KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:15:53 2014  Check: 00 ..

 Name: ENSP00000399392/1-250     Len:    255  Check:  1143  Weight:  1.00
 Name: ENSBTAP00000022018/1-217  Len:    255  Check:  595  Weight:  1.00
 Name: bmy_09352T0/1-214         Len:    255  Check:  9060  Weight:  1.00
 Name: ENSTTRP00000007741/1-217  Len:    255  Check:  1179  Weight:  1.00

//


                          1                                                   50
ENSP00000399392/1-250     MDLAQPSQPV DELELSVLER QPEENTPLNG ADKVFPSLDE EVPPAEANKE 
ENSBTAP00000022018/1-217  MEGASPPSPG NELELSVIQG RPEEQTPLNG AVQGILSSAE EPCPVQADKE 
bmy_09352T0/1-214         MEGARPPSPG DELELSVIQG QPDEQAPLNG AVQGIFALEE EPCPVQ---- 
ENSTTRP00000007741/1-217  MEGAGPPSPG DDLELSVIQG QPDEQTPLSG AVQGIFPQEE EPCPVQADKE 


                          51                                                 100
ENSP00000399392/1-250     SPWSSCNKNV VGRCKLWMII TSIFLGVITV IIIGLCLAAV TYVDEDENEI 
ENSBTAP00000022018/1-217  SPWSSCNKKL IGKCKLWMVL ASVFLSFILV IIISLCLTGV TYIDEDENEI 
bmy_09352T0/1-214         ---------- ---CKLWMVL ASVFLGLVIV IIISLCLTGV TYVDEDENEI 
ENSTTRP00000007741/1-217  SPWNSCNKNL VGKCKLWMAL ASVFLGLVIV IIISLCLIGV TYVDEDENEI 


                          101                                                150
ENSP00000399392/1-250     LELSSNKTFF IMLKIPEECV AEEELPHLLT ER-NEVMEAG LCLKAVL--Y 
ENSBTAP00000022018/1-217  LELSSNETFL VMLKIPEECV SEEELPDMLE KRVTHVYSDS PALNRYFTSV 
bmy_09352T0/1-214         LELSSNKTFL VMLKIPEDCV TEEKLPDLLT KRLTDVYSSS PALSRYFTSV 
ENSTTRP00000007741/1-217  LELSSNKTFL VTLKIPEECV TEEKLPDLLT KRLTDVYSSS PALSRYFTSV 


                          151                                                200
ENSP00000399392/1-250     QVLEMKGIHS VLQKRFCGLI QKHQQHQRGG DSFLSRFYS- -LALSPVKQL 
ENSBTAP00000022018/1-217  EVMDFSGENA TIIFRL---- --HFRVPPED DSFMKYVMSE EFVLGVLQQD 
bmy_09352T0/1-214         EIIDFSGENA TITYHL---- --HFGFPSED HNFMKYVMSE ELVLGVLQQD 
ENSTTRP00000007741/1-217  EIVDCSGENA TITYHL---- --HFGFPSED HNFMKYVMSE ELVLGVLQQD 


                          201                                                250
ENSP00000399392/1-250     PSTASAGSSL DKGRKPARVG AIGSAGMSHC WRSLVFCLFL FCFVLFFETG 
ENSBTAP00000022018/1-217  FHDQNMAGCE TLGLDPGSLC SYD------- ---------- ---------- 
bmy_09352T0/1-214         FHDQNVSGCE TLGLDPASLR FSGKSSTSEG RAVMINK--- ---------- 
ENSTTRP00000007741/1-217  FHDQNVSGCE TLGLDPASLW FSE------- ---------- ---------- 


                          251                                                300
ENSP00000399392/1-250     SRSVA 
ENSBTAP00000022018/1-217  ----- 
bmy_09352T0/1-214         ----- 
ENSTTRP00000007741/1-217  -----