KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:07 2014 Check: 00 .. Name: ENSTTRP00000001810/1-979 Len: 998 Check: 3138 Weight: 1.00 Name: ENSP00000238616/1-979 Len: 998 Check: 2244 Weight: 1.00 Name: ENSBTAP00000022098/1-994 Len: 998 Check: 4329 Weight: 1.00 Name: bmy_10161T0/1-951 Len: 998 Check: 7120 Weight: 1.00 Name: BACU018234/1-938 Len: 998 Check: 1184 Weight: 1.00 // 1 50 ENSTTRP00000001810/1-979 ---------- ------MSVL GEYERHCDSL NSDFGSESGG GGDSGPGPSA ENSP00000238616/1-979 ---------- ------MSVL GEYERHCDSI NSDFGSESGG CGDSSPGPSA ENSBTAP00000022098/1-994 ATGDTQAGPV PAAAAAMSVL GEYERHCDSL NSDFGSESGG GGDSGPGPSA bmy_10161T0/1-951 ---------- ------MSVL GEYERHCDSL NSDFGSESVG GGDSGPGPSA BACU018234/1-938 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001810/1-979 GPGPRAGGGA AEQEELHYIP IRILGRGAFG EATLYRRTED DSLVVWKEVD ENSP00000238616/1-979 SQGPRAGGGA AEQEELHYIP IRVLGRGAFG EATLYRRTED DSLVVWKEVD ENSBTAP00000022098/1-994 GPVPRASGGA AEQEELHYIP IRVLGRGAFG EATLYRRTED DSLVVWKEVD bmy_10161T0/1-951 GPGPRAGGGA AEQEELHYIP IRILGRGAFG EATLYRRTED DSLVVWKEVD BACU018234/1-938 -------GGA AEQEELHYIP IRILGRGAFG EATLYRRTED DSLVVWKEVD 101 150 ENSTTRP00000001810/1-979 LTRLSEKERR DALNEIVILA LLQHDNIIAY YNHFMDNTTL LIELEYCNGG ENSP00000238616/1-979 LTRLSEKERR DALNEIVILA LLQHDNIIAY YNHFMDNTTL LIELEYCNGG ENSBTAP00000022098/1-994 LTRLSEKERR DALNEIVILA LLQHDNIIAY YNHFMDNTTL LIELEYCNGG bmy_10161T0/1-951 LTRLSEKERR DALNEIVILA LLQHDNIIAY YNHFMDNTTL LIELEYCNGG BACU018234/1-938 LTRLSEKERR DALNEIVILA LLQHDNIIAY YNHFMDNTTL LIELEYCNGG 151 200 ENSTTRP00000001810/1-979 NLYDKILRQK DKLFEEEMVV WYLFQIVSAV SCIHKAGILH RDIKTLNIFL ENSP00000238616/1-979 NLYDKILRQK DKLFEEEMVV WYLFQIVSAV SCIHKAGILH RDIKTLNIFL ENSBTAP00000022098/1-994 NLYDKILRQK DKLFEEEMVV WYLFQIVSAV SCIHKAGILH RDIKTLNIFL bmy_10161T0/1-951 NLYDKILRQK DKLFEEEMVV WYLFQIVSAV SCIHKAGILH RDIKTLNIFL BACU018234/1-938 NLYDKILRQK DKLFEEEMVV WYLFQIVSAV SCIHKAGILH RDIKTLNIFL 201 250 ENSTTRP00000001810/1-979 TKANLIKLGD YGLAKKLNSE YSMAETLVGT PYYMSPELCQ GVKYNFKSDI ENSP00000238616/1-979 TKANLIKLGD YGLAKKLNSE YSMAETLVGT PYYMSPELCQ GVKYNFKSDI ENSBTAP00000022098/1-994 TKANLIKLGD YGLAKKLNSE YSMAETLVGT PYYMSPELCQ GVKYNFKSDI bmy_10161T0/1-951 TKANLIKLGD YGLAKKLNSE YSMAETLVGT PYYMSPELCQ GVKYNFKSDI BACU018234/1-938 TKANLIKLGD YGLAKKLNSE YSMAETLVGT PYYMSPELCQ GVKYNFKSDI 251 300 ENSTTRP00000001810/1-979 WAVGCVIFEL LTLKRTFDAT NPLNLCVKIV QGIRAMEVDS NQYSLELIQM ENSP00000238616/1-979 WAVGCVIFEL LTLKRTFDAT NPLNLCVKIV QGIRAMEVDS SQYSLELIQM ENSBTAP00000022098/1-994 WAVGCVIFEL LTLKRTFDAT NPLNLCVKIV QGIRAMEVDS SQYSLELIQM bmy_10161T0/1-951 WAVGCVIFEL LTLKRTFDAT NPLNLCVKIV QGIRAMEVDS SQYSLELIQM BACU018234/1-938 WAVGCVIFEL LTLKRTFDAT NPLNLCVKIV QGIRAMEVDS SQYSLELIQM 301 350 ENSTTRP00000001810/1-979 VHACLDQDPE QRPTADELLD RPLLRKRR-R EMEEKVTLLN APTKRPRSST ENSP00000238616/1-979 VHSCLDQDPE QRPTADELLD RPLLRKRR-R EMEEKVTLLN APTKRPRSST ENSBTAP00000022098/1-994 VHACLDQDPE QRPTADELLD RPLLRKRRSR EMEEKVTLLN APTKRPRSST bmy_10161T0/1-951 VHACLD---- QRPTADELLD RPLLRKRR-R EMEEKVTLLN APTKRPRSST BACU018234/1-938 VHACLDQDPE QRPTADELLD RPLLRKRR-R EMEEKVTLLN APTKRPRSST 351 400 ENSTTRP00000001810/1-979 VTEAPIAVVT SRTSEVYVWG GGKSTPQKLD VIKSGCSARQ VCAGNTHFAV ENSP00000238616/1-979 VTEAPIAVVT SRTSEVYVWG GGKSTPQKLD VIKSGCSARQ VCAGNTHFAV ENSBTAP00000022098/1-994 VTEAPIAVVT SRTSEVYVWG GGKSTPQKLD VIKSGCSARQ VCAGNTHFAV bmy_10161T0/1-951 VTEAPIAVVT SRTSEVYVWG GGKSTPQKLD VIKSGCSARQ VCAGNTHFAV BACU018234/1-938 VTEAPIAVVT SRTSEVYVWG GGKSTPQKLD VIKSGCSARQ VCAGNTHFAV 401 450 ENSTTRP00000001810/1-979 VTVEKELYTW VNMQGGTKLH GQLGHGDKAS YRQPKHVEKL QGKAIRQVSC ENSP00000238616/1-979 VTVEKELYTW VNMQGGTKLH GQLGHGDKAS YRQPKHVEKL QGKAIRQVSC ENSBTAP00000022098/1-994 VTVEKELYTW VNMQGGTKLH GQLGHGDKAS YRQPKHVEKL QGKAIRQVSC bmy_10161T0/1-951 VTVEKELYTW VNMQGGTKLH GQLGHGDKAS YRQPKHVEKL QGKAIHQVSC BACU018234/1-938 VTVEKELYTW VNMQGGTKLH GQLGHGDKAS YRQPKHVEKL QGKAIHQVSC 451 500 ENSTTRP00000001810/1-979 GDDFTVCVTD EGQLYAFGSD YYGCMGMDKI AGPELLEPMQ LDFFLNNPVE ENSP00000238616/1-979 GDDFTVCVTD EGQLYAFGSD YYGCMGVDKV AGPEVLEPMQ LNFFLSNPVE ENSBTAP00000022098/1-994 GDDFTVCVTD EGQLYAFGSD YYGCMGVDKV AGAEVLEPMQ LDFFLSNPVE bmy_10161T0/1-951 GDDFTVCVTD EGQLYAFGSD YYGCMGMDKI AGPELLEPMQ LDFFLNNPVE BACU018234/1-938 GDDFTVCVTD EGQLYAFGSD YYGCMGMDKI AGPELLEPMQ LDFFLNNPVE 501 550 ENSTTRP00000001810/1-979 QVSCGDNHVV VLTRSKEVYS WGCGEYGRLG LDSEEDYYTP QKXXXXXXXX ENSP00000238616/1-979 QVSCGDNHVV VLTRNKEVYS WGCGEYGRLG LDSEEDYYTP QKVDVPKALI ENSBTAP00000022098/1-994 QVSCGDNHVV VLTRNKEVYS WGCGEYGRLG LDSEEDYYTP QKVDVPKALI bmy_10161T0/1-951 QVSCGDNHVV VLTRNKEVYS WGCGEY---- ---EEDYYTP QKVDVPKALI BACU018234/1-938 QVSCGDNHVV VLTRNKEVYS WGCGEYGRLG LDSEEDYYTP QKVDVPKALI 551 600 ENSTTRP00000001810/1-979 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000238616/1-979 IVAVQ-CGCD GTFLLTQSGK VLACGLNEFN KLGLNQCMSG IINHEAYHEV ENSBTAP00000022098/1-994 IVAVQ-CGCD GTFLLTQSGK VLACGLNEFN KLGLNQCMSG IINHEAYHEV bmy_10161T0/1-951 IVAVQ-CGCD GTFLLTQSGK VLACGLNEFN KLGLNQCMSG IINHE----- BACU018234/1-938 IVAVQ-CGCD GTFLLTQSGK VLACGLNEFN KLGLNQCMSG IINHEAYHEV 601 650 ENSTTRP00000001810/1-979 XXXXXXXXXX XXXXXXXXXX XXXQTHTAAI DERGRLLTFG CNKCGQLGVG ENSP00000238616/1-979 PYTTSFTLAK QLSFYKIRTI APGKTHTAAI DERGRLLTFG CNKCGQLGVG ENSBTAP00000022098/1-994 PYTTSFTLAK QLSFYKIRTI APGKTHTAAL DERGRLLTFG CNKCGQLGVG bmy_10161T0/1-951 ---------- -LSFYKIRTI APGKTHTAAI DERGRLLTFG CNKCGQLGVG BACU018234/1-938 PYTTSFTLAK QLSFYKIRTI APGKTHTAAI DERGRLLTFG CNKCGQLGVG 651 700 ENSTTRP00000001810/1-979 NYKKRLGINL LGGPLGGKQV IRVSCGDEFT IAATDDNHIF AWGNGGNGRL ENSP00000238616/1-979 NYKKRLGINL LGGPLGGKQV IRVSCGDEFT IAATDDNHIF AWGNGGNGRL ENSBTAP00000022098/1-994 NYKKRLGINL LGGPLGGKQV IRVSCGDEFT IAATDDNHIF AWGNGGNGRL bmy_10161T0/1-951 NYKKRLGINL LGGPLGGKQV IRVSCGDEFT IAATDDNHIF AWGNGGNGRL BACU018234/1-938 NYKKRLGINL LGGPLGGKQV IRVSCGDEFT IAATDDNHIF AWGNGGNGRL 701 750 ENSTTRP00000001810/1-979 AMTPTERPHG SDICTSWPRP IFGSLHHVPD LSCRGWHTIL IVEKVLNSKT ENSP00000238616/1-979 AMTPTERPHG SDICTSWPRP IFGSLHHVPD LSCRGWHTIL IVEKVLNSKT ENSBTAP00000022098/1-994 AMTPTERPHG SDICTSWPRP IFGSLHHVPD LSCRGWNTIL IVEKVLNSKT bmy_10161T0/1-951 AMTPTERPHG SDICTSWPRP IFGSLHHVPD LSCRGWHTIL IVEKVLNSKT BACU018234/1-938 AMTPTERPHG SDICTSWPRP IFGSLHHVPD LSCRGWHTIL IVEKVLNSKT 751 800 ENSTTRP00000001810/1-979 IRSNSSGLSI GTVVQSSSPG GGSGGGRGEE EDSQQ-ESET PDPSGGFRGT ENSP00000238616/1-979 IRSNSSGLSI GTVFQSSSPG GGGGGGGGEE EDSQQ-ESET PDPSGGFRGT ENSBTAP00000022098/1-994 IRSNSSGLSI GTVVQSSSPG GGSGGGR-ED DDSQQ-ESET PDPSGGFRGT bmy_10161T0/1-951 IRSNSSGLSI GTVVQSSSPG GGSGGGRGEE EDSQQ-ESET PDPSGGFRGT BACU018234/1-938 IRSNSSGLSI GTVVQSSSPG GGSGGGRGEE EDSQQXESET PDPSGGFRGT 801 850 ENSTTRP00000001810/1-979 MEADRGMEGL VSPTEAVRIS SGASSSCPGW LRKELENAEF IPMPDSPSPL ENSP00000238616/1-979 MEADRGMEGL ISPTEAMGNS NGASSSCPGW LRKELENAEF IPMPDSPSPL ENSBTAP00000022098/1-994 MEADRGMEGL VSPTEAMRIS SGASSSCPGW LRKELENAEF IPMPDSPSPL bmy_10161T0/1-951 MEADRGMEGL VSPTEAVRIG SGASSSCPGW LRKELENAEF IPMPDSPSPL BACU018234/1-938 MEADRGMEGL VSPTEAVRIG SGASSSCPGW LRKELENAEF IPMPDSPSPL 851 900 ENSTTRP00000001810/1-979 SAAFSESEKD TLPYEELQGL KVGSEAPLER KPPEGAWPPR LNPAGTCAGK ENSP00000238616/1-979 SAAFSESEKD TLPYEELQGL KVASEAPLEH KPQVEASSPR LNPAVTCAGK ENSBTAP00000022098/1-994 SAAFSESEKD TLPYDELQGL KMASEAPLEH KPPAGAWPPR LNPAGTCAGK bmy_10161T0/1-951 SAAFSESEKD TLPYEELQGL KVGSEAPLEH KPPAGAWPPR LNPAGTCAGK BACU018234/1-938 SAAFSESEKD TLPYEELQGL KVGSEAPLEH KPPAGAWPPR LNPAGTCAGK 901 950 ENSTTRP00000001810/1-979 GTPLT-PTCA CSTLQVEVER LQGLVLKCLA EQQKLQQENL QIFTQLQKLN ENSP00000238616/1-979 GTPLTPPACA CSSLQVEVER LQGLVLKCLA EQQKLQQENL QIFTQLQKLN ENSBTAP00000022098/1-994 GTPLA-PTCA CSSLQVEVER LQGLVLKCLA EQQKLQQENL QIFTQLQKLN bmy_10161T0/1-951 GTPLT-PTCA CSALQVEVER LQGLVLKCLA EQQKLQQENL QIFTQLQKLN BACU018234/1-938 GTPLT-PTCA CSTLQVEVER LQGLVLKCLA EQQKLQQENL QIFTQLQKLN 951 1000 ENSTTRP00000001810/1-979 KKLEGGQQVG MHSKGTQTAK EEMEMDPKPD LDSDSWCLLG TDSCRPSL ENSP00000238616/1-979 KKLEGGQQVG MHSKGTQTAK EEMEMDPKPD LDSDSWCLLG TDSCRPSL ENSBTAP00000022098/1-994 KKLEGGQQVG MHSKGTQTAK DETETDPRPD LDSDSWCLLG TDSCRPSL bmy_10161T0/1-951 KKLEGGQQVG MHSKGTQTAK EEMEMDPKPD LDSDSWCLLG TDSCRPSL BACU018234/1-938 KKLEGGQQVG MHSKGTQTAK EEMEMDPKPD LDSDSWCLLG TDSCRPSL