KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:01 2014 Check: 00 .. Name: ENSTTRP00000008631/1-160 Len: 271 Check: 6058 Weight: 1.00 Name: ENSP00000199706/1-256 Len: 271 Check: 2411 Weight: 1.00 Name: ENSBTAP00000022057/1-256 Len: 271 Check: 4708 Weight: 1.00 Name: bmy_01868T0/1-271 Len: 271 Check: 9905 Weight: 1.00 Name: BACU009261/1-271 Len: 271 Check: 9502 Weight: 1.00 // 1 50 ENSTTRP00000008631/1-160 ---------- ---------- ---------- ---------- ---------- ENSP00000199706/1-256 MPLHKYPVWL WKRLQLREGI CSRLPGHYLR SLEEERTPTP VHYRPHGAKF ENSBTAP00000022057/1-256 MPLHKVPVGL WKRLRLREGI YSRLPAHYLR SLEEARTPTP VHFRPHGAKF bmy_01868T0/1-271 MPLHKVPVGL WKQLRLREGI YSRLPQHYLR SLEEARTPTP VHYRPHGVKI BACU009261/1-271 MPLHKVPVGL WKQLRLREGI YSRLPQHYLR SLEEARTPTP VHYRPHGVKF 51 100 ENSTTRP00000008631/1-160 ---------- ---------- ---------- ---------- ------LSKR ENSP00000199706/1-256 KINPKNGQRE RVEDVPIPIY FPPESQRGLW GGEGWILGQI YANNDKLSKR ENSBTAP00000022057/1-256 KINPKNGQRE RVEDVPIPVH YPPESQLGLW GGEGWLKGHR YVNNDKFSKR bmy_01868T0/1-271 KINPKNGQRE RVEDVPIPVH YPPESQLGLW GGEGWVQGHR YVNNDKLSKR BACU009261/1-271 KINPKNGQRE RVEDVPIPVH YPPESQLGLW GGEGWVQGHR YVNNDKLSKR 101 150 ENSTTRP00000008631/1-160 VKKVWKPQLF QRELYSEILD TRFTVTVTMR TLDLIDEAYG FDFYILK--- ENSP00000199706/1-256 LKKVWKPQLF EREFYSEILD KKFTVTVTMR TLDLIDEAYG LDFYILK--- ENSBTAP00000022057/1-256 VKKVWKPQLF QRELYSEILD TRFTVTVTMR TLDLIDEAYG FDFYILK--- bmy_01868T0/1-271 VKKVWKPQLF QRELYSEILD TRFTVTVTMR TLDLIDEAYG FDFYILKASR BACU009261/1-271 VKKVWKPQLF QRELYSEILD TKFTVTVTMR TLDLIDEAYG FDFYILKASR 151 200 ENSTTRP00000008631/1-160 ---------- --TPKEDLCS KFGMDLKRGM LLRLARQDPQ LHPDDPDRRA ENSP00000199706/1-256 ---------- --TPKEDLCS KFGMDLKRGM LLRLARQDPQ LHPEDPERRA ENSBTAP00000022057/1-256 ---------- --TPKEDLCS KFGMDLKRGM LLRLARQDPQ LHPDDPERRA bmy_01868T0/1-271 SAPRWGSLAS CQTPKEDLCS KFGMDLKRGM LLRLARQDPQ LHPDDPDRRA BACU009261/1-271 SAPRWGSLAS CQTPKEDLCS KFGMDLKRGM LLRLARQDPQ LHPDDPHRRA 201 250 ENSTTRP00000008631/1-160 AIYDKYKAFV IPEAEAEWVG LTLDEAVEKQ RLLEEKXXXX XXXXXXXXXX ENSP00000199706/1-256 AIYDKYKEFA IPEEEAEWVG LTLEEAIEKQ RLLEEKDPVP LFKIYVAELI ENSBTAP00000022057/1-256 AIYDKYKAFV IPEAEAEWVG LTLDEAVEKQ RLLEEKDPVP LFKVYVEELV bmy_01868T0/1-271 AIYDKYKAFV IPEAEAEWVG LTLDEAVEKQ RLLEEKDPVP LFKVYVEELI BACU009261/1-271 AIYDKYKAFV IPEAEAEWVG LTLDEAVEKQ RLLEEKDPVP LFKVYVEELI 251 300 ENSTTRP00000008631/1-160 XXXXXXXXXX XXXXXXRASR T ENSP00000199706/1-256 QQLQQQALSE PAVVQKRASG Q ENSBTAP00000022057/1-256 EQLQQQALSE PAVVQKRANR T bmy_01868T0/1-271 EQLQQQALSE PAVVQKRASR T BACU009261/1-271 EQLQQQALSE PAVVQKRASR M