KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:20 2014 Check: 00 .. Name: bmy_21504T0/1-478 Len: 478 Check: 1081 Weight: 1.00 Name: ENSP00000414558/1-342 Len: 478 Check: 879 Weight: 1.00 Name: ENSBTAP00000022154/1-342 Len: 478 Check: 2741 Weight: 1.00 Name: BACU020219/1-335 Len: 478 Check: 4968 Weight: 1.00 Name: ENSTTRP00000013769/1-342 Len: 478 Check: 2354 Weight: 1.00 // 1 50 bmy_21504T0/1-478 MGWLSSTRQG LFTMADDLEQ HKAESISVSS FASECLRVSL SQASRLAEQL ENSP00000414558/1-342 ---------- ---MADDLEQ ---------- ---------- ---------- ENSBTAP00000022154/1-342 ---------- ---MADDLEQ ---------- ---------- ---------- BACU020219/1-335 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013769/1-342 ---------- ---MADDLEQ ---------- ---------- ---------- 51 100 bmy_21504T0/1-478 AAHLAPHFHV SAEECGSQDP PVAPPTPPSS YQTRSLGHIS PYSSYDLPRP ENSP00000414558/1-342 ---------- ---------- ---------- ---QSQGWLS SW----LP-- ENSBTAP00000022154/1-342 ---------- ---------- ---------- ---QPQGWLS SW----LP-- BACU020219/1-335 ---------- ---------- ---------- ---RPQGWLS SW----LP-- ENSTTRP00000013769/1-342 ---------- ---------- ---------- ---QPQGWLS SW----LP-- 101 150 bmy_21504T0/1-478 VATAPAMAAL SLMGWDKYNH RRATVFKPFK LSGIQVTSPW QLCHVTAFTP ENSP00000414558/1-342 ---------- ---------- ---------- --------TW RPTSMSQLKN ENSBTAP00000022154/1-342 ---------- ---------- ---------- --------TW RPTSMSQLKN BACU020219/1-335 ---------- ---------- ---------- --------TW RPTSMSQLKN ENSTTRP00000013769/1-342 ---------- ---------- ---------- --------AW RPTSMSQLKN 151 200 bmy_21504T0/1-478 AEQALPTLVC PKEGPGSTLP DTLSLQNKFL ARYVSLPNQN KIWTVTVSPE ENSP00000414558/1-342 VEARI--LQC ---------- ----LQNKFL ARYVSLPNQN KIWTVTVSPE ENSBTAP00000022154/1-342 VEARI--LQC ---------- ----LQNKFL ARYVSLPNQN KIWTVTVSPE BACU020219/1-335 VEARI--LQC ---------- ----LQNKFL ARYVSLPNQN KIWTVTVSPE ENSTTRP00000013769/1-342 VEARI--LQC ---------- ----LQNKFL ARYVSLPNQN KIWTVTVSPE 201 250 bmy_21504T0/1-478 LRDRTPLVMV HGFGGGVGLW ILNMDSLSAR RTLHTFDLLG FGRSSRPTFP ENSP00000414558/1-342 QNDRTPLVMV HGFGGGVGLW ILNMDSLSAR RTLHTFDLLG FGRSSRPAFP ENSBTAP00000022154/1-342 LRDRTPLVMV HGFGGGVGLW ILNMDSLSTR RTLHTFDLLG FGRSSRPTFP BACU020219/1-335 LRDRTPLVMV HGFGGGVGLW ILNMDSLSAR RTLHTFDLLG FGRSSRPAFP ENSTTRP00000013769/1-342 LRDRTPLVMV HGFGGGVGLW ILNMDSLSAR RTLHTFDLLG FGRSSRPTFP 251 300 bmy_21504T0/1-478 RDPEGAEDEF VTSIETWRET MGIPSMILLG HSLGGFLATS YSIKYPDRVK ENSP00000414558/1-342 RDPEGAEDEF VTSIETWRET MGIPSMILLG HSLGGFLATS YSIKYPDRVK ENSBTAP00000022154/1-342 RDPEGAEDEF VTSIETWRES MGIPSMILLG HSLGGFLATS YSIKYPDRVK BACU020219/1-335 RDPEGAEDEF VTSIETWRET MEIPSMILLG HSLGGFLATS YSIKYPDRVK ENSTTRP00000013769/1-342 RDPEGAEDEF VTSIETWRET MGIPSMILLG HSLGGFLATS YSIKYPDRVK 301 350 bmy_21504T0/1-478 HLILVDPWGF PLRPTDPSQI RAPPTWVKAV ASVLGRSNPL AVLRVAGPWG ENSP00000414558/1-342 HLILVDPWGF PLRPTNPSEI RAPPAWVKAV ASVLGRSNPL AVLRVAGPWG ENSBTAP00000022154/1-342 HLILVDPWGF PLRPADPSQV RAPPTWVKAV ASVLGRSNPL AVLRVAGPWG BACU020219/1-335 HLILVDPWGF PLRPTDPSQI RAPPTWVKAV ASVLGRSNPL AVLRVAGPWG ENSTTRP00000013769/1-342 HLILVDPWGF PLRPTDPSQI RAPPTWVKAV ASVLGRSNPL AVLRVAGPWG 351 400 bmy_21504T0/1-478 PSLVQRFRPD FKRKFADFFD DDTISEYIYH CNAQNPSGET AFKTMMESFG ENSP00000414558/1-342 PGLVQRFRPD FKRKFADFFE DDTISEYIYH CNAQNPSGET AFKAMMESFG ENSBTAP00000022154/1-342 PGLVQRFRPD FKRKFADFFD DDTISEYIYH CNAQNPSGET AFKAMMESFG BACU020219/1-335 PSLVQRFRPD FKRKFADFFD DDTISEYIYH CNAQNPSGET AFKTMMESFG ENSTTRP00000013769/1-342 PSLVQRFRPD FKRKFADFFD DDTISEYIYH CNAQNPSGET AFKTMMESFG 401 450 bmy_21504T0/1-478 WARRPMLERI HLIQKEMPIT MIYGANTWID TSTGKKVKLQ RPDSYVRDME ENSP00000414558/1-342 WARRPMLERI HLIRKDVPIT MIYGSDTWID TSTGKKVKMQ RPDSYVRDME ENSBTAP00000022154/1-342 WARRPMLERI HLIRKDVPIT MIYGANTWID TSTGKKVKLQ RPDSYVRDLE BACU020219/1-335 WARRPMLERI HLIQKEMPIT MIYGANTWID TSTGKKVKLQ RPDSYVRDME ENSTTRP00000013769/1-342 WARRPMLERI HLIQKEMPIT MIYGANTWID TSTGKKVKLQ RPDSYVRDME 451 500 bmy_21504T0/1-478 IEGASHHVYA DQPHIFNAVV EEICDSVD ENSP00000414558/1-342 IKGASHHVYA DQPHIFNAVV EEICDSVD ENSBTAP00000022154/1-342 IEGASHHVYA DQPHIFNAVV EEICDSVD BACU020219/1-335 IEGASHHVYA DQPHIFNAVV EEICDSVD ENSTTRP00000013769/1-342 IEGASHHVYA DQPHIFNAVV EEICDSVD