KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:08 2014 Check: 00 .. Name: ENSP00000463533/1-994 Len: 1386 Check: 5289 Weight: 1.00 Name: BACU006135/1-1278 Len: 1386 Check: 5800 Weight: 1.00 Name: ENSBTAP00000022102/1-905 Len: 1386 Check: 2869 Weight: 1.00 Name: bmy_17567T0/1-976 Len: 1386 Check: 651 Weight: 1.00 Name: ENSTTRP00000001573/1-996 Len: 1386 Check: 1810 Weight: 1.00 // 1 50 ENSP00000463533/1-994 ---------- ---------- ---------- -----MPVRR GHVAPQNTYL BACU006135/1-1278 ---------- ---------- ---------- -----MPVRR GHVAPQNTYL ENSBTAP00000022102/1-905 ---------- ---------- ---------- -----MPVRR GHVAPQNTYL bmy_17567T0/1-976 RGRRPPGAGR CGARGQTETQ GARALVAPGR GRSRKMPVRR GRVAPQNTYL ENSTTRP00000001573/1-996 ---------- ---------- ---------- -----MPVRR GHVSPHNTYL 51 100 ENSP00000463533/1-994 DTIIRKFEGQ SRKFLIANAQ MENCAIIYCN DGFCELFGYS RVEVMQQPCT BACU006135/1-1278 DTIIRKFEGQ SRKFLIANAQ MENCAIIYCN DGFCELFGYS RVEVMQRPCT ENSBTAP00000022102/1-905 DTIIRKFEGQ SRKFLIANAQ MENCAIIYCN DGFCELFGYS RVEVMQRPCT bmy_17567T0/1-976 DTIIRKFEGQ SRKFLIANAQ MENCAIIYCN DGFCELFGYS RVEVMQRPCT ENSTTRP00000001573/1-996 DTFIRKFEGQ SRKFLIANAQ MENCAIIYCN DGFCELFGYS RVEVMQRPCT 101 150 ENSP00000463533/1-994 CDFLTGPNTP SSAVSRLAQA LLGAEECKVD ILYYRKDASS FRCLVDVVPV BACU006135/1-1278 CDFLTGPNTP RSAMSRLAQA LLGAEECKVD ILYYRKDASS FRCLVDVVPV ENSBTAP00000022102/1-905 CDFLTGPNTP RSAMSRLAQA LLGAEECKVD ILYYRKDASC FRCLVDVVPV bmy_17567T0/1-976 CDFLTGPNTP RSAMSRLAQA LLGTEECKVD ILYYRKDASS FRCLVDVVPV ENSTTRP00000001573/1-996 CDFLTGPNTP RSAMSRLAQA LLGAEECKVD ILYYRKDASS FRCLVDVVPV 151 200 ENSP00000463533/1-994 KNEDGAVIMF ILNFEDLAQL LAKCSSRSLS QRLLSQSFLG SEGSHGRPGG BACU006135/1-1278 KNEDGAVIMF ILNFEDLAQL LAKRGNRSLS QRLLSQSFLG SEGSHGRPGA ENSBTAP00000022102/1-905 KNEDGAVIMF ILNFEDLAQL LAKRGSRSLS QRLLRQSFLG SDGSHGRSGA bmy_17567T0/1-976 KNEDGAVIMF ILNFEDLAQL LAKRGSRSLS QRLLSQSFLG SEGSHGRPGA ENSTTRP00000001573/1-996 KNEDGAVIMF ILNFEDLAQL LAKRGSRSLS QRLLSQSFLG SEGSHGRPGA 201 250 ENSP00000463533/1-994 PGPGTGRGKY RTISQIPQFT LNFVEFNLEK HRSSSTTEIE IIAPHKVVER BACU006135/1-1278 QGPGTGRVKY RTISQIPQFT LNFVEFNLEK HRSGSTTEIE IIAPHKVVER ENSBTAP00000022102/1-905 QGPGAGRVKY RTISQIPQFT LNFVEFNLEK HRSGSTTEIE IIAPHKVVER bmy_17567T0/1-976 QGPGTGRVKY RTISQIPQFT LNFVEFNLEK HRSGSTTEIE IIAPHKVVER ENSTTRP00000001573/1-996 QGPGQGRVKY RTISQIPQFT LNFVEFNLEK HRSGSTTEIE IIAPHKVVER 251 300 ENSP00000463533/1-994 TQNVTEKVTQ VLSLGADVLP EYKLQAPRIH RWTILHYSPF KAVWDWLILL BACU006135/1-1278 TQNVTEKVTQ VLSLGADVLP EYKLQAPRIH RGTLLHYSPF KAVWDWLILL ENSBTAP00000022102/1-905 TQNVTEKVTQ VLSLGADVLP EYKLQAPRIH RGTLLHYSPF KAVWDWLILL bmy_17567T0/1-976 TQNVTEKVTQ VLSLGADVLP EYKLQAPRIH RGTLLHYSPF KAVWDWLILL ENSTTRP00000001573/1-996 TQNVTEKVTQ VLSLGADVLP EYQLQAPRIH RGTLLHYSPF KAVWDWLILL 301 350 ENSP00000463533/1-994 LVIYTAVFTP YSAAFLLSDQ DESRRGACSY TCSPLTVVDL IVDIMFVVDI BACU006135/1-1278 LVIYTAIFTP YSAAFLLGDQ DEPQRADCGY ACSPLTTVDL VVDIMFVVDI ENSBTAP00000022102/1-905 LVIYTAVFTP YSAAFLLSDQ DESQRGDCGY TCSPLTVVDL IVDIMFVVDI bmy_17567T0/1-976 LVIYTAIFTP YSAAFLLGDQ DEPQRADCGY TCSPLTTVDL IVDIMFVVDI ENSTTRP00000001573/1-996 LVIYTAIFTP YSAAFLLGDQ DKPQRADCGY TCSPLTTVDL IVDIMFVVDI 351 400 ENSP00000463533/1-994 VINFRTTYVN TNDEVVSHPR RIAVHYFKGW FLIDMVAAIP FDLLIFRTGS BACU006135/1-1278 VINFRTTYVN TNDEVVSHPR RIAVHYFKGW FLIDVVAAIP FDLLIFRTGS ENSBTAP00000022102/1-905 VINFRTTYVN TNDEVVSHPR RIAVHYFKGW FLIDMVAAIP FDLLIFRTGS bmy_17567T0/1-976 VINFRTTYVN TNDEVVSHPR RIAVHYFKGW FLIDVVAAIP FDLLIFXTGS ENSTTRP00000001573/1-996 VINFRTTYVN ANDEVVSHPR RIAVHYFKGW FLIDMVAAIP FDLLIFRTGS 401 450 ENSP00000463533/1-994 DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLFLLM CTFALIAHWL BACU006135/1-1278 DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLFLLM CTFALIAHWL ENSBTAP00000022102/1-905 DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLFLLM CTFALIAHWL bmy_17567T0/1-976 DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLFLLM CTFALIAHWL ENSTTRP00000001573/1-996 DETTTLIGLL KTARLLRLVR VARKLDRYSE YGAAVLFLLM CTFALIAHWL 451 500 ENSP00000463533/1-994 ACIWYAIGNV ERPYLEHKIG WLDSLGVQLG KRYNGSDPAS GPSVQDKYVT BACU006135/1-1278 ACIWYAIGNV ERPYLEPKIG WLDSLGAQLG KRYNGSDPAS GPSVQDKYVT ENSBTAP00000022102/1-905 ACI------- ---------- ---------- ---------- ---------- bmy_17567T0/1-976 ACIWYAIGNV ERPYLEPKIG WLDSLGAQLG KRYNGSDPAS GPSVQDKYVT ENSTTRP00000001573/1-996 ACIWYAIGNV ERPYLEPKIG WLDSLGAQLG KRYNGSDPAS GPSVQDKYVT 501 550 ENSP00000463533/1-994 ALYFTFSSLT SVGFGNVSPN TNSEKVFSIC VMLIGSLMYA SIFGNVSAII BACU006135/1-1278 ALYFTFSSLT SVGFGNVSPN TNSEKVFSIC ---------- ---------- ENSBTAP00000022102/1-905 ------CSLT SVGFGNVSPN TNSEKVFSIC VMLIGSLMYA SIFGNVSAII bmy_17567T0/1-976 ALYFTFSSLT SVGFGNVSPN TNSEKVFSIC VMLIGSLMYA SIFGNVSAII ENSTTRP00000001573/1-996 ALYFTFSSLT SVGFGNVSPN TNSEKVFSIC VMLIGSLMYA SIFGNVSAII 551 600 ENSP00000463533/1-994 QRLYSGTARY HTQMLRVKEF IRFHQIPNPL RQRLEEYFQH AWSYTNGIDM BACU006135/1-1278 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022102/1-905 QRLYSGTARY HTQMLRVKEF IRFHQIPNPL RQRLEEYFQH AWSYTNGIDM bmy_17567T0/1-976 QRLYSGTARY HTQMLRVKEF IRFHQIPNPL RQRLEEYFQH AWSYTNGIDM ENSTTRP00000001573/1-996 QRLYSGTARY HTQMLRVKEF IRFHQIPNPL RQRLEEYFQH AWSYTNGIDM 601 650 ENSP00000463533/1-994 NAVLKGFPEC LQADICLHLH RALLQHCPAF SGAGKGCLRA LAVKFKTTHA BACU006135/1-1278 --VLKGFPEC LQADICLHLH RALLQHCPAF HGASKGCLRA LAVKFKTTHA ENSBTAP00000022102/1-905 NAVLKGFPEC LQADICLHLH RALLQHCPAF HGASKGCLRA LAVKFKTTHA bmy_17567T0/1-976 NAVLKGFPEC LQADICLHLH RALLQHCPAF HGASKGCLRA LAVKFKTAHA ENSTTRP00000001573/1-996 NAVLKGFPEC LQADICLHLH RALLQHCPAF HGASKGCLRA LAIKFKTTHA 651 700 ENSP00000463533/1-994 PPGDTLVHLG DVLSTLYFIS RGSIEILRDD VVVAILGKND IFGEPVSLHA BACU006135/1-1278 PPGDTLVHLG DVLSTLYFIS RGSIEILRDD VVVAILGKND IFGEPVSLHA ENSBTAP00000022102/1-905 PPGDTLVHLG DVLSTLYFIS RGSIEILRDD VVVAILGKND IFGEPVSLHA bmy_17567T0/1-976 PPGDTLVHLG DVLSTLYFIS RGSIEILRDD VVVAILGKND IFGEPVSLHA ENSTTRP00000001573/1-996 PPGDTLVHLG DVLSTLYFIS RGSIEILRDD VVVAILGKND IFGEPVSLHA 701 750 ENSP00000463533/1-994 QPGKSSADVR ALTYCDLHKI QRADLLEVLD MYPAFAESFW SKLEVTFNLR BACU006135/1-1278 RPGKSSADVR ALTYCDLHKI QRADLLEVLD MYPAFADSFW SKLEVTFNLR ENSBTAP00000022102/1-905 RPGKSSADVR ALTYCDLHKI QRADLLEVLD MYPAFADSFW SKLEVTFNLR bmy_17567T0/1-976 RPGKSSADVR ALTYCDLHKI QRADLLEVLD MYPAFADSFW SKLEVTFNLR ENSTTRP00000001573/1-996 RPGKSSADVR ALTYCDLHKI QRADLLEVLD MYPAFADSFW SKLEVTFNLR 751 800 ENSP00000463533/1-994 DA-------- AGGLHSSPRQ AP-----GSQ DH-QGFFLSD NQSGS----- BACU006135/1-1278 DGTSRKDPAL GEGQQPGAIR WPRCSVAGLQ GKRDVVPMAW DICIPWVPPS ENSBTAP00000022102/1-905 DA-------- GGGLQSSPQQ AP-----GSQ DHQQGFFLSD NQS------- bmy_17567T0/1-976 DA-------- GGGLQSSPQQ AP-----GSQ DH-QGFFLSD NQS------- ENSTTRP00000001573/1-996 DA-------- GEGLQSSPQQ AP-----GSQ DH-QGFFLSD NQSAT----- 801 850 ENSP00000463533/1-994 ---PHELGPQ FPSKGYSLLG PGSQNSMGAG PCAPGHPDAA PPLSISDASG BACU006135/1-1278 LMVPGRLGPQ PPSQGYSLLG PRSQTSVGAG PRTSGHPGAA PSLSISDASG ENSBTAP00000022102/1-905 ---------- ---------- ---------- -------GAA PSLSISDASG bmy_17567T0/1-976 ---------- ---------- ---------- -------GAA PSLSISDASG ENSTTRP00000001573/1-996 ---HPRLGPQ APSQGYSLLG PRSQTSMGVG PRTSGRPGAA PSLSISDASG 851 900 ENSP00000463533/1-994 LWPELLQEMP PR--HSPQSP QEDPDCWPLK LGSRLEQLQA QMNRLESRVS BACU006135/1-1278 LWPELLQQVP PRPSQSPPNP QGDPDCWPRE LGSRLEQLQA QMNRLESRMS ENSBTAP00000022102/1-905 LWPELLQQVP PRPNQSPQNP QGDSDCWPRE LGSRLEQLQA QMNRLESRMS bmy_17567T0/1-976 LWPELLQQVP PRPSQSPPNP QGDPDCWPRE LGSRLEQLQA QMNRLESRMS ENSTTRP00000001573/1-996 RWPELLQQVP PRPSQSPPNP QGDPDCWPRE LGSRLEQLQA QMNRLESRMS 901 950 ENSP00000463533/1-994 SDLSRILQLL QKPMPQGHAS YILEAPASND LALVPIASET TSPGPR-LPQ BACU006135/1-1278 SDLSRILQLL QQPPPQDHTG YILGAPASND LALSPATSAT QSPGTR-LPQ ENSBTAP00000022102/1-905 SDLSRILKLL QQPLPQDHTG YILGASTSND LALFPATSAT QSPGTR-LPR bmy_17567T0/1-976 SDLSRILQLL QQPPPQDHTG YILGAPASND LALSPATPAT QSPGTR-LPQ ENSTTRP00000001573/1-996 SDLSRILQLL QQPPPQDHTG YILGAPASND LALSPSTSAT QSPGTRLLPQ 951 1000 ENSP00000463533/1-994 GFLPPAQTPS YGDLDDCSPK HRNSSPRMPH LAVATDKTLA PSSEQEQPEG BACU006135/1-1278 GDLPPAQAPS YGDLDEWRPK LGNSSSRMLA PATEMDKTAT LSSEQKQPEG ENSBTAP00000022102/1-905 GDPPPAQMPS YGDMDEWRPE LRNSSSRMPP SAVEMDRTLT LSSEQKQPEG bmy_17567T0/1-976 GDLPAAQAPS YGDLDEWRPK LGNSSSRMLA PATEMDKTAT LSSEKKQPEG ENSTTRP00000001573/1-996 GDLPPAQAPS YGDLDEWRPK LGNSSSRMLA PATEMDKTTT PSSEQKQPEG 1001 1050 ENSP00000463533/1-994 LWPPLASPLH PLEVQGLI-- ---------- -------CGP C--------- BACU006135/1-1278 LLSPLASPLH PLESGEAVGN SSCSGEVRAA RCRPDPLCGP AAATMSLHGK ENSBTAP00000022102/1-905 LLSPLASPLC PLEVQGLV-- ---------- -------CGP R--------- bmy_17567T0/1-976 LLSPLASPLH PLEVQGLV-- ---------- -------CGP R--------- ENSTTRP00000001573/1-996 LPSPLASPLH PLEVQGLV-- ---------- -------CGP H--------- 1051 1100 ENSP00000463533/1-994 ---------- ---------- ---------- ---------- ---------- BACU006135/1-1278 RKEIYKYEAP WTVYAMNWSV RPDKRFRLAL GSFVEEYNNK VQLVGLDEES ENSBTAP00000022102/1-905 ---------- ---------- ---------- ---------- ---------- bmy_17567T0/1-976 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001573/1-996 ---------- ---------- ---------- ---------- ---------- 1101 1150 ENSP00000463533/1-994 ---------- --FSS----- LPEHLGSVPK QL-------- ---------- BACU006135/1-1278 SEFICRNTFD HPYPTTKLMW IPDTKGVYPD LLATSGDYLR VWRVGETETR ENSBTAP00000022102/1-905 ---------- --YPS----- LPEHLSSVPK QL-------- ---------- bmy_17567T0/1-976 ---------- --FPS----- LPEHLSSVPK ---------- ---------- ENSTTRP00000001573/1-996 ---------- --FPS----- LPEHLSSVPK -L-------- ---------- 1151 1200 ENSP00000463533/1-994 ---------- ---------- ---------- ---------- ---------- BACU006135/1-1278 LECLLNNNKN SDFCAPLTSF DWNEVDPYLL GTSSIDTTCT IWGLETGQVL ENSBTAP00000022102/1-905 ---------- ---------- ---------- ---------- ---------- bmy_17567T0/1-976 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001573/1-996 ---------- ---------- ---------- ---------- ---------- 1201 1250 ENSP00000463533/1-994 ---------- ---------- ----DFQRHG SDPGFAGSWG H--------- BACU006135/1-1278 GRVNLVSGHV KTQLIAHDKE VYDIAFSRAG GGRDMFASVG ADGSVRMFDL ENSBTAP00000022102/1-905 ---------- ---------- ----EFQRHG SDPGFSRS-- ---------- bmy_17567T0/1-976 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001573/1-996 ---------- ---------- ----EFRRHG SDPGFVRSSH C--------- 1251 1300 ENSP00000463533/1-994 ---------- ---------- ---------- ---------- ---------- BACU006135/1-1278 RHLEHSTIIY EDPQHHPLLR LCWNKQDPNY LATMAMDGME VVILDVRVPC ENSBTAP00000022102/1-905 ---------- ---------- ---------- ---------- ---------- bmy_17567T0/1-976 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001573/1-996 ---------- ---------- ---------- ---------- ---------- 1301 1350 ENSP00000463533/1-994 ---------- ---------- ---------- ---------- ---------- BACU006135/1-1278 TPVARLNNHR ACVNGIAWAP HSSCHICTAA DDHQALIWDI QQMPRAIEDP ENSBTAP00000022102/1-905 ---------- ---------- ---------- ---------- ---------- bmy_17567T0/1-976 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001573/1-996 ---------- ---------- ---------- ---------- ---------- 1351 1400 ENSP00000463533/1-994 ---------- ---------- ---------- ------ BACU006135/1-1278 ILAYTAEGEI NNVQWASTQP DWIAICYNNC LEILRV ENSBTAP00000022102/1-905 ---------- ---------- ---------- ------ bmy_17567T0/1-976 ---------- ---------- ---------- ------ ENSTTRP00000001573/1-996 ---------- ---------- ---------- ------