KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:16:23 2014 Check: 00 .. Name: ENSTTRP00000015420/1-615 Len: 636 Check: 4778 Weight: 1.00 Name: ENSP00000426638/1-617 Len: 636 Check: 6214 Weight: 1.00 Name: ENSBTAP00000022178/1-617 Len: 636 Check: 5313 Weight: 1.00 Name: bmy_19031T0/1-577 Len: 636 Check: 661 Weight: 1.00 Name: BACU020424/1-608 Len: 636 Check: 7442 Weight: 1.00 // 1 50 ENSTTRP00000015420/1-615 MQVPLARLAC PAYQCFHALQ IKKNYLPLCA TRWSSTSTVP RITTHYTVHP ENSP00000426638/1-617 MLVPLAKLSC LAYQCFHALK IKKNYLPLCA TRWSSTSTVP RITTHYTIYP ENSBTAP00000022178/1-617 MQVLLARLAC PVYQCFHAIK IKKNYLPLCA TRWSSTSVVP RITTHYTVYP bmy_19031T0/1-577 ---------- ---------- MKKKYLPLCA ARWSSTSAVP RITTHYTVHP BACU020424/1-608 ---------C TANQCFHALQ IKKTYLPLCA ARWSSTSAVP RITTHYTVHP 51 100 ENSTTRP00000015420/1-615 RDKDKRWEGV NMERFADEAD VVIVGAGPAG LSAAARLKQL AAQHEKDIRV ENSP00000426638/1-617 RDKDKRWEGV NMERFAEEAD VVIVGAGPAG LSAAVRLKQL AVAHEKDIRV ENSBTAP00000022178/1-617 RDQDKRWEGV NMERFAEEAD VVIVGAGPAG LSAAARLKQL AAQHEKDIRV bmy_19031T0/1-577 RDKDKRWEGV NMERFADEAD VVIVGAGPAG LSAAARLKQL AAQHEKDIRV BACU020424/1-608 RDKDKRWEGV NMERFADEAD VVIVGAGPAG LSAAARLKQL AAQHEKDIRV 101 150 ENSTTRP00000015420/1-615 CLVEKAAQIG THTLSGACLD PRALQELFPD WKEKGAPLNT PVTEDRFGFL ENSP00000426638/1-617 CLVEKAAQIG AHTLSGACLD PGAFKELFPD WKEKGAPLNT PVTEDRFGIL ENSBTAP00000022178/1-617 CLVEKAAQIG AHTLSGACLD PRALQELFPD WKEKGAPLNT PVTEDRFGIL bmy_19031T0/1-577 CLVEKAAQIG AHTLSGACLD PRAFQELFPD WKEKGAPLNT PVTEDRFGIL BACU020424/1-608 CLVEKAAQIG AHTLSGACLD PRAFQELFPD WKEKGAPLNT PVTEDRFGIL 151 200 ENSTTRP00000015420/1-615 TEKYRIPVPI LPGLPMNNHG NYIVRLGHLV SWMGEQAEAL GVEVYPGYAA ENSP00000426638/1-617 TEKYRIPVPI LPGLPMNNHG NYIVRLGHLV SWMGEQAEAL GVEVYPGYAA ENSBTAP00000022178/1-617 TEKYRIPVPI LPGLPMNNHG NYIVRLGHLV SWMGEQAEAL GVEVYPGYAA bmy_19031T0/1-577 TEKYRIPVPI LPGLPMNNHG NYIVRLGHLV SWMGEQAEAL GVEVYPGYAA BACU020424/1-608 TEKYRIPVPI LPGLPMNNHG NYIVRLGHLV SWMGEQAEAL GVEVYPGYAA 201 250 ENSTTRP00000015420/1-615 AEILFHEDGS VKGIATNDVG IQKDGAPKT- FEXXXXXXXX XXXXXXXXXX ENSP00000426638/1-617 AEVLFHDDGS VKGIATNDVG IQKDGAPKAT FERGLELHAK VTIFAEGCHG ENSBTAP00000022178/1-617 AEVLFHEDGS VKGIATNDVG IQKDGAPKTT FERGLELHAK VTIFAEGCHG bmy_19031T0/1-577 AEVLFHEDGS VKGIATNDVG IQKDGAPKTT FERGLELHAK VTVFAEGCHG BACU020424/1-608 AEVLFHEDGS VKGVATNDVG IQKDGAPKTT FERGLELHAK VTIFAEGCHG 251 300 ENSTTRP00000015420/1-615 XXXXXXXXXX XXXXXXXXXX XXXXXXXLWI IDEKKWKPGR VDHTVGWPLD ENSP00000426638/1-617 HLAKQLYKKF DLRANCEPQT YGIGLKELWV IDEKNWKPGR VDHTVGWPLD ENSBTAP00000022178/1-617 HLAKQLYRKF DLRANCEPQT YGIGLKELWV IDEKKWKPGR VDHTVGWPLD bmy_19031T0/1-577 HLAKQLYRRF DLRASCEPQT YGIGLKELWI IDEKKWKPGR VDHTVGWPLD BACU020424/1-608 HLAKQLYRRF DLRASCEPQT YGIGLKELWI IDEKKWKPGR VDHTVGWPLD 301 350 ENSTTRP00000015420/1-615 RHTYGGSFLY HLNEGEPLVA LGFVVGLDYQ NPYLSPFREF QRWKHHPSIQ ENSP00000426638/1-617 RHTYGGSFLY HLNEGEPLVA LGLVVGLDYQ NPYLSPFREF QRWKHHPSIR ENSBTAP00000022178/1-617 RHTYGGSFLY HLNEGEPLVA LGFVVGLDYQ NPYLSPFREF QRWKHHPSIQ bmy_19031T0/1-577 RHTYGGSFLY HLNEGEPLVA LGFVMHFDCF SP-------- ---------- BACU020424/1-608 RHTYGGSFLY HLNEGEPLVA LGFVVGLDYQ NPYLSPFREF QRWKHHPSIQ 351 400 ENSTTRP00000015420/1-615 PTLEGGKRVA YGARALNEGG FQSIPKLTFP GGLLIGCSPG FMNVPKIKGT ENSP00000426638/1-617 PTLEGGKRIA YGARALNEGG FQSIPKLTFP GGLLIGCSPG FMNVPKIKGT ENSBTAP00000022178/1-617 PTLEGGKRIA YGARALNEGG LQCIPKLTFP GGLLIGCSPG FMNVPKIKGT bmy_19031T0/1-577 ---------- ---------- -QSIPKLTFP GGLLIGCSPG FMNVPKIKGT BACU020424/1-608 PTLEGGKRIA YGARALNEGG FQSIPKLTFP GGLLIGCSPG FMNVPKIKGT 401 450 ENSTTRP00000015420/1-615 HTAMKSGILA AESIFNQLSS ENLQSKTIGL DVTEYEDN-K KSWVWKELYA ENSP00000426638/1-617 HTAMKSGILA AESIFNQLTS ENLQSKTIGL HVTEYEDNLK NSWVWKELYS ENSBTAP00000022178/1-617 HTAMKSGILA AESIFNQLTN ENLQSKTIGL DVTEYEDNLK KSWVWKELYA bmy_19031T0/1-577 HTAMKSGILA AESIFNQLTS ENLQSKTIGL DVTEYEDNLK KSWVWKELYA BACU020424/1-608 HTAMKSGILA AESIFNQLTS ENLQSKTIGL DVTEYEDNLK KSWVWKELYA 451 500 ENSTTRP00000015420/1-615 IRNVRPSCHG VLGVYGGMIY TGIFYWIFRG MEPWTLKHK- ---------- ENSP00000426638/1-617 VRNIRPSCHG VLGVYGGMIY TGIFYWILRG MEPWTLKHK- ---------- ENSBTAP00000022178/1-617 VRNIRPSCHS ILGVYGGMIY TGIFYWIFRG MEPWTLKHK- ---------- bmy_19031T0/1-577 IRNVRPSCHG ILGVYGGMIY TGIFYWIFRG MEPWTLKHKG STLELDTFLL BACU020424/1-608 IRNIRPSCHG VLGVYGGMIY TGIFYWIFRG MEPWTLKHK- ---------- 501 550 ENSTTRP00000015420/1-615 --------GS DSDQLRPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH ENSP00000426638/1-617 --------GS DFERLKPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH ENSBTAP00000022178/1-617 --------GS DSDKLKPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH bmy_19031T0/1-577 KNFLKTWEGS DSDQLKPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH BACU020424/1-608 --------GS DCDQLKPAKD CTPIEYPKPD GQISFDLLSS VALSGTNHEH 551 600 ENSTTRP00000015420/1-615 DQPAHLTLKD DSVPVNRNLT IYDGPEQRFC PAGVYEFVPL EQGDGFRLQI ENSP00000426638/1-617 DQPAHLTLRD DSIPVNRNLS IYDGPEQRFC PAGVYEFVPV EQGDGFRLQI ENSBTAP00000022178/1-617 DQPAHLTLKD DSVPVNRNLS IYDGPEQRFC PAGVYEFVPV EQGDGFRLQI bmy_19031T0/1-577 DQPAHLTLKD DSVPVNRNLT IYDGPEQRFC PAGVYEFVPL EQGDGFRLQI BACU020424/1-608 DQPAHLTLKD DSVPVNRNLT IYDGPEQRFC PAGVYEFVPL EQGDGFRLQI 601 650 ENSTTRP00000015420/1-615 NAQNCVHCKT CDIKDPSQNI NWVVPEGGGG PAYNGM ENSP00000426638/1-617 NAQNCVHCKT CDIKDPSQNI NWVVPEGGGG PAYNGM ENSBTAP00000022178/1-617 NAQNCVHCKT CDIKDPSQNI NWVVPEGGGG PAYNGM bmy_19031T0/1-577 NAQNCVHCKT CDIKDPSQNI NWVVPEGGGG PAYNGM BACU020424/1-608 NAQNCVHCKT CDIKDPSQNV NWVVPEGGGG PAYNGM