KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:16:05 2014 Check: 00 .. Name: ENSBTAP00000022083/1-760 Len: 766 Check: 5815 Weight: 1.00 Name: ENSTTRP00000012067/1-749 Len: 766 Check: 8625 Weight: 1.00 Name: bmy_12426T0/1-764 Len: 766 Check: 9761 Weight: 1.00 Name: BACU010577/1-735 Len: 766 Check: 8847 Weight: 1.00 // 1 50 ENSBTAP00000022083/1-760 MAQASRCGGL LPPLAAVPPL RAQPGGAEEE QWQKK----- -RDVRGWPGL ENSTTRP00000012067/1-749 MAQASRSGGL LPPLATVPPL RAQAGGAEEE QWQRKRAGAL RRDVRGWL-- bmy_12426T0/1-764 MAQASRSGGL LPPLATVPPL RAQPRGAEEK QWQRKRAGAL RRDVRGWLRL BACU010577/1-735 MAQASRSGGL LPPLATMPPL RAQPRGTEEK QWQRKRAGAL RRDVRGWLRL 51 100 ENSBTAP00000022083/1-760 PVARSILCQD PRPDGAPKEQ PWWVAPADAG EHSEAGAVDW GQELAAGGLI ENSTTRP00000012067/1-749 ---------- ---GGAPRGQ PWCAVPADAG EHREAGAVDW GREPAAGGPT bmy_12426T0/1-764 PVARSIPCLD PRPGGTPRGQ PWWAVPADAG EHREAGAVDW GREPAAGGPT BACU010577/1-735 PAARSIPCLD PRPGGTPRGQ PLWAVPADAG EHREAGAVDW GREPAAGGPT 101 150 ENSBTAP00000022083/1-760 PPALRRLRAV LLRLQREREQ LLQARDCALH LQAAVRFLRI LSPGAPSPSH ENSTTRP00000012067/1-749 PPALQRLRAV LLRLHHERQE LLHAQDCARH LQATVRLLRI LSPGAPSPSH bmy_12426T0/1-764 PPALQRLRAV LLRLHHERQE LLHAQDCARH LQATVRLLRI LSPGAPSPGH BACU010577/1-735 PPALQRLRAV LLRLHHERQE LLQAQDCARH LQATVRLLRI LSPGAPSPGH 151 200 ENSBTAP00000022083/1-760 GLLLQLCRDL LQHLSGGAIL RSRLLEMPHP LLLARPVGLA AQRLDATVEM ENSTTRP00000012067/1-749 --LPQLCSDL LGHSSGGAVL RNGLQETPEP LLLARSVGLA AQRLDATIEM bmy_12426T0/1-764 --LPQLCRDL LAHPSGGAVL RSGFQETPES LLLARSVGLA AQRLDATMEM BACU010577/1-735 --LPQLCRDL LAHPSGGAVL RSGLQETPES LPLARSVGLA AQRLDATMEM 201 250 ENSBTAP00000022083/1-760 RLRALGRAPA TPALSSQLAD LLLALPAYHQ LQGKVFSQVP ASARPYPPGR ENSTTRP00000012067/1-749 QLRALGQAPA SPGLSSQIAD LLLALPAYHQ LQGKALSYVP GAARPYPPAR bmy_12426T0/1-764 QLRALGQAPA SPGLSSQIAD LLLALPAYHQ LQGKALSYVP GAARPYPPAR BACU010577/1-735 QLRALGQAPA SPGLSSQIAD LLLALPAYHQ LQGKALSYVP GAARPYPPAH 251 300 ENSBTAP00000022083/1-760 VLRLLTGERG CQVADWLDEA LRGSGLRDQL LRRCQEEREL LPGLLGLLGG ENSTTRP00000012067/1-749 VLRLLTGERG CQVAGWLDEA LRGSDLRDQL RRRCQEEREL LPGLLGLMGG bmy_12426T0/1-764 VLRLLTGERG CRVAGWLDEA LRGSDLRDQL RRRCQEEREL LPGLLGLMGG BACU010577/1-735 VLRLLAGERG CQVAGWLDEA LRGSDLRDQL RRRCQEEREL LPGLLGLMGG 301 350 ENSBTAP00000022083/1-760 VTGSASSELG LGGAGALWSQ YWTLLWAACA QSLDLSLGPW RDSRAAAQQL ENSTTRP00000012067/1-749 VTGSASSGLG LGGAGALWSQ YWTMLWAACA QSLDLSLGPW RDPRAAAQQL bmy_12426T0/1-764 VTGSASSGLG LGGAGALWSQ YWTMLWAACA QSLDLSLGPW RDPRAAAQQL BACU010577/1-735 VTGSASSGLG LGGAGALWSQ YWTMLWAACA QSLDLSLGPW RDPTAAAQQL 351 400 ENSBTAP00000022083/1-760 SQALGQASLP QECEKELASL CRNLTHQSLI WSWDQGFCQV LGSASGNQSS ENSTTRP00000012067/1-749 SQALGQASLP QECEKELASL CHNLIHQSLI WSWDQGFCQA LASASGNQSS bmy_12426T0/1-764 SQALGQASLP QECEKELASL CHNLIHQSLI WSWDQGFCQA LGSASGNQSS BACU010577/1-735 SQALG----- ---------- ---------- ----QGFCQA LGSASGNQSS 401 450 ENSBTAP00000022083/1-760 LPSSSCTTKL LQQLFPPLLD ALREPRSGLL LCGPPGPAPL ALGLCTLQTT ENSTTRP00000012067/1-749 LPSSSHTTEL LQQLFPPLLD ALREPRSGLL LCRPPGPAPL ALGLCILQTI bmy_12426T0/1-764 LPSSSQTTEL LQQLFPPLLD ALREPRSGLL LCRPPGPAPL SLGLCTLQTT BACU010577/1-735 LPSSSQTTEL LQQLFPPLLD ALREPRSGLL LCRPPGPAPL SLGLCTLQTT 451 500 ENSBTAP00000022083/1-760 LLWFWSRTQQ HLAAWAPGSF LLLIQKDLPP LLQEAEALSH LASEESLALD ENSTTRP00000012067/1-749 LLWFWGRTQQ HLAAWAPGSF LLLIQKDLPP LLYEAEALSS LASEESLALE bmy_12426T0/1-764 LLWFWGRTQQ HLAAWTPGSF LLLIQKDLPL LLYEAEALSS LASKESLALE BACU010577/1-735 LLWFWGRTQQ HLAAWAPGSF LLLIQKDLPP LLCEAEALSS LASEESLALE 501 550 ENSBTAP00000022083/1-760 VEQQLGLEIR KLTVQIQLLP EESLSLFFQE CHKQATQDFE LHMPRGRYWR ENSTTRP00000012067/1-749 VEQQLGLEIQ KLTAQIQLLP EESLSFFFQE CHKRATQDFE LHMPRGRYWR bmy_12426T0/1-764 VEQQLGLEIQ KLTAQIQLLP EESLSLFFQE CHKQATQDFE LHMPRGRYWX BACU010577/1-735 VEQQLGLEIQ KLTAQIQLLP EESLSLFFQE CHKRATQDFE LHMPRGRYWR 551 600 ENSBTAP00000022083/1-760 HRLCSELPSI PSEYAGLVVR RVLEPVLQGL HGLPPQAQAP ALSQALTAIL ENSTTRP00000012067/1-749 HRLCPELPSI PSEYAGLVVR RVLEPVLQGL QGLPQQAQAP ALSLVLTAIL bmy_12426T0/1-764 HRLCPELPSI PSEYAGLVVR RVLEPVLQGL QGLPHQAQAP ALSQALTAIL BACU010577/1-735 HRLCPELPSI PSEYAGLVVR RVLEPVLQGL QGLPHQAQAP ALSQALTAIL 601 650 ENSBTAP00000022083/1-760 GAWLDHILSH GIRFSLQGAL QLRQDFGVVR DLLEEEQWGL SPELRQTLFM ENSTTRP00000012067/1-749 GAWLDHILTH GIRFSLQGAL QLKQDFGVVR ELLEEEQWGL SPELRQTLFT bmy_12426T0/1-764 GAWLDHILTH GIRFSLQGAL QLRQDFGVVR ELLEEEQWGL SPELRQTLFT BACU010577/1-735 GAWLDHILTH GIRFSLQGAL QLRQDFGVVR ELLEEEQWGL SPELRQTLFT 651 700 ENSBTAP00000022083/1-760 LSIFQRLDGA LLCLLQQPLP KTQVHRRLPR CCACNEVQTM ELPSSSLNSL ENSTTRP00000012067/1-749 LSIFQRLDGA LLCLLQQPLP KTQVHRGPPC CCACNEVQTM ELPSSSLNSL bmy_12426T0/1-764 LSIFQRLDGA LLCLLQQPLP KTQVYRGPPC CCACNEVQTM ELPSSSLNSL BACU010577/1-735 LSIFQRLDGA LLCLLQQPLP KTQVHRGPPC CCACNEVQTM ELPSSSLNSL 701 750 ENSBTAP00000022083/1-760 ESLEPPLRPG VFPTQTAQLL STLWGGGPSP DAYLVGNQQA WLALRQHQHP ENSTTRP00000012067/1-749 ESLEPPLRPG ALPAQTAQLL STLWGEGPSP DAYLVGNQQA WLALRQHQHP bmy_12426T0/1-764 ESLEPPLRPG ALPAQTAQLL STLWGEGPSP EAYLVGNQQA WLALRQHQHP BACU010577/1-735 ESLEPPLRPG ALPAQTAQLL STLWGEGPSP EAYLVGNQQA WLALRQHQHP 751 800 ENSBTAP00000022083/1-760 RWHLSFLSCL GTSSES ENSTTRP00000012067/1-749 RRHLPFLSCL RTSSES bmy_12426T0/1-764 RRHLPFLSCL STSSES BACU010577/1-735 RRHLPFLSCL RTSSES