQEGFER IKQKYAELKD RLGQSPMLGE BACU000013/1-1106 RQQRAQAAQA QQLAEEASEQ ALSAQEGFER IKQKYAELKD QLGRSPMLGG 1101 1150 ENSP00000375778/1-1172 QGARIQSVKT EAEELFGETM EMMDRMKDME LELLRGSQAI MLRSADLTGL ENSBTAP00000022005/1-1172 QGSRILSVKT EAEELFGETM EMMDRMRDME SELLQGSQAI VLRSADLTGL ENSTTRP00000016121/1-1172 QGSRILSIKM EAEELFGETM EMMDKMKDME SELLRGSQAI TLRSADLTGL bmy_12972T0/1-1109 QGSRILSIKT EAEELFGETM EMMDRMKDME SELLRGSQAI MLRSADLTGL BACU000013/1-1106 QGSRILSIKT EAEELFGETM EMMDRMKDME SELLRGSQAI MLRSADLTGL 1151 1200 ENSP00000375778/1-1172 EKRVEQIRDH INGRVLYYAT CK ENSBTAP00000022005/1-1172 EQRVEQIRNH INGRVLYYAT CK ENSTTRP00000016121/1-1172 EKHVEQIRNH INGRVLYYAT CK bmy_12972T0/1-1109 EKHVEQIRNH INGRVLYYAT CK BACU000013/1-1106 EKHVEQIRNH INGRVLYYAT CK