KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:01 2014 Check: 00 .. Name: BACU001341/1-433 Len: 443 Check: 7301 Weight: 1.00 Name: ENSP00000266304/1-303 Len: 443 Check: 483 Weight: 1.00 Name: ENSBTAP00000022056/1-310 Len: 443 Check: 2208 Weight: 1.00 Name: bmy_01000T0/1-303 Len: 443 Check: 907 Weight: 1.00 Name: ENSTTRP00000003154/1-250 Len: 443 Check: 2232 Weight: 1.00 // 1 50 BACU001341/1-433 --------MS DEGGGKKPPV EPQA--GPGP GRAARERGLP GPFPLVLKKL ENSP00000266304/1-303 --------MS DAGGGKKPPV DPQAGPGPGP GRAAGERGLS GSFPLVLKKL ENSBTAP00000022056/1-310 RASRARGTMS DAGGGKKPPV EPQAGPGPGP GRAAGERGLP GSFPLVLKKL bmy_01000T0/1-303 --------MS DAGGGKKPPV EPQAGPGPGP GRAAGERGLP GSFPLVLKKL ENSTTRP00000003154/1-250 ---------- ---------- ---------- ---------- ---------- 51 100 BACU001341/1-433 MENPLREARL DKEKGKDKLE EDEAAAASTM AVSASLMPPI WEETIPYDGE ENSP00000266304/1-303 MENPPREARL DKEKGKEKLE EDEAAAASTM AVSASLMPPI WDKTIPYDGE ENSBTAP00000022056/1-310 MENPPRETRL DKEKGKEKLE EDEAAAASTM AVSASLMPPI WDKTIPYDGE bmy_01000T0/1-303 MENPPREARL DKEKGKEKLE EDEAAAASTM AVSASLMPPI WDKTIPYDGE ENSTTRP00000003154/1-250 ---------- -KEKGKEKLE EDEAAAASTM AVSASLMPPI WDKTIPYDGE 101 150 BACU001341/1-433 SFHLECMDLD EFLLENGIPA SPTHLAQNLL LPVAELEGKG SASSSTASPP ENSP00000266304/1-303 SFHLEYMDLD EFLLENGIPA SPTHLAHNLL LPVAELEGKE SASSSTASPP ENSBTAP00000022056/1-310 SFHLEYMDLD EFLLENGIPA SPTHLVQNLL LPVAELEGKE SASSSTASPP bmy_01000T0/1-303 SFHLEYMDLD EFLLENGIPA SPTHLAQNLL LPVAELEGKE SASSSTASPP ENSTTRP00000003154/1-250 SFHLEYMDLD EFLLENGIPA SPTHLAQNLL LPVAELEGKE SASSSTASPP 151 200 BACU001341/1-433 SSSPAVFQPS ETVSSTESSL EKERETPSPI DPNCVEVDVN FNPDPADLVL ENSP00000266304/1-303 SSSTAIFQPS ETVSSTESSL EKERETPSPI DPNCVEVDVN FNPDPADLVL ENSBTAP00000022056/1-310 -SSTAVFQPS ETVSSTESSL EKERETPSPI DPNCVEVDVN FNPDPADLVL bmy_01000T0/1-303 SSSTAVFQPS ETVSSTESSL EKERETPSPI DPNCVEVDVN FNPDPADLVL ENSTTRP00000003154/1-250 SSSTAVFQPS ETVSSTESSL EKERETPSPI DPNCVEVDVN FNPDPADLVL 201 250 BACU001341/1-433 SSVPGGELFN PRKHKFAEED LKPQPMIKKA KKVFVPDEQT VTWYIHYSEG ENSP00000266304/1-303 SSVPGGELFN PRKHKFAEED LKPQPMIKKA KKVFVPDEQK DEKYWTRRKK ENSBTAP00000022056/1-310 SSVPGGELFN PRKHKFAEED LKPQPMIKKA KKVFVPDEQK DEKYWTRRKK bmy_01000T0/1-303 SSVPGGELFN PRKHKFAEED LKPQPMIKKA KKVFVPDEQK DEKYWTRRKK ENSTTRP00000003154/1-250 SSVPGGELFN PRKHKFAEED LKPQPMIKKA KKVFVPDEQK DEKYWTRRKK 251 300 BACU001341/1-433 SRVHFQAGRV CCPLQKVLEK NIRSHLPQSD QAQILDLKER ASSSRKLNFL ENSP00000266304/1-303 NNVAAKRSRD ARRLKE---- ---------N QITI-----R AA------FL ENSBTAP00000022056/1-310 NNVAAKRSRD ARRLKE---- ---------N QITI-----R AA------FL bmy_01000T0/1-303 NNVAAKRSRD ARRLKE---- ---------N QITI-----R AA------FL ENSTTRP00000003154/1-250 NNVAAKRSRD ARRLKE---- ---------N QITI-----R AA------FL 301 350 BACU001341/1-433 ELGCTFGMVF RKPVSTAPHA VGGKLGHVSR EAPAPSCSAF PCGPGPSPLS ENSP00000266304/1-303 EKENT---AL RTEVAELRKE VG-------- -----KCKTI ---------- ENSBTAP00000022056/1-310 EKENT---AL RTEVAELRKE VG-------- -----KCKTI ---------- bmy_01000T0/1-303 EKENT---AL RTEVAELRKE VG-------- -----KCKTI ---------- ENSTTRP00000003154/1-250 EKENT---AL RTEVAELRKE VG-------- -----KCKTI ---------- 351 400 BACU001341/1-433 LKSRRGLPSS GFRIHPVRAA WRASPGRTPG HLVAAQLFWN SGLWGHLCRL ENSP00000266304/1-303 ---------- ---------- ---------- ---------- ------VSKY ENSBTAP00000022056/1-310 ---------- ---------- ---------- ---------- ------VSKY bmy_01000T0/1-303 ---------- ---------- ---------- ---------- ------VSKY ENSTTRP00000003154/1-250 ---------- ---------- ---------- ---------- ------VSKY 401 450 BACU001341/1-433 ESPRSGSQET ATHASLAVVW CGGTHLPAAP FSCVQLDSSF GSA ENSP00000266304/1-303 ETK------- ---------- ---------- ---------Y GPL ENSBTAP00000022056/1-310 ETK------- ---------- ---------- ---------Y GPL bmy_01000T0/1-303 ETK------- ---------- ---------- ---------Y GPL ENSTTRP00000003154/1-250 ETK------- ---------- ---------- ---------Y GPL