KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:15:58 2014 Check: 00 .. Name: ENSBTAP00000022045/1-552 Len: 558 Check: 1733 Weight: 1.00 Name: bmy_01861T0/1-558 Len: 558 Check: 2130 Weight: 1.00 Name: BACU018974/1-433 Len: 558 Check: 57 Weight: 1.00 Name: ENSTTRP00000004780/1-431 Len: 558 Check: 6369 Weight: 1.00 // 1 50 ENSBTAP00000022045/1-552 MTDGKDLEAE IHPLKSENRK VPENAGALAG KEPRGTPAPQ TRLSHCRTAA bmy_01861T0/1-558 MTDCKDLEAE IYPLKNENRK VQEHLGNPAG KETSVKPPPR SRLSRCRMVA BACU018974/1-433 MMDSKDLEAE IHPLKNENRK VQEHLGNPPG KETSVKPPPQ SRLSRCRMVA ENSTTRP00000004780/1-431 MTDGKDLEAE IHPLKNENRK VQEHLGNPAG KETSVKPPPQ SRLSRCRTVA 51 100 ENSBTAP00000022045/1-552 FFLSLFACLL VVFVVSFIIP CPDRPALQGV WRIDYNAAVA YDFLAAEDVN bmy_01861T0/1-558 FFLSLFVCLF VVFVVSFIIP CPDRPASQGV WRIDYEAAVA YDFLATEDVN BACU018974/1-433 FFLSLFICLF VVFVVSFIIP CPDRPASQGV WRIDYEAAVA YDFLATEDVN ENSTTRP00000004780/1-431 FFLSLFVCLF VVFVVSFIIP CPDRLASQGV WRIDYKAAVA YDFLATEDVN 101 150 ENSBTAP00000022045/1-552 KDKIQDILFL YKNTNSSRGN SSFSCADEGF SCPCTFVAAV SGASGSVLWE bmy_01861T0/1-558 KDRIQDVLFL YKNTNSSRSN FSLSCADEGF SSPCTFVAAV SGANGTVLWE BACU018974/1-433 KDRIQDVLFL YKNTNSSRSN FSLSCADEGF SSPCTFVAAV SGANGTVLWE ENSTTRP00000004780/1-431 KDRIQDVLFL YKNTNSSRSN FSLSCADEGF SSPCTFVAAV SGANGTVLWE 151 200 ENSBTAP00000022045/1-552 RPVAQDRAFV ECGILQPRGS AAPSACVVLG RPGSLVAVDT LTGKTLWSQP bmy_01861T0/1-558 RPVAQNRALV ECGVPQPRGS GVSSACIILG RPGPFIAVDS VTGETLWSHP BACU018974/1-433 RPVAQNRALV ECGVPQPRGS GASSACIILG RPGPFIAVDS VTGETLWSHP ENSTTRP00000004780/1-431 RPVAQNRALV ECGVPQPRGS GASSACIILG RPGPFIAVDS VTGETLWSHP 201 250 ENSBTAP00000022045/1-552 SSFGGNASVL SPLLRVPDLD ADGAPDLLVL IQEENQVNGS IYSGGTGQQV bmy_01861T0/1-558 SSFGGNVSVL SPLLQVPDID ADGVPDLLVL TQEENQVNGY VYSGSTGQQV BACU018974/1-433 SSFGGNVSVL SPLLQVPDID ADGVPDLLVL TQEENQVNGY VYSGSTGQQV ENSTTRP00000004780/1-431 SSFGGNVSIL SPLLQVPDID ADGVPDLLVL TQEENQVNGY VYSGGTGQQV 251 300 ENSBTAP00000022045/1-552 SPPDSLGVDG TSGSILHVTR AGAHYVLIPC GTALCSRSVK GLYEKVSRRD bmy_01861T0/1-558 GPPGSLGVDG TSGSILYVTS AGAHYVLIPC GTSLCSHSVK GLYEKATGRD BACU018974/1-433 GPPGSL---- ---------- -GAHYVLIPC GTSFCSHSVK GLYEKATGRD ENSTTRP00000004780/1-431 GPPGSM---- ---------- ---TCPLIPC GTSLCSHSVK GLYEKATGRE 301 350 ENSBTAP00000022045/1-552 SPLKSDPLWE DMLSAASHRL VVHSSGAIRY LMNVPGKAGD DLLLVSTEAY bmy_01861T0/1-558 SSLKSDPLWE GRLNATSHRL QEHSLGAVRY LMNVPGKVGE DLLLVSAEAC BACU018974/1-433 SSLKSDPLWE GRLNATSHRL QEHSSGAVRY LMNVPGKVGE DLLLVSAEAC ENSTTRP00000004780/1-431 SSLKSDPLWE GRLNATSRRL QEHSSGAVRY LMNVPGKVGE DLLLVSSEAC 351 400 ENSBTAP00000022045/1-552 MLLDGQDLTP RWTFGTTQVL RKPVLGYYKP DTPAVLVENG TGPDRQVLLL bmy_01861T0/1-558 VLLDGQELVP RWTLGAAQVL RKPILGYYKP DTPAMVIENG TGSKRQILLL BACU018974/1-433 VLLDGQELVP RWTLGAAQVL RKPILGYYKP DTPAMVIENG TGSERQILLL ENSTTRP00000004780/1-431 VLLDGQELVP RWTLGAAQVL RKPILGYYKP DTPAMVIENG TGSERQILLL 401 450 ENSBTAP00000022045/1-552 DLGSGAVLWS QALPGLPGDP PSASLPTADH RSAFFFWGIH EPTDSNQT-- bmy_01861T0/1-558 DLSSGAVLWS QALPGLPRDP RSASLPTADH RSAFFFWGLH ELAGANQTVQ BACU018974/1-433 DLSSGAVLWS QALPGLPRDP QSASLPTADH RSAFFFWGLH ELAGANQT-- ENSTTRP00000004780/1-431 DLSSGAVLGS QALPGLPRDP RSASLPTADH RSAFFFWGLH ELAGANQT-- 451 500 ENSBTAP00000022045/1-552 ----EPGAAG RRLYMLHPTL PGVLLELDNV SVPIVAFQVV LLEPGRHAAC bmy_01861T0/1-558 SWVLEPGAAG HRLYMFHPTL PGVLLELANI STRIVTFQVV LLEPSRHAAY BACU018974/1-433 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004780/1-431 ---------- ---------- ---------- ---------- ---------- 501 550 ENSBTAP00000022045/1-552 ILLTGPASPS PPGLVSVTKH KVQDLVLAGR VVHLAEGGAE SDQAVRDRLS bmy_01861T0/1-558 ILLTGPASPD PPGLVSVAKH KVRDLIPSSK VVRLAEGGPD SDQAVRDRFS BACU018974/1-433 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004780/1-431 ---------- ---------- ---------- ---------- ---------- 551 600 ENSBTAP00000022045/1-552 RLRYRSEA bmy_01861T0/1-558 RLRYRNEA BACU018974/1-433 -------- ENSTTRP00000004780/1-431 --------