KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:15:58 2014 Check: 00 .. Name: ENSP00000293872/1-371 Len: 519 Check: 4871 Weight: 1.00 Name: ENSBTAP00000022041/1-371 Len: 519 Check: 5946 Weight: 1.00 Name: ENSTTRP00000011465/1-369 Len: 519 Check: 37 Weight: 1.00 Name: BACU009264/1-453 Len: 519 Check: 9352 Weight: 1.00 Name: bmy_01859T0/1-285 Len: 519 Check: 9791 Weight: 1.00 // 1 50 ENSP00000293872/1-371 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022041/1-371 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011465/1-369 ---------- ---------- ---------- ---------- ---------- BACU009264/1-453 METPPPHCQP GGKQSKGRKS PFPPSSCLGV LVLGVLGKLS KVNPNADPKL bmy_01859T0/1-285 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000293872/1-371 ------MSAQ AQ-------- ---------- ---------- ---------- ENSBTAP00000022041/1-371 ------MSAQ AQ-------- ---------- ---------- ---------- ENSTTRP00000011465/1-369 -------MSA TQ-------- ---------- ---------- ---------- BACU009264/1-453 LPGEVRRQHQ AQTGPKETQL SNIEKQRGNV TPGLSQSCEL SHADPRPQDT bmy_01859T0/1-285 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000293872/1-371 ---------- ---------- -------MRA LLDQLMG--- ---------- ENSBTAP00000022041/1-371 ---------- ---------- -------MRA LLDQLMG--- ---------- ENSTTRP00000011465/1-369 ---------- ---------- -------MRA LLYRFMG--- ---------- BACU009264/1-453 VRTSTTVQFY EDIQKNSQPP TCHYFKIITA FLQTLHGNHF PSHRGEKNSF bmy_01859T0/1-285 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000293872/1-371 ---TARD--- --------GD ETRQRVKFTD DRVCKSHLLD CCPHDILAGT ENSBTAP00000022041/1-371 ---TARD--- --------GD ETRQRVKFTD DRVCKSHLLD CCPHDILAGT ENSTTRP00000011465/1-369 ---TARD--- --------GD ETRQRVKFTD DRVCKSHLLD CCPHDILAGT BACU009264/1-453 RTTNQRDQTL KIKHFHWKGD ETRQRVKFTD DRVCKSHLLD CCPHDILAGT bmy_01859T0/1-285 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000293872/1-371 RMDLGECTKI HDLALRADYE IASKERDLFF ELDAMDHLES FIAECDRRTE ENSBTAP00000022041/1-371 RMDLGECTKI HDLALRADYE IASKERDLFF ELDAMDHLES FIAECDRRTE ENSTTRP00000011465/1-369 RMDLGECTKI HDLALRADYE IASKERDLFF ELDAMDHLES FIAECDRRTE BACU009264/1-453 RMDLGECTKI HDLALRADYE IASKERDLFF ELDAMDHLES FIAECDRRTE bmy_01859T0/1-285 ---------- ---------- ---------- ----MDHLES FIAECDRRTE 251 300 ENSP00000293872/1-371 LAKKRLAETQ EEISAEVSAK AEKVHELNEE IGKLLAKAEQ LGAEGNVDES ENSBTAP00000022041/1-371 LAKKRLAETQ EEISAEVSAK AEKVHELNEE IGKLLAKAEQ LGAEGNVDES ENSTTRP00000011465/1-369 LAKKRLAETQ EEISAEVSAK AEKVHELNEE IGKLLAKAEQ LGAEGNVDES BACU009264/1-453 LAKKRLAETQ EEISAEVSAK AEKVHELNEE IGKLLAKAEQ LGAEGNVDES bmy_01859T0/1-285 LAKKRLAETQ EEISAEVSAK AEKVHELNEE IGKLLAKAEQ LGAEGNVDES 301 350 ENSP00000293872/1-371 QKILMEVEKV RAKKKEAEEE YRNSMPASSF QQQKLRVCEV CSAYLGLHDN ENSBTAP00000022041/1-371 QKILMEVEKV RAKKKEAEEE YRNSMPASSF QQQKLRVCEV CSAYLGLHDN ENSTTRP00000011465/1-369 QKILMEVEKV RAKKKEAEEE YRNSMPASSF QQQKLRVCEV CSAYLGLHDN BACU009264/1-453 QKILMEVEKV RAKKKEAEEE YRNSMPASSF QQQKLRVCEV CSAYLGLHDN bmy_01859T0/1-285 QKILMEVEKV RAKKKEAEEE YRNSMPASSF QQQKLRVCEV CSAYLGLHDN 351 400 ENSP00000293872/1-371 DRRLADHFGG KLHLGFIQIR EKLDQLRKTV AEKQEKRNQD RLRRREERER ENSBTAP00000022041/1-371 DRRLADHFGG KLHLGFIQIR EKLDQLRKTV AEKQEKRNQD RLRRREERER ENSTTRP00000011465/1-369 DRRLADHFGG KLHLGFIQIR EKLDQLRKTV AEKQEKRNQD RLRRREERER BACU009264/1-453 DRRLADHFGG KLHLGFIQIR EKLDQLRKTV AEKQEKRNQD RLRRREERER bmy_01859T0/1-285 DRRLADHFGG KLHLGFIQIR EKLDQLRKTV AEKQEKRNQD RLRRREERER 401 450 ENSP00000293872/1-371 EERLSRRSGS RTRDRRRSRS RDRRRRRSRS TSRERRKLSR SRSRDRHRRH ENSBTAP00000022041/1-371 EERLSRRSGS RTRDRRRSRS RDRRRRRSRS TSRERRKSSR SRSRDRHRRH ENSTTRP00000011465/1-369 EERL-RRSGS RTRDRVRSRS RDRRRRRSRS TSRERRKSSR SRSRDRHRRH BACU009264/1-453 EERLSRR--- ---------- ---------- ---------- ---------- bmy_01859T0/1-285 EERLSRRSGS RTRDRRRSRS RDRRRRRSRS TSRERRKSSR SRSRDRHRRH 451 500 ENSP00000293872/1-371 RSRSRSHSRG HRRASRDRSA KYKFSRERAS REESWESGRS ERGPPDWRLE ENSBTAP00000022041/1-371 RSRSRSHSRG HRRASRDRSS KYKFSRERTS REESWERGRS ERGATDWRLE ENSTTRP00000011465/1-369 RSRSRSHSRG HRRASRDRSS KYKFSRERAS REESWERGRS ERGATDWRLE BACU009264/1-453 ---------- ---------- ---FSRERAS REESWERGRS ERGATDWRLE bmy_01859T0/1-285 RSRSRSHSRG HRRASRDRSS KYKFSRERAS REESWERGRS ERGATDWRLE 501 550 ENSP00000293872/1-371 SSNGKMASRR SEEKEAGEI ENSBTAP00000022041/1-371 SANGKAASRR SEEKEAGEI ENSTTRP00000011465/1-369 STNGKTASRR SEEKEAGEI BACU009264/1-453 STNGKTASRR SEEKEAGEI bmy_01859T0/1-285 STNGKTASRR SEEKEAGEI