KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:16:00 2014 Check: 00 ..
Name: ENSTTRP00000007326/1-636 Len: 663 Check: 2187 Weight: 1.00
Name: bmy_04539T0/1-506 Len: 663 Check: 1387 Weight: 1.00
Name: BACU005766/1-660 Len: 663 Check: 4182 Weight: 1.00
Name: ENSP00000363745/1-636 Len: 663 Check: 4421 Weight: 1.00
Name: ENSBTAP00000022054/1-633 Len: 663 Check: 424 Weight: 1.00
//
1 50
ENSTTRP00000007326/1-636 ---------- ---------- --MANQVNGN AVQLKEEEEP MDTSSVTHTE
bmy_04539T0/1-506 ---------- ---------- ---------- --MWGKSEEP TDK-------
BACU005766/1-660 MSPELRTPNG LVDKEIGIQH NKMANQVNGN AVQLKEEEEP MDTSSVTHTE
ENSP00000363745/1-636 ---------- ---------- --MANQVNGN AVQLKEEEEP MDTSSVTHTE
ENSBTAP00000022054/1-633 ---------- ---------- --MANQVNGN AVQLKEEEEP MDTSSVNHTE
51 100
ENSTTRP00000007326/1-636 HYKTLIEAGL PQKVAERLDE IFQTGLVAYV DLDERAIDAL REFNEEGALS
bmy_04539T0/1-506 ------EIG- ---IAKLTDD L---GILFYV D--------- -------ALK
BACU005766/1-660 HYKTLIEAGL PQKVAERLDE IFQTGLVAYV DLDERAIDAL REFNEEGALS
ENSP00000363745/1-636 HYKTLIEAGL PQKVAERLDE IFQTGLVAYV DLDERAIDAL REFNEEGALS
ENSBTAP00000022054/1-633 HYKTLIEAGL PQKVAERLDE IFQTGLVAYV DLDERAIDAL REFNEEGALS
101 150
ENSTTRP00000007326/1-636 VLQQFKESDL SHVQNKSAFL CGVMKTYRQR EKQGSKVQES TKGPDEAKIK
bmy_04539T0/1-506 VII------- ---------- ---------- ---------- ----------
BACU005766/1-660 VLQQFKESDL SHVQNKSAFL CGVMKTYRQR EKQGSKVQES TKGPDEAKIK
ENSP00000363745/1-636 VLQQFKESDL SHVQNKSAFL CGVMKTYRQR EKQGSKVQES TKGPDEAKIK
ENSBTAP00000022054/1-633 VLQQFKESDL SHVQNKSAFL CGVMKTYRQR EKQGSKVQES TKGPDEAKIK
151 200
ENSTTRP00000007326/1-636 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVF VGKIPRDLYE
bmy_04539T0/1-506 ---------- ---------- ---------- ----IKTKVF VGKIPRDLYE
BACU005766/1-660 ALLERTGYTL DVTTGQRKYG GPPPDSVYSG MQPGIGTEVF VGKIPRDLYE
ENSP00000363745/1-636 ALLERTGYTL DVTTGQRKYG GPPPDSVYSG VQPGIGTEVF VGKIPRDLYE
ENSBTAP00000022054/1-633 ALLERTGYTL DVTTGQRKYG GPPPDSVYSG VQPGIGTEVF VGKIPRDLYE
201 250
ENSTTRP00000007326/1-636 DELVPLFEKA GPIWDLRLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS
bmy_04539T0/1-506 DELVPLFEKA GPIWDLXLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS
BACU005766/1-660 DELVPLFEKA GPIWDLRLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS
ENSP00000363745/1-636 DELVPLFEKA GPIWDLRLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS
ENSBTAP00000022054/1-633 DELVPLFEKA GPIWDLRLMM DPLSGQNRGY AFITFCGKEA AQEAVKLCDS
251 300
ENSTTRP00000007326/1-636 YEIRPGKHLG VCISVANNRL FVGSIPKNKT KENILEEFSK VTGLTEGLVD
bmy_04539T0/1-506 YXIRPGKHLG VCISVANNRL FVGSIPKNKT KENILEEFSK V---TEGLVD
BACU005766/1-660 YEIRPGKHLG VCISVANNRL FVGSIPKNKT KENILEEFSK V---TEGLVD
ENSP00000363745/1-636 YEIRPGKHLG VCISVANNRL FVGSIPKNKT KENILEEFSK VTGLTEGLVD
ENSBTAP00000022054/1-633 YEIRPGKHLG VCISVANNRL FVGSIPKNKT KENILEEFSK V---TEGLVD
301 350
ENSTTRP00000007326/1-636 VILYHQPDDK KKNRGFCFLE YEDHKSAAQA RRRLMSGKVK VWGNVVTVEW
bmy_04539T0/1-506 VILYHQPDDK KKNRGFCFLE YEDHKSAAQA RRRLMSGKVK VWGNVVTVEW
BACU005766/1-660 VILYHQPDDK KKNRGFCFLE YEDHKSAAQA RRRLMSGKVK VWGNVVTVEW
ENSP00000363745/1-636 VILYHQPDDK KKNRGFCFLE YEDHKSAAQA RRRLMSGKVK VWGNVVTVEW
ENSBTAP00000022054/1-633 VILYHQPDDK KKNRGFCFLE YEDHKSAAQA RRRLMSGKVK VWGNVVTVEW
351 400
ENSTTRP00000007326/1-636 ADPVEEPDPE VMAKVKVLFV RNLATTVTEE ILEKSFSEFG KLERVKKLKD
bmy_04539T0/1-506 ADPVEEPDPE VMAKVKVLFV RNLATTVTEE ILEKSFSEFG KLERVKKLKD
BACU005766/1-660 ADPVEEPDPE VMAKVKVLFV RNLATTVTEE ILEKSFSEFG KLERVKKLKD
ENSP00000363745/1-636 ADPVEEPDPE VMAKVKVLFV RNLATTVTEE ILEKSFSEFG KLERVKKLKD
ENSBTAP00000022054/1-633 ADPVEEPDPE VMAKVKVLFV RNLATTVTEE ILEKSFSEFG KLERVKKLKD
401 450
ENSTTRP00000007326/1-636 YAFVHFEDRG AAVKXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
bmy_04539T0/1-506 YAFVHFEDRG AAVKAMDEMN GKEIEGEEIE IVLAKPPDKK RKERQAARQA
BACU005766/1-660 YAFVHFEDRG AAVKAMDEMN GKEIEGEEIE IVLAKSPDKK RKERQAARQA
ENSP00000363745/1-636 YAFVHFEDRG AAVKAMDEMN GKEIEGEEIE IVLAKPPDKK RKERQAARQA
ENSBTAP00000022054/1-633 YAFVHFEDRG AAVKAMDEMN GKEIEGEEIE IVLAKPPDKK RKERQAARQA
451 500
ENSTTRP00000007326/1-636 XXXXXXXXXX XXPPPRMPPP IRGRGRGGGR GGYGYPPDYY GYEDYYDDYY
bmy_04539T0/1-506 SRSTAYEDYY YHPPPRMPPP IRGRGRGGGR GGYGYPPDYY GYEDYYDDXY
BACU005766/1-660 SRSTAYEDYY YHPPPRMPPT IRGRGRGGGR GGYGYSPDYY GYEDYYDDCY
ENSP00000363745/1-636 SRSTAYEDYY YHPPPRMPPP IRGRGRGGGR GGYGYPPDYY GYEDYYDDYY
ENSBTAP00000022054/1-633 SRSTAYEDYY YHPPPRMPPP IRGRGRGGGR GGYGYPPDYY GYEDYYDDYY
501 550
ENSTTRP00000007326/1-636 GYDYHDYRGG YEDPYYGYDD GYAVRGRGGG RGGRGAPPPP RGRGAPPPRG
bmy_04539T0/1-506 GYDYHDYRGG YEDPYYGYDD GYAVRGRGGG RGGRGAPPPP RGRGAPPPRG
BACU005766/1-660 GYDYHDYHGG YEDPYYGYDD GYAVRGRGGG RGGRGAPPPP RGRGAPPPRG
ENSP00000363745/1-636 GYDYHDYRGG YEDPYYGYDD GYAVRGRGGG RGGRGAPPPP RGRGAPPPRG
ENSBTAP00000022054/1-633 GYDYHDYRGG YEDPYYGYDD GYAVRGRGGG RGGRGAPPPP RGRGAPPPRG
551 600
ENSTTRP00000007326/1-636 RAGYSQRGAP LGPPRGSRGG RGGPAQQQRG RGSRGSRGNR GGNVGGKRKA
bmy_04539T0/1-506 RAGYSQRGXP LGPPRXSRGG RGGPXQQQRG RGSRGSRGNR GGNVGGKRKA
BACU005766/1-660 RADYSQRGAP LGPPRGSRGG RGGPAQQQRG RGSRGSRGNR GGNVGGKRKA
ENSP00000363745/1-636 RAGYSQRGAP LGPPRGSRGG RGGPAQQQRG RGSRGSRGNR GGNVGGKRKA
ENSBTAP00000022054/1-633 RAGYSQRGAP LGPPRGSRGG RGGPAQQQRG RGSRGSRGNR GGNVGGKRKA
601 650
ENSTTRP00000007326/1-636 DGYNQPDSKR RQTNNQQNWG SQPIAQQPLQ QGGDYSGNYG YNNDNQEFYQ
bmy_04539T0/1-506 DGYNQPDSKR RQTNNQQXWG SQPIAQQPLQ QGGDYSGNYG YNNDNQEFYQ
BACU005766/1-660 DGYNQPDSKR RQTNNQQNWG SQPIAQQPLQ QGGDYSGTMV TIMTTRNFIR
ENSP00000363745/1-636 DGYNQPDSKR RQTNNQQNWG SQPIAQQPLQ QGGDYSGNYG YNNDNQEFYQ
ENSBTAP00000022054/1-633 DGYNQPDSKR RQTNNQQNWG SQPIAQQPLQ QGGDYSGNYG YNNDNQEFYQ
651 700
ENSTTRP00000007326/1-636 DTYGQQWK-- ---
bmy_04539T0/1-506 DTYGQQWK-- ---
BACU005766/1-660 ILMGNSGNRQ VRA
ENSP00000363745/1-636 DTYGQQWK-- ---
ENSBTAP00000022054/1-633 DTYGQQWK-- ---