KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:23 2014 Check: 00 .. Name: ENSP00000367239/1-349 Len: 349 Check: 4154 Weight: 1.00 Name: ENSTTRP00000000404/1-348 Len: 349 Check: 1459 Weight: 1.00 Name: ENSBTAP00000022174/1-349 Len: 349 Check: 4761 Weight: 1.00 Name: bmy_04742T0/1-233 Len: 349 Check: 3953 Weight: 1.00 Name: BACU017217/1-349 Len: 349 Check: 6461 Weight: 1.00 // 1 50 ENSP00000367239/1-349 MSSLSGKVQT VLGLVEPSKL GRTLTHEHLA MTFDCCYCPP PPCQEAISKE ENSTTRP00000000404/1-348 MFSLSGKVQT VLSLVGPSKL GCTLTHEHLT MTFDCSYYPP PLCREVISNE ENSBTAP00000022174/1-349 MSSLSGKVQT VLGLVEPGTL GRTLTHEHLT MTFDCCYYPP PPSHEAISKE bmy_04742T0/1-233 MSSLSGKVQT VLGLVEPSKL GRTLTHEHLT MTFDCSYYPP PPCHEVISNE BACU017217/1-349 MSSLSGQVQT VLGLVEPSKL GRTLTHEHLT MTFDCSYYPP PPCHEVISNE 51 100 ENSP00000367239/1-349 PIVMKNLYWI QKNAYSHKEN LQLNQETEAI KEELLYFKAN GGGALVENTT ENSTTRP00000000404/1-348 PITMKNLFWI QKNPYSHREN LQLNQETEGI KEELLDFKAQ GGGALVENTA ENSBTAP00000022174/1-349 PIIMKNLFWI QKNPYSHKEN LQLNQETEAI KEELLDFKAK GGGALVENTT bmy_04742T0/1-233 PITMKNLFWI QKNPYSHREN LQLNQETEAV KEELLDFKAK GGGALVENTT BACU017217/1-349 PITMKNLFWI QKNPYSHREN LQLNQETEAV KEELLDFKAK GGGALVENTT 101 150 ENSP00000367239/1-349 TGISRDTQTL KRLAEETGVH IISGAGFYVD ATHSSETRAM SVEQLTDVLM ENSTTRP00000000404/1-348 TGIS-DVQTL KRFAEETGVH ITSGTGFYVD VTRSSETRAM SVEQLTDVLV ENSBTAP00000022174/1-349 TGLSRDVRTL KWLAEETGVH IIAGAGFYVD ATHSSETRAK SVEQLTDVLV bmy_04742T0/1-233 TGISRDVQTL KRLAEETGVH IISGAGFYVD ATHSSETRAM SVEQLTDVLV BACU017217/1-349 TGISRDVQTL KRLAEETGVH IISGAGFYVD ATHSSETRAM SVEQLTDVLV 151 200 ENSP00000367239/1-349 NEILHGADGT SIKCGIIGEI GCSWPLTESE RKVLQATAHA QAQLGCPVII ENSTTRP00000000404/1-348 NEILHGADGT SIKCGVIGET GCSWPLTESE RKVLQATAHA QAQLGCPVII ENSBTAP00000022174/1-349 NEILCGADGT SIKCGVIGEI GCSWPLTDSE RKVLQATAHA QTQLGCPVII bmy_04742T0/1-233 NEILHGADGT SIKCGVIGEI GCSWPLTESE RKVLQATAHA QAKLGCPVII BACU017217/1-349 NEILHGADGT SIKCGVIGEI GCSWPLTESE RKVLQATAHA QTKLGCPVII 201 250 ENSP00000367239/1-349 HPGRSSRAPF QIIRILQEAG ADISKTVMSH LDRTILDKKE LLEFAQLGCY ENSTTRP00000000404/1-348 HPGRNRSAPF QIIRVLQEAG ADTSKTVMSH LDXXXXXXXX XXXXXXXXXX ENSBTAP00000022174/1-349 HPGRNQSAPF QIIRVLQEAG GDISKTVMSH IDRTILDKKE LLEFAQFGCY bmy_04742T0/1-233 HPGRNRSAPF QIIRVLQEAG ADISKTVMSH LDR------- ---------- BACU017217/1-349 HPGRNRSAPF QIIRVLQEAG ADISKTVMSH LDRTLLDKRE LLEFAQLGCY 251 300 ENSP00000367239/1-349 LEYDLFGTEL LHYQLGPDID MPDDNKRIRR VRLLVEEGCE DRILVAHDIH ENSTTRP00000000404/1-348 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX VRLLVDEGYE GRILIAHDIH ENSBTAP00000022174/1-349 LEYDLFGTEL FHYQFNPDID MPNDNKRIKR VRLLVDEGYE DRILMAHDIH bmy_04742T0/1-233 ---------- ---------- ---------- ---------- ---------- BACU017217/1-349 LEYDLFGSEL FHYQFNPDID MPNDNKRIKR VRLLVDEGYE DRILMAHDIH 301 350 ENSP00000367239/1-349 TKTRLMKYGG HGYSHILTNV VPKMLLRGIT ENVLDKILIE NPKQWLTFK ENSTTRP00000000404/1-348 TKHRLTKYGG HGYSHIPTNI VPKMLFRGIT EAALDKILIE NPKQWLTFK ENSBTAP00000022174/1-349 TKNRLTKYGG HGYSHILTNI VPKMLLRGIT EGALDKILIE NPKQWLTFK bmy_04742T0/1-233 ---------- ---------- ---------- ---------- --------- BACU017217/1-349 TKHRLTKYGG HGYSHILTNI VPKMLSRGIT EAALDKILIE NPKQWLTFK