KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:54 2014 Check: 00 .. Name: ENSTTRP00000008375/1-759 Len: 760 Check: 28 Weight: 1.00 Name: ENSP00000357998/1-760 Len: 760 Check: 4240 Weight: 1.00 Name: ENSBTAP00000022030/1-760 Len: 760 Check: 4097 Weight: 1.00 Name: bmy_10886T0/1-713 Len: 760 Check: 8714 Weight: 1.00 Name: BACU014190/1-704 Len: 760 Check: 9060 Weight: 1.00 // 1 50 ENSTTRP00000008375/1-759 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQNRLKNIR ENSP00000357998/1-760 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQIRLKNIR ENSBTAP00000022030/1-760 MAGQQFQYDD SGNTFFYFLT SFVGLIVIPA TYYLWPRDQN AEQNRLKNIR bmy_10886T0/1-713 ----MANYSD SE-------- ---------- ----LFKPSD CEQNRLKNIR BACU014190/1-704 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008375/1-759 KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL AGWALLLFLT YKVSKTDREY ENSP00000357998/1-760 KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL AGWALFLFLA YKVSKTDREY ENSBTAP00000022030/1-760 KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL AGWALFLFLA YKVSKTDREY bmy_10886T0/1-713 KVYGRCMWYR LRLLKPQPNI IPTVKKIVLL AGWALLLFLT YKVSKTDREY BACU014190/1-704 ------MWYR LRLLKPQPNI IPTVKKIVLL AGWALLLFLT YKVSKTDREY 101 150 ENSTTRP00000008375/1-759 QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA ENSP00000357998/1-760 QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA ENSBTAP00000022030/1-760 QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA bmy_10886T0/1-713 QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA BACU014190/1-704 QEYNPYEVLN LDPGATVAEI KKQYRLLSLK YHPDKGGDEV MFMRIAKAYA 151 200 ENSTTRP00000008375/1-759 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI LVLLVYGLAF ENSP00000357998/1-760 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI LVLLVYGLAF ENSBTAP00000022030/1-760 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI LVLLVYGLAF bmy_10886T0/1-713 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI L--------- BACU014190/1-704 ALTDEESRKN WEEFGNPDGP QATSFGIALP AWIVDQKNSI LVLLVYGLAF 201 250 ENSTTRP00000008375/1-759 MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL ENSP00000357998/1-760 MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL ENSBTAP00000022030/1-760 MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL bmy_10886T0/1-713 --------GS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL BACU014190/1-704 MVILPVVVGS WWYRSIRYSG DQILIRTTQI YTYFVYKTRN MDMKRLIMVL 251 300 ENSTTRP00000008375/1-759 AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK ENSP00000357998/1-760 AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK ENSBTAP00000022030/1-760 AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK bmy_10886T0/1-713 AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK BACU014190/1-704 AGASEFDPQY NKDATSRPTD NILIPQLIRE IGSINLKKNE PPLTCPYSLK 301 350 ENSTTRP00000008375/1-759 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQKMVTVI CQLIIMARSR ENSP00000357998/1-760 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIVMARNR ENSBTAP00000022030/1-760 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIIMARSR bmy_10886T0/1-713 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIIMARSR BACU014190/1-704 ARVLLLSHLA RMKIPETLEE DQQFMLKKCP ALLQEMVNVI CQLIIMARSR 351 400 ENSTTRP00000008375/1-759 EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN ENSP00000357998/1-760 EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN ENSBTAP00000022030/1-760 EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN bmy_10886T0/1-713 EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN BACU014190/1-704 EEREFRAPTL ASLENCMKLS QMAVQGLQQF KSPLLQLPHI EEDNLRRVSN 401 450 ENSTTRP00000008375/1-759 HKKYKIKTIQ DLVSLKESDR HNLLHFLEDE KYEEVMAVLG SFPYVTMDIK ENSP00000357998/1-760 HKKYKIKTIQ DLVSLKESDR HTLLHFLEDE KYEEVMAVLG SFPYVTMDIK ENSBTAP00000022030/1-760 HKKFKIKTIQ DLVSLKESDR HNLLHFLEDE KYEEVMAVLG SFPYVTMDIK bmy_10886T0/1-713 HKKYKIKTIQ DLVSLKESDR HNLLHFLEDE KYEEVMAVLG SFPFVTMDIK BACU014190/1-704 HKKYKIKTIQ DLVSLKESDR HNLLHFLEDE KYEEVMAVLG SFPFVTMDIK 451 500 ENSTTRP00000008375/1-759 SQXXXXXXXX XXXXXXXXXX XXXXXXXXXX EVFEKEQSIC AAEEQPAEDG ENSP00000357998/1-760 SQVLDDEDSN NITVGSLVTV LVKLTRQTMA EVFEKEQSIC AAEEQPAEDG ENSBTAP00000022030/1-760 SQVLDDEDSN NITVGSLVTV LVKLTRQTMA EVFEKEQSIC AAEEQPADDG bmy_10886T0/1-713 SQVLDDEDSN NITVGSLVTV LVKLTRQTMA EVFEKEQSIC AAEEQPAEDG BACU014190/1-704 SQVLDDEDSN NITVGSLVTV LVKLTRQTMA EVFEKEQSIC AAEEQPAEDG 501 550 ENSTTRP00000008375/1-759 QGDTNKNRTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVP LSQPKQQKQK ENSP00000357998/1-760 QGETNKNRTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVL LPQSKQQKQK ENSBTAP00000022030/1-760 QGDTNKNKTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVP LSQPKQQKQK bmy_10886T0/1-713 QGDTNKNRTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVP LSQPKQQKQK BACU014190/1-704 QGDTNKNRTK GGWQQKSKGP KKTAKSKKKK PLKKKPTPVP LSQPKQQKQK 551 600 ENSTTRP00000008375/1-759 QANGVVGSEA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE ENSP00000357998/1-760 QANGVVGNEA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE ENSBTAP00000022030/1-760 QANGVVGSEA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE bmy_10886T0/1-713 QANG----EA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE BACU014190/1-704 QANGVVGSEA AVKEDEEEVS DKGSDSEEEE TNRDSQSEKD DGSDRDSDRE 601 650 ENSTTRP00000008375/1-759 QDEKQNKDDE AEWKELQQSI QRKERALLET KSKITHPVYS LYF-EEKQEW ENSP00000357998/1-760 QDEKQNKDDE AEWQELQQSI QRKERALLET KSKITHPVYS LYFPEEKQEW ENSBTAP00000022030/1-760 QDEKQNKDDE AEWQELQQSI QRKERALLET KSKITHPVYS LYFPEEKQEW bmy_10886T0/1-713 QDEKQNKDDE AEWQELQQSI QRKERALLET KSKITHPVYS LYFPEEKQEW BACU014190/1-704 QDEKQNKDDE AEWQELQQSI QRKERALLET KSKITHPVYS LYFPEEKQEW 651 700 ENSTTRP00000008375/1-759 WWLYIADRKE QTLISMPYHV CTLKDMEEVE LKFPAPGKPG NYQYTVFLRS ENSP00000357998/1-760 WWLYIADRKE QTLISMPYHV CTLKDTEEVE LKFPAPGKPG NYQYTVFLRS ENSBTAP00000022030/1-760 WWLYIADRKE QTLISMPYHV CTLKDTEEVE LKFPAPGKPG NYQYTVFLRS bmy_10886T0/1-713 WWLYIADRKE QTLISMPYHV CTLKDMEEVE LKFPAPGKPG NYQYTVFLRS BACU014190/1-704 WWLYIADRKE QTLISMPYHV CTLKDMEEVE LKFPAPGKPG NYQYTVFLRS 701 750 ENSTTRP00000008375/1-759 DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAVEGDEDQE DSEGFEDSFE ENSP00000357998/1-760 DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAIEGDEDQE DSEGFEDSFE ENSBTAP00000022030/1-760 DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAIEGDEDQE DSEGFEDSFE bmy_10886T0/1-713 DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAVEGDEDQE DSEGFEDSFE BACU014190/1-704 DSYMGLDQIK PLKLEVHEAK PVPENHPQWD TAVEGDEDQE DSEGFEDSFE 751 800 ENSTTRP00000008375/1-759 EEEEEEEDDD ENSP00000357998/1-760 EEEEEEEDDD ENSBTAP00000022030/1-760 EEEEEEEDDD bmy_10886T0/1-713 EEEEEEEDDD BACU014190/1-704 EEEEEEEDDD