KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:16:20 2014 Check: 00 .. Name: ENSBTAP00000022157/1-320 Len: 423 Check: 2312 Weight: 1.00 Name: BACU007533/1-389 Len: 423 Check: 9953 Weight: 1.00 Name: bmy_08972T0/1-203 Len: 423 Check: 2216 Weight: 1.00 Name: ENSTTRP00000005325/1-359 Len: 423 Check: 4616 Weight: 1.00 // 1 50 ENSBTAP00000022157/1-320 ---------- ---------- ---------- ---------- GPVGLHNIGQ BACU007533/1-389 ---------- ---------- ---------- ----MRALPG SPVGLHNIGQ bmy_08972T0/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005325/1-359 MGMFRVPRPV LASQRFSAKP EKDGSSNGKR HREPRARAPN GPVGLHNIGQ 51 100 ENSBTAP00000022157/1-320 TCCLNSLIQV LVRNVGFAKI LKRITVPGGA EEQRRSVPFQ LLLLLEKMQD BACU007533/1-389 TCCLNSLIQV FVMNMEFTKI LKRITVPRGA EERRRSVPFQ LLLLLEKMQD bmy_08972T0/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005325/1-359 TCCLNSLIQV FVMNVEFTKI LKRMTVPRGA AEQRRSVPFQ LLLLLEKMQD 101 150 ENSBTAP00000022157/1-320 SRKKAVQPTE LAYCLQKYNI PMFVQHDAAQ LYLTVWNLIK NQITDVDLVA BACU007533/1-389 SREKAVQPMG LAYCLQTYSV PLFVQHDAAQ LYLTVWNLIK DQITDVDLVA bmy_08972T0/1-203 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005325/1-359 SREKAVRPMG LAYCLQMYSV PLFVQHDAAQ LYLTVWN-IK DQITDVDLVA 151 200 ENSBTAP00000022157/1-320 RLQALYTIRL KESFVCLECT SEMSRNSSML ALPLSVFDMH WKPLKTLEDA BACU007533/1-389 RLQALYAMRV RESLVCLGCT VESDRSSSML TLPVSLFDMD SKPLKTLEDA bmy_08972T0/1-203 -------MRV RESLVCLGCT VESDRSSSML TLPVSLFDVD SKPLKTLEDA ENSTTRP00000005325/1-359 RLQALYAIRV RESLVCLGCT MESDRSSSML TLPVSLFDMD SKPLKTLEDA 201 250 ENSBTAP00000022157/1-320 LHCFFQPQEL SSKDKCFCES CGRKTLWKQV LTLTHLPQTL TIHLMRFSIR BACU007533/1-389 LRCFFQPREL SSADKCFCGN CEKKTCWKQV LTLTHLPQTL TIHLMRFSSK bmy_08972T0/1-203 LRCFFQPREL SSADKCFCGN CEKKTCWKQV LTLTHLPQTL TIHLMRFSSK ENSTTRP00000005325/1-359 LRCFFQPREL SSEDMCFCGN CEKKTCWKQV LTLTHLPQTL TIHLMRFSSK 251 300 ENSBTAP00000022157/1-320 NLRAEKVCHS LYFPQNLDLT KLLETKGEPC SAEEQCGGHY ELFAVIAHVG BACU007533/1-389 NLRTEKICHS LCFPQNLDLN KLLEMEGEPC AAEEQHGGQY ELFAVIAHVG bmy_08972T0/1-203 NLRTEKVCHS LCFPQNLDLN KLLEMEGEPC AAEEQHGGQY ELFAVIAHVG ENSTTRP00000005325/1-359 NLRTEKICHS LCFPQNLDLN KLLEMEGEPC AAEEQRGGQY ELFAVIAHVG 301 350 ENSBTAP00000022157/1-320 NADYGHYCAY IRSSEDGEWF CFNDSNVSWV SWEDVQCTYG NHSYRWRETA BACU007533/1-389 KADFGHYCAY VRSSVNGKWF CFNDSNVCWV SWEDVQCTYG DHSYRWSETC bmy_08972T0/1-203 KADFGHYCAY VRSSVNGKWF CFNDSNVCWV SWEDVQCTYG DHSYRWRETA ENSTTRP00000005325/1-359 KADFGHYCAY VRSSVNGKWF CFNDSNVCWV SWEDVQCTYG DHSYRWRETA 351 400 ENSBTAP00000022157/1-320 ---------- ---------- -------YLL FYVKTES--- ---------- BACU007533/1-389 LTTGMKTLAP SGTTAIPQNK RAFPSTGHWL HQLHTRAAGA MVLAELCHSN bmy_08972T0/1-203 ---------- ---------- -------YLL VYMKIES--- ---------- ENSTTRP00000005325/1-359 ---------- ---------- -------YLL VYMKIES--- ---------- 401 450 ENSBTAP00000022157/1-320 ---------- ---------- --- BACU007533/1-389 EGKSVMHGMT ENFDQLPWAP QRQ bmy_08972T0/1-203 ---------- ---------- --- ENSTTRP00000005325/1-359 ---------- ---------- ---