KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:16 2014 Check: 00 .. Name: bmy_19906T0/1-370 Len: 569 Check: 619 Weight: 1.00 Name: ENSP00000264318/1-554 Len: 569 Check: 2931 Weight: 1.00 Name: ENSBTAP00000022141/1-555 Len: 569 Check: 5092 Weight: 1.00 Name: BACU019173/1-555 Len: 569 Check: 996 Weight: 1.00 Name: ENSTTRP00000006084/1-555 Len: 569 Check: 1939 Weight: 1.00 // 1 50 bmy_19906T0/1-370 ---------- ---------- ---------- --------MH RKSCRN---- ENSP00000264318/1-554 MVSAKKVPAI ALSAGVSFAL LRFLCLAVCL NESPGQNQKE EKLCTENFTR ENSBTAP00000022141/1-555 MVSAKKVPAI AMSFGVSFAL LHFLCLAACL NESPGQNQKE EKLCPENFTR BACU019173/1-555 MVSAKKVPAI ATSFGASFAL LHFLCLAACL NESPGQNQKE EKLCPENFTR ENSTTRP00000006084/1-555 MVSAKKVPAI ATSFGASFTL LHFLCLAACL NESPGQNQKE EKLCPENFTR 51 100 bmy_19906T0/1-370 VVQKLLMKQN GR------GP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR ENSP00000264318/1-554 ILDSLLDGYD NRLRPGFGGP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR ENSBTAP00000022141/1-555 ILDSLLDGYD NRLRPGFGGP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR BACU019173/1-555 ILDSLLDGYD NRLRPGFGGP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR ENSTTRP00000006084/1-555 ILDSLLDGYD NRLRPGFGGP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR 101 150 bmy_19906T0/1-370 QTWIDKRLKY DGPIEILRLN NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK ENSP00000264318/1-554 QTWIDKRLKY DGPIEILRLN NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK ENSBTAP00000022141/1-555 QTWIDKRLKY DGPIEILRLN NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK BACU019173/1-555 QTWIDKRLKY DGPIEILRLN NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK ENSTTRP00000006084/1-555 QTWIDKRLKY DGPIEILRLN NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK 151 200 bmy_19906T0/1-370 LFRIMRNGTI LYTMRLTISA ECPMRLVDFP MDGHACPLKF GSYAYPKSEM ENSP00000264318/1-554 LFRIMRNGTI LYTMRLTISA ECPMRLVDFP MDGHACPLKF GSYAYPKSEM ENSBTAP00000022141/1-555 LFRIMRNGTI LYTMRLTISA ECPMRLVDFP MDGHACPLKF GSYAYPKSEM BACU019173/1-555 LFRIMRNGTI LYTMRLTISA ECPMRLVDFP MDGHACPLKF GSYAYPKSEM ENSTTRP00000006084/1-555 LFRIMRNGTI LYTMRLTISA ECPMRLVDFP MDGHACPLKF GSYAYPKSEM 201 250 bmy_19906T0/1-370 IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT GEYIVMTVYF ENSP00000264318/1-554 IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT GEYIVMTVYF ENSBTAP00000022141/1-555 IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT GEYIVMTVYF BACU019173/1-555 IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT GEYIVMTVYF ENSTTRP00000006084/1-555 IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT GEYIVMTVYF 251 300 bmy_19906T0/1-370 HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV FVTIKYFVSL ENSP00000264318/1-554 HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV F--------- ENSBTAP00000022141/1-555 HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV F--------- BACU019173/1-555 HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV F--------- ENSTTRP00000006084/1-555 HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV F--------- 301 350 bmy_19906T0/1-370 LFCFEGITTV LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE ENSP00000264318/1-554 -----GITTV LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE ENSBTAP00000022141/1-555 -----GITTV LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE BACU019173/1-555 -----GITTV LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE ENSTTRP00000006084/1-555 -----GITTV LTMTTLSISA RHSLPKVSYA TAMDWFIAVC FAFVFSALIE 351 400 bmy_19906T0/1-370 FAAVNYFTNV QTEKAKRKTS KAPQEIPAAP VLREKHPEAP LQ-------- ENSP00000264318/1-554 FAAVNYFTNI QMEKAKRKTS KPPQEVPAAP VQREKHPEAP LQNTNANLNM ENSBTAP00000022141/1-555 FAAVNYFTNV QMEKAKRKTS KAPQEISAAP VLREKHPETP LQNTNANLSM BACU019173/1-555 FAAVNYFTNV QMEKAKRKTS KAPQEIPAAP VLREKHPEAP LQNSNANLNM ENSTTRP00000006084/1-555 FAAVNYFTNV QMAKAKRKTS KAPQEIPAAP VLREKHPEAP LQNSNANLNM 401 450 bmy_19906T0/1-370 ---------- ---------- ---------- ---------- ---------- ENSP00000264318/1-554 RKRTNALVHS ESDVGNRTEV GNHSSKSSTV VQESSKGTPR SYLASSPNPF ENSBTAP00000022141/1-555 RKRANALVHS ESDVGSRTDV GNHSSKSSTV VQGSSEATPQ SYLASSPNPF BACU019173/1-555 RKRANALVHS ESDVGNRTEV GNHSSKSSTV VQGSSEATPQ SYLASSPNPF ENSTTRP00000006084/1-555 RKRANALVHS ESDVGNRTEV GNHSSKSSTV VQGSSEATPQ SYLASSPNPF 451 500 bmy_19906T0/1-370 ----VFDLIS ---------- ---------- ---------- ---FSLRFQR ENSP00000264318/1-554 SRANAAETIS AARALPSASP -TSIRTGYMP RKASVGSAST RHVFGSRLQR ENSBTAP00000022141/1-555 SRANAAETIS AARAIPSALP STPSRTGYVP RQVPVGSAST QHVFGSRLQR BACU019173/1-555 SQANAAETIS AARAIPFAPP STPSRTGYVP RQVPVGSAST RHVFGSRLER ENSTTRP00000006084/1-555 SHANAAETIS AARAIPPASP PPPSRTGYVP RKVPVGSAST QHVFGSRLER 501 550 bmy_19906T0/1-370 LGQ------- ---------- ---------- ---------- ---------- ENSP00000264318/1-554 IKTTVNTIGA TGKLSATPPP SAPPPSGSGT SKIDKYARIL FPVTFGAFNM ENSBTAP00000022141/1-555 IKTTVNSIGT SGKLSATTTP SAPPPSGSGT SKIDKYARIL FPVTFGAFNM BACU019173/1-555 IKTTVNSIGA SGKLSATTAP LAPPPSGSGT SKIDKYARIL FPVTFGAFNM ENSTTRP00000006084/1-555 IKTTVNSIGA SGKLSATTAP SAPPPSGSGT SKIDKYARIL FPVTFGAFNM 551 600 bmy_19906T0/1-370 ----ICIAGE KLRS----- ENSP00000264318/1-554 VYWVVYLSKD TMEKSESLM ENSBTAP00000022141/1-555 VYWVVYLSKD TMEKSESLM BACU019173/1-555 VYWVVYLSKD TMEKSESLM ENSTTRP00000006084/1-555 VYWVVYLSKD TMEKSESLM